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Report for Sequence Feature Glyma.12g130800

Feature Type:gene_model
Chromosome:Gm12
Start:14757063
stop:14757409
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.12g130800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G24940.1AT membrane-associated progesterone binding protein 2 JGI N/AIEA
GO:0012505GO-cc endomembrane system EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0020037GO-mf heme binding EnsemblGenomesN/AIEA
GO:0020037GO-mf heme binding JGI N/AIEA
PTHR10281Panther MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED JGI N/AIEA
PTHR10281:SF26Panther NEUDESIN JGI N/AIEA
PF00173PFAM Cytochrome b5-like Heme/Steroid binding domain JGI N/AIEA

Expression Patterns of Glyma.12g130800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.12g130800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g15710 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g130800
>Glyma.12g130800.1 sequence-type=CDS polypeptide=Glyma.12g130800.1.p locus=Glyma.12g130800 ID=Glyma.12g130800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTGTTGCAGTATCACCGTGCCGTAGGCTACCCCGTTGTGGTTGTCAGCTGTGTCGTGAGAGGAGTGGGTCGCGTCAACGACGCCAGCACTGGAAAATCCTTTTACGGCCCCGGCGGCCCCTATGCCATGTTCGCCGGCAAAGACACCAGCAGAGCCCTGGCGAAGATGAGCAAGAACGACGACGACATCCCCCCCTCCCTCGACGACCTCTCTGATAAGGCGATAGACGTTCTCAATGACTGGGAGAACAAATTCCAAGCTAAGTACCTGGTGGTTGCTCGTGTTCTCAATTAA
Predicted protein sequences of Glyma.12g130800
>Glyma.12g130800.1.p sequence-type=predicted peptide transcript=Glyma.12g130800.1 locus=Glyma.12g130800 ID=Glyma.12g130800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLLQYHRAVGYPVVVVSCVVRGVGRVNDASTGKSFYGPGGPYAMFAGKDTSRALAKMSKNDDDIPPSLDDLSDKAIDVLNDWENKFQAKYLVVARVLN*






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