SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.12g187600

Feature Type:gene_model
Chromosome:Gm12
Start:36319869
stop:36321020
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g187600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G44220.1AT JGI N/AIEA
PTHR31415PantherFam OS05G0367900 PROTEIN JGI N/AIEA
PF03168Pfam Late embryogenesis abundant protein JGI N/AIEA

Proteins Associated with Glyma.12g187600
LocusGene SymbolProtein Name
LEA2-65 late embryogenesis abundant 2 gene 65

Gene model name correspondences to Glyma.12g187600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g31320 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g187600
>Glyma.12g187600.1 sequence-type=CDS polypeptide=Glyma.12g187600.1.p locus=Glyma.12g187600 id=Glyma.12g187600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGCACCAAGGAGTGCTGCCACCACGACGAGGAGCGGCGTCAGCTCCCCCGCCGCGTATTCGCCGCGATCCTCGGCTTCATCCTCCTCATCCTCCTGGTGATCTTCCTCATCTGGATCATCCTCCGCCCCACCAAACCCCGCTTCATCCTCCAAGACGCCACCGTCTACGCCTTCAACCTCTCCTCCACCGGCGACACCCCTTCCCCCATTACCCCAACCCCCAACACCCTCACCCTCACCATGCAGGTCACCCTCGCCGCCTTCAACCCCAACCACCGCATCGGAGTTTACTACACCAAACTCGACGCCTACGCCGCCTACCGCGGCCAGCAGGTCTCCGTCGCCACCTCCCTCCCCGCCACCTACCAGGGCCACCGCGACACCTCCGTCTGGTCCCCCTACCTCTACGCCACCGCCGTCCCCGTCTCCCCCTTCACGCTCCAGATCCTCCAGCAGGACAAAACCTCCGGAGGAATTCTGGTCAACGTAAAAGTCAACGGAAGAGTCAAGTGGAAGGTCGGAACTTGGGTTTCCGGAATTTACCATATTAATGTCAACTGTCCGGCGTACCTCAGGCTCGCCGGCGACCGGGACGACGCCATCGGATTTGCCGGTCCGGCCGTGAAGTTTCAGCTCTTCCAAACATGCATTGTTGATGTCTAG
Predicted protein sequences of Glyma.12g187600
>Glyma.12g187600.1.p sequence-type=predicted peptide transcript=Glyma.12g187600.1 locus=Glyma.12g187600 id=Glyma.12g187600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSTKECCHHDEERRQLPRRVFAAILGFILLILLVIFLIWIILRPTKPRFILQDATVYAFNLSSTGDTPSPITPTPNTLTLTMQVTLAAFNPNHRIGVYYTKLDAYAAYRGQQVSVATSLPATYQGHRDTSVWSPYLYATAVPVSPFTLQILQQDKTSGGILVNVKVNGRVKWKVGTWVSGIYHINVNCPAYLRLAGDRDDAIGFAGPAVKFQLFQTCIVDV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo