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Report for Sequence Feature Glyma.12g226500

Feature Type:gene_model
Chromosome:Gm12
Start:40065325
stop:40068604
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g226500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G53950.1AT ANAC098,ATCUC2,CUC2 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
PTHR31744PantherFam PROTEIN CUP-SHAPED COTYLEDON 2-RELATED JGI N/AIEA
PTHR31744:SF22PantherFam NAC DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF02365Pfam No apical meristem (NAM) protein JGI N/AIEA

Proteins Associated with Glyma.12g226500
LocusGene SymbolProtein Name
NLP4 protein CUP-SHAPED COTYLEDON 2-like
NAC093 NAC Transcription Factor gene 93

Gene model name correspondences to Glyma.12g226500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g35530 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g226500
>Glyma.12g226500.1 sequence-type=CDS polypeptide=Glyma.12g226500.1.p locus=Glyma.12g226500 id=Glyma.12g226500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACCACACCGAAGCTCACTTGCCACCTGGTTTTCGGTTCCACCCAACTGATGAGGAGCTCATAACTTACTACCTTCTCAAGAAGGTTCTTGACAGCACCTTCACTGGTAGAGCCATAGCTGAAGTTGATCTCAACAAGAGTGAGCCATGGGAGCTCCCTGAGAAAGCTAAGATGGGAGAGAAAGAGTGGTACTTCTTCAGCTTACGTGACAGAAAGTACCCAACTGGGTTAAGAACCAATAGGGCTACTGAAGCTGGGTACTGGAAAGCCACAGGGAAAGATAGAGAGATTTACAGCTCCAAAACTTGTTCTTTGGTGGGGATGAAGAAAACCTTGGTTTTCTACCGTGGTAGAGCTCCAAAGGGAGAGAAAAGCAACTGGGTCATGCATGAGTATCGCCTTGAAGGCAAATTTGCTTACCACTACCTTTCTCGCAACTCCGAGGATGAGTGGGTCATATCACGTGTGTTTCGGAAGAGTAACACCACACCGATCACCAATGGAGGCTCCACCATGTCCGCTTCTACTAACTCCAAGAAGACAAGAATTAACAACACCACCTCTCTTATCCATGAACCAGGTTCACCCTCTTCAGTTTTCCTTCCACCTCTTCTAGACTCTTCTCCCTACACCAACACCACCACCAACACCTTCACCGACCATCACAATAGTTCTTATGATAGTGCCACCAAAAAGGAGCACGTGTCCTGTTTCTCCACAATAGCTGCAGCAACAGCTGTTGTCTCCCCCAACAACAACTTCAACAATGCAAGCTTCGACCTTCCACCTTCTCAGCCTCTTGCAACCGACCCTTTTGCAAGGTTTCAGAGAAACGTTGGTCTTTCTGCTTTTCCAAGTTTGAGGTCTCTACAAGACAACCTTCAGCTACCTTTCTTCTTCTCCACGGCGGCGGCGCCTCCCTTCTCCGGCGGAGGCTCCGGCGACTTCCTCAGCTGGCCAGTGCCGGAGGATGGTGTTTCCAACATGCCACTGGGCGTGTCGGAGCTTGATTGCATGTGGGGCTACTAA

>Glyma.12g226500.2 sequence-type=CDS polypeptide=Glyma.12g226500.2.p locus=Glyma.12g226500 id=Glyma.12g226500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTTGGTGCTTCTGATTATAGTGTGCTGACAGAGAAGATATGCAACAGCTTTATCGATACATATAACATGTGTTCCTTTCCTCTTTTTCTCTCCAACGGACAACTCTTCTTACCACACATGGACCACACCGAAGCTCACTTGCCACCTGGTTTTCGGTTCCACCCAACTGATGAGGAGCTCATAACTTACTACCTTCTCAAGAAGGTTCTTGACAGCACCTTCACTGGTAGAGCCATAGCTGAAGTTGATCTCAACAAGAGTGAGCCATGGGAGCTCCCTGAGAAAGCTAAGATGGGAGAGAAAGAGTGGTACTTCTTCAGCTTACGTGACAGAAAGTACCCAACTGGGTTAAGAACCAATAGGGCTACTGAAGCTGGGTACTGGAAAGCCACAGGGAAAGATAGAGAGATTTACAGCTCCAAAACTTGTTCTTTGGTGGGGATGAAGAAAACCTTGGTTTTCTACCGTGGTAGAGCTCCAAAGGGAGAGAAAAGCAACTGGGTCATGCATGAGTATCGCCTTGAAGGCAAATTTGCTTACCACTACCTTTCTCGCAACTCCGAGGATGAGTGGGTCATATCACGTGTGTTTCGGAAGAGTAACACCACACCGATCACCAATGGAGGCTCCACCATGTCCGCTTCTACTAACTCCAAGAAGACAAGAATTAACAACACCACCTCTCTTATCCATGAACCAGGTTCACCCTCTTCAGTTTTCCTTCCACCTCTTCTAGACTCTTCTCCCTACACCAACACCACCACCAACACCTTCACCGACCATCACAATAGTTCTTATGATAGTGCCACCAAAAAGGAGCACGTGTCCTGTTTCTCCACAATAGCTGCAGCAACAGCTGTTGTCTCCCCCAACAACAACTTCAACAATGCAAGCTTCGACCTTCCACCTTCTCAGCCTCTTGCAACCGACCCTTTTGCAAGGTTTCAGAGAAACGTTGGTCTTTCTGCTTTTCCAAGTTTGAGGTCTCTACAAGACAACCTTCAGCTACCTTTCTTCTTCTCCACGGCGGCGGCGCCTCCCTTCTCCGGCGGAGGCTCCGGCGACTTCCTCAGCTGGCCAGTGCCGGAGGATGGTGTTTCCAACATGCCACTGGGCGTGTCGGAGCTTGATTGCATGTGGGGCTACTAA
Predicted protein sequences of Glyma.12g226500
>Glyma.12g226500.1.p sequence-type=predicted peptide transcript=Glyma.12g226500.1 locus=Glyma.12g226500 id=Glyma.12g226500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDHTEAHLPPGFRFHPTDEELITYYLLKKVLDSTFTGRAIAEVDLNKSEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRNSEDEWVISRVFRKSNTTPITNGGSTMSASTNSKKTRINNTTSLIHEPGSPSSVFLPPLLDSSPYTNTTTNTFTDHHNSSYDSATKKEHVSCFSTIAAATAVVSPNNNFNNASFDLPPSQPLATDPFARFQRNVGLSAFPSLRSLQDNLQLPFFFSTAAAPPFSGGGSGDFLSWPVPEDGVSNMPLGVSELDCMWGY*

>Glyma.12g226500.2.p sequence-type=predicted peptide transcript=Glyma.12g226500.2 locus=Glyma.12g226500 id=Glyma.12g226500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVGASDYSVLTEKICNSFIDTYNMCSFPLFLSNGQLFLPHMDHTEAHLPPGFRFHPTDEELITYYLLKKVLDSTFTGRAIAEVDLNKSEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRNSEDEWVISRVFRKSNTTPITNGGSTMSASTNSKKTRINNTTSLIHEPGSPSSVFLPPLLDSSPYTNTTTNTFTDHHNSSYDSATKKEHVSCFSTIAAATAVVSPNNNFNNASFDLPPSQPLATDPFARFQRNVGLSAFPSLRSLQDNLQLPFFFSTAAAPPFSGGGSGDFLSWPVPEDGVSNMPLGVSELDCMWGY*






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