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Report for Sequence Feature Glyma.13g010100

Feature Type:gene_model
Chromosome:Gm13
Start:2735552
stop:2746104
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.13g010100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G04350.1AT AMP-dependent synthetase and ligase family protein JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
KOG1180 KOG Acyl-CoA synthetase JGI N/AIEA
PTHR24096Panther FAMILY NOT NAMED JGI N/AIEA
PF00501PFAM AMP-binding enzyme JGI N/AIEA
PWY-1121SoyCyc9 suberin monomers biosynthesis Plant Metabolic Network ISS
PWY-321SoyCyc9 cutin biosynthesis Plant Metabolic Network ISS
PWY-5143SoyCyc9 long-chain fatty acid activation Plant Metabolic Network ISS
PWY-5147SoyCyc9 oleate biosynthesis I (plants) Plant Metabolic Network ISS
PWY-5156SoyCyc9 superpathway of fatty acid biosynthesis II (plant) Plant Metabolic Network ISS
PWY-5971SoyCyc9 palmitate biosynthesis II (bacteria and plants) Plant Metabolic Network ISS
PWY-5989SoyCyc9 stearate biosynthesis II (bacteria and plants) Plant Metabolic Network ISS
PWY-6733SoyCyc9 sporopollenin precursors biosynthesis Plant Metabolic Network ISS
PWY-6803SoyCyc9 phosphatidylcholine acyl editing Plant Metabolic Network ISS
GN7V-57995SoyCyc9-rxn long-chain-fatty-acid-CoA ligase Plant Metabolic Network ISS

Expression Patterns of Glyma.13g010100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.13g010100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g11700 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.13g010100
>Glyma.13g010100.2 sequence-type=transcript locus=Glyma.13g010100 ID=Glyma.13g010100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TACTCGTTGTTCTATGTATGCTGGTAATCAAGGTTGTGTTTTGCTTAAGAAGGACCTCTATATCGAAACATAAAAGATGGATGATCCAAAGGGTAGTTCCTCGTGGTTAAAAAGTCTAAATATAAGTGACATATTTGGCTGGAAAGGTCATGGAGAATATGGAGCTCTGGCAGCTATAGTCATAAGCATTCTTGTTCCTGTCTTGTTTTCAGCTTTGTTCTTTGGAAAGAAAAAAGGAAAAATAAGAGGTGTGCCGGTAGAAGTTGGTGGTGAGGAATGCTTTGCAGTACGTAATGCTAGAAAAACTGAGTTGGTTGAGGTTCCTTGGAAAGGAGCCCCAACCATGGCTCATCTATTTGAGCAATCCTGTAATAAATATACCCGCAATCAATTTCTTGGAACTAGAAAAATAATACAAAAGGAGTTTGTTACATCTAGTGATGGCAGGAAGTTTGAGAAACTTCATTTAGGAGACTACGAATGGGAAACCTATGGAGAGGTATTTGCTCGTGTGTCCAATTTTGCATCTGGTCTTCTTAAATTGGGCCATAATGGAGATAGCCGTGTTGCCATTTTCTCTGATACCAGGGCTGAGTGGCTCATTGCCCTTCAGGGTTGCTTCAGGCAGAATGTAACAGTTGTTACTATTTATGCTTCTCTAGGTGAGGATGCCCTGATCCACTCACTAAATGAGACTGAAGTATCTACTCTGATCTGTGACTCCAAGCAGTCAAAGAAGTTGGATGCAATAAGATCAAGACTAACATCTTTACAAAATGTTATTTACTTTGAAGATGATAACGAAGAAGATGCTTTCTCTGGAAGTTCAAGCGGCTGGACAATTGCATCTTTTAGTGAAGTTGAGAAACTTGGGAAAGAAAGTCCTGTTGAGCCAAGCCTGCCTTCCAAGAATGCTATTGCAGTTATCATGTACACAAGTGGCAGTACAGGTCTTCCAAAGGGTGTCATGATTACTCACGGGAACATTGTAGCGACTACAGCAGCTGTTATGACAGTGATTCCAAATCTGGGTAGCAAGGATGTGTACCTGGCATACTTGCCCCTTGCTCATGTTTTTGAAATGGCAGCAGAGTCTGTTATGCTGGCTGCAGGTTGTGCAATTGGTTACGGCTCTCCTCTGACTTTGACTGACACGTCTAATAAAGTCAAGAAAGGAACCAAGGGAGATGCTACTGTGTTAAAGCCCACACTTTTGACAGCAGTACCAGCTATTCTTGATCGGATTCGAGATGGAGTTGTAAAAAAGGTTGAGCAAAAAGGGGGCCTTGTGAAGAATCTTTTCCATTTTGCATACAAGCGCCGACTGGGTGCTGTAAAAGGAAGCTGGCTAGGAGCTTGGGGATTGGAAAAGTTGATGTGGGATACCATTGTCTTTAAACAAATTCGTACTGCACTTGGAGGCCAGCTCCGGTTTATGCTTTGTGGGGGAGCTCCTTTATCTGGAGATTCACAACACTTCATCAATATCTGCATGGGGGCTCCTATTGGGCAAGGATATGGCTTGACTGAAACATTTGCTGGGGCTGCCTTCTCGGAGTGGGATGACTACAGTGTGGGACGTGTTGGTCCACCTCTTCCTTGTTGCCACATTAAGCTTGTTTCTTGGGAAGAAGGAGGGTATCTGACATCAGATAAACCAATGCCAAGGGGAGAGATTGTAGTTGGAGGATTTAGTGTGACAGCTGGTTACTTTAAGAATCAAGAAAAAACTAAAGAAGTGTTCAAGGTTGATGAGAAGGGAATGCGCTGGTTTTATACTGGCGATATTGGGCAATTCCATCCTGATGGATGTCTTGAAATCATAGATAGGAAGAAAGATATTGTCAAACTTCAACATGGAGAATATATATCTCTTGGAAAGATTGAGGCAGCACTATCATCGTGTGATCATGTGGATAATATAATGGTTTATGCAGACCCCTTTCACAATTACTGTGTGGCTCTAGTTGTTGCTTCGCATCAGTCCCTGGAGAAGTGGGCCCAACAAGCTGGTATAGATTACCAAGATTTTCCTGATCTGTGTAACAAACCTGAAACTGTCACTGAGGTTCTTCAGTCTATTTCCAAGGTTGCAAAATCTGCAAAGCTGGAGAAAACTGAAATCCCTGCAAAGATTAAGTTGCTGCCGGATCCATGGACTCCTGAATCTGGATTGGTCACTGCAGCTCTCAAGATAAAGAGAGAGCAGCTGAAAGCCAAATTCAAAGATGAGCTTCAGAAGTTGTATGCATGAAATGAAGTTTCTAACCTCTTCAATTTATGGTTGGTGTATGTTCAATGTATGTAATATGTAACAGGTCTCTTTTTTATACAATAATATTATTGAACATGTAACTAATCTGACATAATAAAATCATACTCCAAATAATACTTGGCTGTCAACATGAAATTCTTGCCAGTGAAGCCAACCAAGCGGCTAGCAATAGATATAGTTGATTTATGAGCAGTAATTTTTCTTGAAAAAAAATACTTATATACATTATGCTTTT
Coding sequences of Glyma.13g010100
>Glyma.13g010100.1 sequence-type=CDS polypeptide=Glyma.13g010100.1.p locus=Glyma.13g010100 ID=Glyma.13g010100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATGATCCAAAGGGTAGTTCCTCGTGGTTAAAAAGTCTAAATATAAGTGACATATTTGGCTGGAAAGGTCATGGAGAATATGGAGCTCTGGCAGCTATAGTCATAAGCATTCTTGTTCCTGTCTTGTTTTCAGCTTTGTTCTTTGGAAAGAAAAAAGGAAAAATAAGAGGTGTGCCGGTAGAAGTTGGTGGTGAGGAATGCTTTGCAGTACGTAATGCTAGAAAAACTGAGTTGGTTGAGGTTCCTTGGAAAGGAGCCCCAACCATGGCTCATCTATTTGAGCAATCCTGTAATAAATATACCCGCAATCAATTTCTTGGAACTAGAAAAATAATACAAAAGGAGTTTGTTACATCTAGTGATGGCAGGAAGTTTGAGAAACTTCATTTAGGAGACTACGAATGGGAAACCTATGGAGAGGTATTTGCTCGTGTGTCCAATTTTGCATCTGGTCTTCTTAAATTGGGCCATAATGGAGATAGCCGTGTTGCCATTTTCTCTGATACCAGGGCTGAGTGGCTCATTGCCCTTCAGGGTTGCTTCAGGCAGAATGTAACAGTTGTTACTATTTATGCTTCTCTAGGTGAGGATGCCCTGATCCACTCACTAAATGAGACTGAAGTATCTACTCTGATCTGTGACTCCAAGCAGTCAAAGAAGTTGGATGCAATAAGATCAAGACTAACATCTTTACAAAATGTTATTTACTTTGAAGATGATAACGAAGAAGATGCTTTCTCTGGAAGTTCAAGCGGCTGGACAATTGCATCTTTTAGTGAAGTTGAGAAACTTGGGAAAGAAAGTCCTGTTGAGCCAAGCCTGCCTTCCAAGAATGCTATTGCAGTTATCATGTACACAAGTGGCAGTACAGGTCTTCCAAAGGGTGTCATGATTACTCACGGGAACATTGTAGCGACTACAGCAGCTGTTATGACAGTGATTCCAAATCTGGGTAGCAAGGATGTGTACCTGGCATACTTGCCCCTTGCTCATGTTTTTGAAATGGCAGCAGAGTCTGTTATGCTGGCTGCAGGTTGTGCAATTGGTTACGGCTCTCCTCTGACTTTGACTGACACGTCTAATAAAGTCAAGAAAGGAACCAAGGGAGATGCTACTGTGTTAAAGCCCACACTTTTGACAGCAGTACCAGCTATTCTTGATCGGATTCGAGATGGAGTTGTAAAAAAGGTTGAGCAAAAAGGGGGCCTTGTGAAGAATCTTTTCCATTTTGCATACAAGCGCCGACTGGGTGCTGTAAAAGGAAGCTGGCTAGGAGCTTGGGGATTGGAAAAGTTGATGTGGGATACCATTGTCTTTAAACAAATTCGTACTGCACTTGGAGGCCAGCTCCGGTTTATGCTTTGTGGGGGAGCTCCTTTATCTGGAGATTCACAACACTTCATCAATATCTGCATGGGGGCTCCTATTGGGCAAGGATATGGCTTGACTGAAACATTTGCTGGGGCTGCCTTCTCGGAGTGGGATGACTACAGTGTGGGACGTGTTGGTCCACCTCTTCCTTGTTGCCACATTAAGCTTGTTTCTTGGGAAGAAGGAGGGTATCTGACATCAGATAAACCAATGCCAAGGGGAGAGATTGTAGTTGGAGGATTTAGTGTGACAGCTGGTTACTTTAAGAATCAAGAAAAAACTAAAGAAGTGTTCAAGGTTGATGAGAAGGGAATGCGCTGGTTTTATACTGGCGATATTGGGCAATTCCATCCTGATGGATGTCTTGAAATCATAGATAGGAAGAAAGATATTGTCAAACTTCAACATGGAGAATATATATCTCTTGGAAAGATTGAGGCAGCACTATCATCGTGTGATCATGTGGATAATATAATGGTTTATGCAGACCCCTTTCACAATTACTGTGTGGCTCTAGTTGTTGCTTCGCATCAGTCCCTGGAGAAGTGGGCCCAACAAGCTGGTATAGATTACCAAGATTTTCCTGATCTGTGTAACAAACCTGAAACTGTCACTGAGGTTCTTCAGTCTATTTCCAAGGTTGCAAAATCTGCAAAGCTGGAGAAAACTGAAATCCCTGCAAAGATTAAGTTGCTGCCGGATCCATGGACTCCTGAATCTGGATTGGTCACTGCAGCTCTCAAGATAAAGAGAGAGCAGCTGAAAGCCAAATTCAAAGATGAGCTTCAGAAGTTGTATGCATGA

>Glyma.13g010100.2 sequence-type=CDS polypeptide=Glyma.13g010100.2.p locus=Glyma.13g010100 ID=Glyma.13g010100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATGATCCAAAGGGTAGTTCCTCGTGGTTAAAAAGTCTAAATATAAGTGACATATTTGGCTGGAAAGGTCATGGAGAATATGGAGCTCTGGCAGCTATAGTCATAAGCATTCTTGTTCCTGTCTTGTTTTCAGCTTTGTTCTTTGGAAAGAAAAAAGGAAAAATAAGAGGTGTGCCGGTAGAAGTTGGTGGTGAGGAATGCTTTGCAGTACGTAATGCTAGAAAAACTGAGTTGGTTGAGGTTCCTTGGAAAGGAGCCCCAACCATGGCTCATCTATTTGAGCAATCCTGTAATAAATATACCCGCAATCAATTTCTTGGAACTAGAAAAATAATACAAAAGGAGTTTGTTACATCTAGTGATGGCAGGAAGTTTGAGAAACTTCATTTAGGAGACTACGAATGGGAAACCTATGGAGAGGTATTTGCTCGTGTGTCCAATTTTGCATCTGGTCTTCTTAAATTGGGCCATAATGGAGATAGCCGTGTTGCCATTTTCTCTGATACCAGGGCTGAGTGGCTCATTGCCCTTCAGGGTTGCTTCAGGCAGAATGTAACAGTTGTTACTATTTATGCTTCTCTAGGTGAGGATGCCCTGATCCACTCACTAAATGAGACTGAAGTATCTACTCTGATCTGTGACTCCAAGCAGTCAAAGAAGTTGGATGCAATAAGATCAAGACTAACATCTTTACAAAATGTTATTTACTTTGAAGATGATAACGAAGAAGATGCTTTCTCTGGAAGTTCAAGCGGCTGGACAATTGCATCTTTTAGTGAAGTTGAGAAACTTGGGAAAGAAAGTCCTGTTGAGCCAAGCCTGCCTTCCAAGAATGCTATTGCAGTTATCATGTACACAAGTGGCAGTACAGGTCTTCCAAAGGGTGTCATGATTACTCACGGGAACATTGTAGCGACTACAGCAGCTGTTATGACAGTGATTCCAAATCTGGGTAGCAAGGATGTGTACCTGGCATACTTGCCCCTTGCTCATGTTTTTGAAATGGCAGCAGAGTCTGTTATGCTGGCTGCAGGTTGTGCAATTGGTTACGGCTCTCCTCTGACTTTGACTGACACGTCTAATAAAGTCAAGAAAGGAACCAAGGGAGATGCTACTGTGTTAAAGCCCACACTTTTGACAGCAGTACCAGCTATTCTTGATCGGATTCGAGATGGAGTTGTAAAAAAGGTTGAGCAAAAAGGGGGCCTTGTGAAGAATCTTTTCCATTTTGCATACAAGCGCCGACTGGGTGCTGTAAAAGGAAGCTGGCTAGGAGCTTGGGGATTGGAAAAGTTGATGTGGGATACCATTGTCTTTAAACAAATTCGTACTGCACTTGGAGGCCAGCTCCGGTTTATGCTTTGTGGGGGAGCTCCTTTATCTGGAGATTCACAACACTTCATCAATATCTGCATGGGGGCTCCTATTGGGCAAGGATATGGCTTGACTGAAACATTTGCTGGGGCTGCCTTCTCGGAGTGGGATGACTACAGTGTGGGACGTGTTGGTCCACCTCTTCCTTGTTGCCACATTAAGCTTGTTTCTTGGGAAGAAGGAGGGTATCTGACATCAGATAAACCAATGCCAAGGGGAGAGATTGTAGTTGGAGGATTTAGTGTGACAGCTGGTTACTTTAAGAATCAAGAAAAAACTAAAGAAGTGTTCAAGGTTGATGAGAAGGGAATGCGCTGGTTTTATACTGGCGATATTGGGCAATTCCATCCTGATGGATGTCTTGAAATCATAGATAGGAAGAAAGATATTGTCAAACTTCAACATGGAGAATATATATCTCTTGGAAAGATTGAGGCAGCACTATCATCGTGTGATCATGTGGATAATATAATGGTTTATGCAGACCCCTTTCACAATTACTGTGTGGCTCTAGTTGTTGCTTCGCATCAGTCCCTGGAGAAGTGGGCCCAACAAGCTGGTATAGATTACCAAGATTTTCCTGATCTGTGTAACAAACCTGAAACTGTCACTGAGGTTCTTCAGTCTATTTCCAAGGTTGCAAAATCTGCAAAGCTGGAGAAAACTGAAATCCCTGCAAAGATTAAGTTGCTGCCGGATCCATGGACTCCTGAATCTGGATTGGTCACTGCAGCTCTCAAGATAAAGAGAGAGCAGCTGAAAGCCAAATTCAAAGATGAGCTTCAGAAGTTGTATGCATGA
Predicted protein sequences of Glyma.13g010100
>Glyma.13g010100.1.p sequence-type=predicted peptide transcript=Glyma.13g010100.1 locus=Glyma.13g010100 ID=Glyma.13g010100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDDPKGSSSWLKSLNISDIFGWKGHGEYGALAAIVISILVPVLFSALFFGKKKGKIRGVPVEVGGEECFAVRNARKTELVEVPWKGAPTMAHLFEQSCNKYTRNQFLGTRKIIQKEFVTSSDGRKFEKLHLGDYEWETYGEVFARVSNFASGLLKLGHNGDSRVAIFSDTRAEWLIALQGCFRQNVTVVTIYASLGEDALIHSLNETEVSTLICDSKQSKKLDAIRSRLTSLQNVIYFEDDNEEDAFSGSSSGWTIASFSEVEKLGKESPVEPSLPSKNAIAVIMYTSGSTGLPKGVMITHGNIVATTAAVMTVIPNLGSKDVYLAYLPLAHVFEMAAESVMLAAGCAIGYGSPLTLTDTSNKVKKGTKGDATVLKPTLLTAVPAILDRIRDGVVKKVEQKGGLVKNLFHFAYKRRLGAVKGSWLGAWGLEKLMWDTIVFKQIRTALGGQLRFMLCGGAPLSGDSQHFINICMGAPIGQGYGLTETFAGAAFSEWDDYSVGRVGPPLPCCHIKLVSWEEGGYLTSDKPMPRGEIVVGGFSVTAGYFKNQEKTKEVFKVDEKGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYISLGKIEAALSSCDHVDNIMVYADPFHNYCVALVVASHQSLEKWAQQAGIDYQDFPDLCNKPETVTEVLQSISKVAKSAKLEKTEIPAKIKLLPDPWTPESGLVTAALKIKREQLKAKFKDELQKLYA*

>Glyma.13g010100.2.p sequence-type=predicted peptide transcript=Glyma.13g010100.2 locus=Glyma.13g010100 ID=Glyma.13g010100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDDPKGSSSWLKSLNISDIFGWKGHGEYGALAAIVISILVPVLFSALFFGKKKGKIRGVPVEVGGEECFAVRNARKTELVEVPWKGAPTMAHLFEQSCNKYTRNQFLGTRKIIQKEFVTSSDGRKFEKLHLGDYEWETYGEVFARVSNFASGLLKLGHNGDSRVAIFSDTRAEWLIALQGCFRQNVTVVTIYASLGEDALIHSLNETEVSTLICDSKQSKKLDAIRSRLTSLQNVIYFEDDNEEDAFSGSSSGWTIASFSEVEKLGKESPVEPSLPSKNAIAVIMYTSGSTGLPKGVMITHGNIVATTAAVMTVIPNLGSKDVYLAYLPLAHVFEMAAESVMLAAGCAIGYGSPLTLTDTSNKVKKGTKGDATVLKPTLLTAVPAILDRIRDGVVKKVEQKGGLVKNLFHFAYKRRLGAVKGSWLGAWGLEKLMWDTIVFKQIRTALGGQLRFMLCGGAPLSGDSQHFINICMGAPIGQGYGLTETFAGAAFSEWDDYSVGRVGPPLPCCHIKLVSWEEGGYLTSDKPMPRGEIVVGGFSVTAGYFKNQEKTKEVFKVDEKGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYISLGKIEAALSSCDHVDNIMVYADPFHNYCVALVVASHQSLEKWAQQAGIDYQDFPDLCNKPETVTEVLQSISKVAKSAKLEKTEIPAKIKLLPDPWTPESGLVTAALKIKREQLKAKFKDELQKLYA*






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