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Report for Sequence Feature Glyma.12g183700

Feature Type:gene_model
Chromosome:Gm12
Start:35937451
stop:35944435
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g183700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G27600.1AT ATSKD1,SKD1,VPS4 JGI N/AIEA
3.6.4.6EC vesicle-fusing ATPase JGI N/AIEA
GO:0006281GO-bp DNA repair JGI N/AIEA
GO:0006310GO-bp DNA recombination JGI N/AIEA
GO:0009378GO-mf four-way junction helicase activity JGI N/AIEA
K12196KEGG DNA repair and recombination proteins JGI N/AIEA
PTHR23074PantherFam AAA DOMAIN-CONTAINING JGI N/AIEA
PF04212Pfam MIT (microtubule interacting and transport) domain JGI N/AIEA
PF05496Pfam Holliday junction DNA helicase RuvB P-loop domain JGI N/AIEA
PF09336Pfam Vps4 C terminal oligomerisation domain JGI N/AIEA

Gene model name correspondences to Glyma.12g183700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g30910 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g183700
>Glyma.12g183700.1 sequence-type=CDS polypeptide=Glyma.12g183700.1.p locus=Glyma.12g183700 id=Glyma.12g183700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTATAGCAATTTCAAGGAGCAAGCCATAGAGTACGTGAAGCAGGCCGTGCAGGAAGACAATGCGGGAAACTACGCGAAAGCGTTCCCTCTCTACATGAACGCCTTGGAGTACTTCAAGACGCATCTCAAGTACGAGAAGAACCCTAAGATCAAGGAAGCCATCACGCAGAAATTCACCGAGTACCTGCGCCGGGCCGAGGAGATTCGGGCCGTGCTCGACGATGGCGGCCCCGGCCCAGCCTCCAACGGGGACGCGGCGGTGGCTGCAAGGCCCAAGACCAAGCCGAAGGACGGGGAAAGCGGTGGCGGTGGTGACGGCGAGGACCCCGAGCAGGCCAAGCTCCGGGCCGGGCTCAACTCGGCCATCATAAGGGAAAAGCCCAACGTGAAGTGGAACGACGTCGCAGGGTTGGAGAGCGCCAAACAGGCCTTGCAGGAGGCTGTGATTTTGCCTGTGAAGTTCCCTCAGTTCTTTACTGGGAAAAGACGACCCTGGAGAGCTTTCTTGTTGTATGGACCTCCTGGAACGGGAAAATCATATTTAGCCAAGGCAGTTGCAACAGAAGCTGAGTCCACGTTTTTCAGTGTTTCTTCATCAGACCTTGTTTCAAAGTGGATGGGTGAAAGTGAAAAGCTGGTTTCAAACCTTTTCGAAATGGCTCGAGAAAGTGCCCCTTCTATCATATTTATTGACGAAATTGATTCCCTGTGTGGTCAGCGTGGAGAAGGCAATGAGAGTGAAGCTTCAAGACGGATTAAAACAGAGCTTCTGGTGCAGATGCAGGGTGTAGGACACAATGATCAGAAAGTTCTTGTTCTTGCAGCAACAAATACGCCCTATGCTTTAGACCAGGCAATAAGGCGTCGTTTTGATAAGCGCATATATATTCCACTACCAGATTTGAAGGCTCGCCAACACATGTTCAAGGTGCATCTAGGAGATACTCCCCATAACTTGACTGAAAGCGATTTTGAATACTTGGCTAGCAGGACAGAGGGGTTTTCTGGTTCAGACATATCTGTCTGTGTAAAGGATGTGTTATTTGAACCTGTTCGCAAAACCCAAGATGCAATGTTCTTCTTGAAGAATCCCGAGGGTATGTGGATCCCGTGTGGACCAAAGCAACAGGGTGCAGTACAAACCTCAATGCAAGAGCTTGCTGCAAAAGGACTTGCTTCTAAGATCCTTCCGCCCCCTATTACGAGGACAGATTTTGAGAAGGTACTCGCTAGACAAAGGCCTACAGTAAGCAAAGCCGACCTTGATGTTCACGAGAGATTCACAAAGGAATTTGGAGAGGAAGGTTAA

>Glyma.12g183700.2 sequence-type=CDS polypeptide=Glyma.12g183700.2.p locus=Glyma.12g183700 id=Glyma.12g183700.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTATAGCAATTTCAAGGAGCAAGCCATAGAGTACGTGAAGCAGGCCGTGCAGGAAGACAATGCGGGAAACTACGCGAAAGCGTTCCCTCTCTACATGAACGCCTTGGAGTACTTCAAGACGCATCTCAAGTACGAGAAGAACCCTAAGATCAAGGAAGCCATCACGCAGAAATTCACCGAGTACCTGCGCCGGGCCGAGGAGATTCGGGCCGTGCTCGACGATGGCGGCCCCGGCCCAGCCTCCAACGGGGACGCGGCGGTGGCTGCAAGGCCCAAGACCAAGCCGAAGGACGGGGAAAGCGGTGGCGGTGGTGACGGCGAGGACCCCGAGCAGGCCAAGCTCCGGGCCGGGCTCAACTCGGCCATCATAAGGGAAAAGCCCAACGTGAAGTGGAACGACGTCGCAGGGTTGGAGAGCGCCAAACAGGCCTTGCAGGAGGCTGTGATTTTGCCTGTGAAGTTCCCTCAGTTCTTTACTGGGAAAAGACGACCCTGGAGAGCTTTCTTGTTGTATGGACCTCCTGGAACGGGAAAATCATATTTAGCCAAGGCAGTTGCAACAGAAGCTGAGTCCACGTTTTTCAGTGTTTCTTCATCAGACCTTGTTTCAAAGTGGATGGGTGAAAGTGAAAAGCTGGTTTCAAACCTTTTCGAAATGGCTCGAGAAAGTGCCCCTTCTATCATATTTATTGACGAAATTGATTCCCTGTGTGGTCAGCGTGGAGAAGGCAATGAGAGTGAAGCTTCAAGACGGATTAAAACAGAGCTTCTGGTGCAGATGCAGGGTGTAGGACACAATGATCAGAAAGTTCTTGTTCTTGCAGCAACAAATACGCCCTATGCTTTAGACCAGGCAATAAGGCGTCGTTTTGATAAGCGCATATATATTCCACTACCAGATTTGAAGGCTCGCCAACACATGTTCAAGGCAAGGACAATATACTTGATTGTTGAATGA
Predicted protein sequences of Glyma.12g183700
>Glyma.12g183700.1.p sequence-type=predicted peptide transcript=Glyma.12g183700.1 locus=Glyma.12g183700 id=Glyma.12g183700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MYSNFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDDGGPGPASNGDAAVAARPKTKPKDGESGGGGDGEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEAESTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFEYLASRTEGFSGSDISVCVKDVLFEPVRKTQDAMFFLKNPEGMWIPCGPKQQGAVQTSMQELAAKGLASKILPPPITRTDFEKVLARQRPTVSKADLDVHERFTKEFGEEG*

>Glyma.12g183700.2.p sequence-type=predicted peptide transcript=Glyma.12g183700.2 locus=Glyma.12g183700 id=Glyma.12g183700.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MYSNFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDDGGPGPASNGDAAVAARPKTKPKDGESGGGGDGEDPEQAKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEAESTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKARTIYLIVE*






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