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Report for Sequence Feature Glyma.13G038700

Feature Type:gene_model
Chromosome:Gm13
Start:12002911
stop:12008557
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.13G038700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G43800.1AT Plant stearoyl-acyl-carrier-protein desaturase family protein JGI N/AIEA
GO:0006631GO-bp fatty acid metabolic process EnsemblGenomesN/AIEA
GO:0006631GO-bp fatty acid metabolic process JGI N/AIEA
GO:0006633GO-bp fatty acid biosynthetic process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0009507GO-cc chloroplast EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
GO:0045300GO-mf acyl-[acyl-carrier-protein] desaturase activity EnsemblGenomesN/AIEA
GO:0045300GO-mf acyl-[acyl-carrier-protein] desaturase activity JGI N/AIEA
GO:0046872GO-mf metal ion binding EnsemblGenomesN/AIEA
PF03405PFAM Fatty acid desaturase JGI N/AIEA
PWY-5147SoyCyc9 oleate biosynthesis I (plants) Plant Metabolic Network ISS
PWY-5156SoyCyc9 superpathway of fatty acid biosynthesis II (plant) Plant Metabolic Network ISS
PWY-5366SoyCyc9 palmitoleate biosynthesis II (plants and bacteria) Plant Metabolic Network ISS
GN7V-59248SoyCyc9-rxn stearoyl-[acyl-carrier-protein] 9-desaturase Plant Metabolic Network ISS

Gene model name correspondences to Glyma.13G038700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g08963 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.13G038700
>Glyma.13g038700.1 sequence-type=primary primary transcript locus=Glyma.13g038700 ID=Glyma.13g038700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGCCGGAAAAGATAGAGATTTTCAAGTCACTAGAGGGATGGGCCTCGCAGCAGGTCCTGCCACTGCTGAAGCCCGTGGAGCAAATAAGAAATTTCTTTATTGGTATTTTTTATTTGATAGAGAATAGGCCGTTGGCAATTGATTCTAAACAGGCTATTAATCATATTAAGAGGAAGTATGAGTTGGAGAATATGGAAATTGTGAACAAGGAAAAAGAAAAGGTTCGATATGATTTCCTGGTATTTGTAGAATGTAATTTCCATCAACATGACTTCGTCCCCAACTCCTCATTGCCGTTCAAAGAGTTCACCGATGAGGTTAGGGCTCTTCGCGAGCGCACGATGGAGCTACCGGACGAGTACTTTGTGGTGCTGGTGGGAGACATGATTACGGAGGAAGCGCTTCCTACTTACCAGACCACGATGAACAACCTCGATGGGGTGAGAGATGAGTACGGAGCATGCCAAAGCCCGTGGGCCGTGTGGACCCGGGCCTGGTCCGTGGAAGAAAACAGGCACGGGGATTTGCTCAAAACCTATATGTATCTTTCTGGCCGTGTTGATATGGAGAGGGTCGAGAAGACTATTCATTACCTCATTGCTTCAGGCTGGGATGTTGGTATGGAGAACAACCCATATTTGGGGTTTGTGTACACGTCATTCCAAGAGCGAGCAACATTCGTGGCACATGGGAACACAGCTCGGCTTGCGAAGGAGGGTGGTGATCCAGTGCTAGCGCGCATATGCGACACGAGAACGCAAGTGGACCCCACCGGGGCAATGTTGGCCATAGGAAAAATGATGCAGAAAAAGATCATAATGCCGGCGCACCTTATGTACGATGGGGATGACCCCAGGCTATTTGAACACTACTCCGCGGTGGCGCAACGTATAGGCGTGTACACGGCCAATGACTATGCAAACATCTTGGACTTTCTGGTTGGACGGTGGAGATTGGAGAAGCTGGAAAGTTTGACGGCTGAGGGAAAGAGGGCACAGGATTACGTGTGTGAGTTACCACCGAGGATTAGGAAGTTGCAAGAGCGAGCTGATGAGCGAGCGCGTAAGATGAAGCCTAATAGCTTCAAGTTCAATTGGATATTTAACAAAGAGTTGCTTTTGTGA
Coding sequences of Glyma.13G038700
>Glyma.13g038700.1 sequence-type=CDS polypeptide=Glyma.13g038700.1.p locus=Glyma.13g038700 ID=Glyma.13g038700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGCCGGAAAAGATAGAGATTTTCAAGTCACTAGAGGGATGGGCCTCGCAGCAGGTCCTGCCACTGCTGAAGCCCGTGGAGCAAATAAGAAATTTCTTTATTGGTATTTTTTATTTGATAGAGAATAGGCCGTTGGCAATTGATTCTAAACAGGCTATTAATCATATTAAGAGGAAGTATGAGTTGGAGAATATGGAAATTGTGAACAAGGAAAAAGAAAAGGTTCGATATGATTTCCTGGTATTTGTAGAATGTAATTTCCATCAACATGACTTCGTCCCCAACTCCTCATTGCCGTTCAAAGAGTTCACCGATGAGGTTAGGGCTCTTCGCGAGCGCACGATGGAGCTACCGGACGAGTACTTTGTGGTGCTGGTGGGAGACATGATTACGGAGGAAGCGCTTCCTACTTACCAGACCACGATGAACAACCTCGATGGGGTGAGAGATGAGTACGGAGCATGCCAAAGCCCGTGGGCCGTGTGGACCCGGGCCTGGTCCGTGGAAGAAAACAGGCACGGGGATTTGCTCAAAACCTATATGTATCTTTCTGGCCGTGTTGATATGGAGAGGGTCGAGAAGACTATTCATTACCTCATTGCTTCAGGCTGGGATGTTGGTATGGAGAACAACCCATATTTGGGGTTTGTGTACACGTCATTCCAAGAGCGAGCAACATTCGTGGCACATGGGAACACAGCTCGGCTTGCGAAGGAGGGTGGTGATCCAGTGCTAGCGCGCATATGCGACACGAGAACGCAAGTGGACCCCACCGGGGCAATGTTGGCCATAGGAAAAATGATGCAGAAAAAGATCATAATGCCGGCGCACCTTATGTACGATGGGGATGACCCCAGGCTATTTGAACACTACTCCGCGGTGGCGCAACGTATAGGCGTGTACACGGCCAATGACTATGCAAACATCTTGGACTTTCTGGTTGGACGGTGGAGATTGGAGAAGCTGGAAAGTTTGACGGCTGAGGGAAAGAGGGCACAGGATTACGTGTGTGAGTTACCACCGAGGATTAGGAAGTTGCAAGAGCGAGCTGATGAGCGAGCGCGTAAGATGAAGCCTAATAGCTTCAAGTTCAATTGGATATTTAACAAAGAGTTGCTTTTGTGA
Predicted protein sequences of Glyma.13G038700
>Glyma.13g038700.1.p sequence-type=predicted peptide transcript=Glyma.13g038700.1 locus=Glyma.13g038700 ID=Glyma.13g038700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAPEKIEIFKSLEGWASQQVLPLLKPVEQIRNFFIGIFYLIENRPLAIDSKQAINHIKRKYELENMEIVNKEKEKVRYDFLVFVECNFHQHDFVPNSSLPFKEFTDEVRALRERTMELPDEYFVVLVGDMITEEALPTYQTTMNNLDGVRDEYGACQSPWAVWTRAWSVEENRHGDLLKTYMYLSGRVDMERVEKTIHYLIASGWDVGMENNPYLGFVYTSFQERATFVAHGNTARLAKEGGDPVLARICDTRTQVDPTGAMLAIGKMMQKKIIMPAHLMYDGDDPRLFEHYSAVAQRIGVYTANDYANILDFLVGRWRLEKLESLTAEGKRAQDYVCELPPRIRKLQERADERARKMKPNSFKFNWIFNKELLL*






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