Glyma.13g033600

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Report for Sequence Feature Glyma.13g033600

Feature Type:	gene_model
Chromosome:	Gm13
Start:	10575983
stop:	10578863
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.13g033600

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G51480.1	AT	SKU5 similar 2	JGI	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	EnsemblGenomes	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	JGI	N/A	IEA
GO:0005507	GO-mf	copper ion binding	EnsemblGenomes	N/A	IEA
GO:0016491	GO-mf	oxidoreductase activity	EnsemblGenomes	N/A	IEA
GO:0016491	GO-mf	oxidoreductase activity	JGI	N/A	IEA
GO:0016722	GO-mf	oxidoreductase activity, oxidizing metal ions	EnsemblGenomes	N/A	IEA
PTHR11709	Panther	MULTI-COPPER OXIDASE	JGI	N/A	IEA
PTHR11709:SF11	Panther	MULTI-COPPER OXIDASE TYPE I FAMILY PROTEIN-RELATED	JGI	N/A	IEA
PF00394	PFAM	Multicopper oxidase	JGI	N/A	IEA
GN7V-67081	SoyCyc9-rxn	L-ascorbate oxidase	Plant Metabolic Network		ISS

Proteins Associated with Glyma.13g033600

Locus	Gene Symbol	Protein Name
	Lac54	Laccase 54

Expression Patterns of Glyma.13g033600

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.13g033600 not represented in the dataset	Glyma.13g033600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.13g033600 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma13g09707	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.13g033600

Limit To All Plant Sequences

>Glyma.13g033600.1 sequence-type=CDS polypeptide=Glyma.13g033600.1.p locus=Glyma.13g033600 ID=Glyma.13g033600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTCCCCGGACCCCTTATAAATGCAACAACAAATGATAATATTCATGTCAATGTTTTCAATGATTTAGATGATCCCTTGCTGTTTACATGTTTTAGGAGTAGCACTAAACTTACACTCTATAGACATGGCAAGACATATTTGCTTAGGATATCAAACGTAGGGACAGCATGGAGCTTCAATTTCAGGATTCAAAATCATCAATTGGTTTTGGTTGAAACTAAAGGTTCTTATGTCAATCAAATAGAGTTGGAGTCTCTTGATGTTCATGTAGGCCAATCCTACTCAGTTCTTGTCACAGCAAACCAAAATGCTGCTGATTACTACATAGTAGCCTCTCCTAAACTGAGTAATGCCACAAATAATAACACTCTTGTTGGTGTTGCTGTGCTTCATTATGACAACTCTACCACACCGGCTAATGGGTCTCTTCCAAGTGGTCCAGATCCATTTGATCTGCAATTCTCCATCAACCAAGCAAAATCCATTAGGTGGAACCTCACCACTGGAGCTGCAAGGCCTAATCCCCAGGGAATGTTCCATGTAACAAATGTGACAATAATTGAAACTTTCATTCTAAATGCATCAACAACAACTATTGATGGGTTATCTCGCTACTCTGTCAACAATGTGTCTTTCTTGATCCTAGATACACCACTGAAACTAGCTGATTTCTTTTCCAATAGAACTGGTGTATATGAACTTGATGCTTTTTCTAAGAACACTTCAAATGCTAACGCCGTGCGTGGAGTTTTCGTAGCTAGTGCATTACATAAAGGTTGGACTGAGATAGTGCTAGAAAACAATTTAGACATCATTGATACTTGGCATTTGGATGTATATAGCTTCTTTGTTGTTGGGTATAATCTCTATGTGAGGGTTTATGATGTTGATCCCAACCCTGCCAAGGAGAAGCCTCCTCCACAGAATCTCCTTCTATGTGGTTAG

Predicted protein sequences of Glyma.13g033600

Limit To All Plant Sequences

>Glyma.13g033600.1.p sequence-type=predicted peptide transcript=Glyma.13g033600.1 locus=Glyma.13g033600 ID=Glyma.13g033600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFPGPLINATTNDNIHVNVFNDLDDPLLFTCFRSSTKLTLYRHGKTYLLRISNVGTAWSFNFRIQNHQLVLVETKGSYVNQIELESLDVHVGQSYSVLVTANQNAADYYIVASPKLSNATNNNTLVGVAVLHYDNSTTPANGSLPSGPDPFDLQFSINQAKSIRWNLTTGAARPNPQGMFHVTNVTIIETFILNASTTTIDGLSRYSVNNVSFLILDTPLKLADFFSNRTGVYELDAFSKNTSNANAVRGVFVASALHKGWTEIVLENNLDIIDTWHLDVYSFFVVGYNLYVRVYDVDPNPAKEKPPPQNLLLCG*

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