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Report for Sequence Feature Glyma.13G304600

Feature Type:gene_model
Chromosome:Gm13
Start:40155003
stop:40157401
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.13G304600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G16730.1AT terpene synthase 02 JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0000287GO-mf magnesium ion binding EnsemblGenomesN/AIEA
GO:0000287GO-mf magnesium ion binding JGI N/AIEA
GO:0010333GO-mf terpene synthase activity EnsemblGenomesN/AIEA
GO:0010333GO-mf terpene synthase activity JGI N/AIEA
GO:0016829GO-mf lyase activity EnsemblGenomesN/AIEA
GO:0016829GO-mf lyase activity JGI N/AIEA
PF01397PFAM Terpene synthase, N-terminal domain JGI N/AIEA
PF03936PFAM Terpene synthase family, metal binding domain JGI N/AIEA
GN7V-61706SoyCyc9-rxn isoprene synthase Plant Metabolic Network ISS

Expression Patterns of Glyma.13G304600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.13G304600 not represented in the dataset
Glyma.13G304600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.



Coding sequences of Glyma.13G304600
>Glyma.13g304600.1 sequence-type=CDS polypeptide=Glyma.13g304600.1.p locus=Glyma.13g304600 ID=Glyma.13g304600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCGAATTTCTCAATGGATCATCAAGAAAACTCGTGTGCTACAAGAAAACAAGATACTCAATTTACAAAAATTGAAAATAGATGTTCAGCATATTACCGGCCCAATCGTTGGACTCATGAATTTGTCCAGTCCCTGGGAAATCATCTTGTGGAAAGGGCCAAGAAAACCACAATTGCCATAAACATATGGAACGTGCCTGAGAGTTTCAGAGATGAAGAGGGAAATTTCAAAGTTAAAATTAGCAATAGCAACGATGTGCAAGGAATGTTAAGTCTTTATGAGGCATCACACCTGACATTCGAAGGAGAAAGTCTTTGGGAGGCAAAGCCATTTTCAAGAACATATCTCATGAACTTATTGAAACAAGGGATAGAGACTGAAGTTGCAAAAGAAGTTAGAGCTTGCAAAGCTAGATTTCAACATGGTTCAGTCACACGTAAAAAAGAACTACAAGAAGTGTCAAGGTGGTGGAAGGACATTGGCCTTGCAAGTAAACTGAACTTTGCTAGTGACAGATTAGTGGAATCCGTCTTGTGGATGCTAGGAATGTTTCCTGAACCTCAATTCGCTAATTGCCGCAAAGAACTCACAAATGTGGGGAAGCTAATCACAATCATAAATGATGTATACGATGTCTATGGTACTTTGGATGATTACAGCTCTTCACAGATGCTGTTGAGAGACTACATGATACTATGCTTCCCAGCCTTCTTTAACACTGTTAATGTGATGACTTATGACATCTTTAAAGAACGGGACATCAAATGTCTTCCTCACCTCACAACTAATTATTCCTTTCATGATGAGATAGAGAGGGGTGAAACCTCAAATTCAATCGTTAGCTACTTGCATGAAACTAGTCTTTCAGAAGAACATACCCATCAATACTATAGAGCTTTGATTGACAGAATGGCAGAACTTGAATAA
Predicted protein sequences of Glyma.13G304600
>Glyma.13g304600.1.p sequence-type=predicted peptide transcript=Glyma.13g304600.1 locus=Glyma.13g304600 ID=Glyma.13g304600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPNFSMDHQENSCATRKQDTQFTKIENRCSAYYRPNRWTHEFVQSLGNHLVERAKKTTIAINIWNVPESFRDEEGNFKVKISNSNDVQGMLSLYEASHLTFEGESLWEAKPFSRTYLMNLLKQGIETEVAKEVRACKARFQHGSVTRKKELQEVSRWWKDIGLASKLNFASDRLVESVLWMLGMFPEPQFANCRKELTNVGKLITIINDVYDVYGTLDDYSSSQMLLRDYMILCFPAFFNTVNVMTYDIFKERDIKCLPHLTTNYSFHDEIERGETSNSIVSYLHETSLSEEHTHQYYRALIDRMAELE*






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