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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G53390.1 | AT | O-acyltransferase (WSD1-like) family protein | JGI | N/A | IEA |
GO:0019432 | GO-bp | triglyceride biosynthetic process | EnsemblGenomes | N/A | IEA |
GO:0045017 | GO-bp | glycerolipid biosynthetic process | EnsemblGenomes | N/A | IEA |
GO:0045017 | GO-bp | glycerolipid biosynthetic process | JGI | N/A | IEA |
GO:0005886 | GO-cc | plasma membrane | EnsemblGenomes | N/A | IEA |
GO:0004144 | GO-mf | diacylglycerol O-acyltransferase activity | EnsemblGenomes | N/A | IEA |
GO:0004144 | GO-mf | diacylglycerol O-acyltransferase activity | JGI | N/A | IEA |
GO:0047196 | GO-mf | long-chain-alcohol O-fatty-acyltransferase activity | EnsemblGenomes | N/A | IEA |
PF03007 | PFAM | Wax ester synthase-like Acyl-CoA acyltransferase domain | JGI | N/A | IEA |
PF06974 | PFAM | Protein of unknown function (DUF1298) | JGI | N/A | IEA |
PWY-5884 | SoyCyc9 | wax esters biosynthesis I | Plant Metabolic Network | ISS | |
TRIGLSYN-PWY | SoyCyc9 | diacylglycerol and triacylglycerol biosynthesis | Plant Metabolic Network | ISS | |
GN7V-54626 | SoyCyc9-rxn | long-chain-alcohol O-fatty-acyltransferase | Plant Metabolic Network | ISS |
Glyma.12g114900 not represented in the dataset |
Glyma.12g114900 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.06g291200 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma12g13020 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.12g114900.2 sequence-type=transcript locus=Glyma.12g114900 ID=Glyma.12g114900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 GTATAAAGAACATGGTTTATCCTTCATTTTGTAAAAAAAAAATGATTTGCCCTTCATACACAACAATACAATTATCTAAAGCTATATATAAGTGATCATAGACAGACACATGTTCAATCTCCAAGTAGTACATAATTTAGTCTCTAATTTCTAAAACTCGTCAGTGCAATAGTATAATGGACAACTTCGAAGATGCTACAGAGCCAGTGAGTCCTAGTGGACGATTCTTCAACACCACGGTGCTATGTGCGTATGTTTTTGGCTTCTTAGAATCAGAAGTTCCAATTGAATTCTCTCAAGCCAAGTATTTGTTCGAAGATGTCTTTCTACCCGTCAATCCACACTTTTCTTCCATAATGGTGAGAGATGAAGAAGGAGAAATGAAATGGAAAAGGGTAGAGGTGAAGTTCGAAGATCACGTAAAGATTCCAACGTTCCCCGAAAACGAGTCACTAGAATTGTATGACCAATATTTTGATGACTATGTGACAAAGATATTAATGGAAAGGACACCACAAGATAAACCACTTTGGGAAATTCATGTGATCAAATACCCTACAAGCAATGCTGCTGGCACCTTAATATTCAAACTTCACCATGCACTTGGAGATGGTTACTCCCTAGTGGGTGCTCTTCTCTCTTGTCTTCAGAGAGCTGATGACCCTTCTCTTCCTCTTTCGTTTCCCTCCCGAAAATCCTCGGCATCTTCATCTCCTTCCAAGAAGGGCTTCTTCAGGTTGTTCTCTTCAACTTTGTTCTCCTTTTTTAACTCTATTTCGGATTTTGGATGGAGCATAGTGAAAAGCTCAATTGTTGAAGATGATGAGACACCCATAAGGAGTGGTGAGGAAGGTGTTGAGTCTCTGCCTTGTGTGATATCAAACATATCCTTTGATCTTGATCAAGTGAAGAAAATCAAGTCCAAGCTAGGAGTGACAGTAAACGATGTAATTACTGGGGCAATTTTCTATGGGATTAGGCTGTACATGCAAGAGATTGACAATAAGGCAGGCAAAGCAAATTCCACAGGATTGGTGATGCTTAGTACTAGAAACATTGGAAGTTACCAATCAATCCAAGAAATGATGAAGGCTGATTCCAAATCTCCTTGGGGGAATCATATTTCTTTCTTGCACGTACCCATACCTAAGCTAAGCCAAGCCAGCCTATCCAACCCCCTTGAATTTGTTTGGAAAGCCCAAAAAATAATCAAGAGGAAGAGAAAGTCTTTCACTGTTTTTCTCATTGAATGGCTTTTAGATATGGAGCTGAAATTAAGAGGACACGAGGCCGTGGCTAAACATATCTATGGGACACTAAGAAACTCAAGTGTTGTCGTATCCAACTTGATTGGACCAATAGAACCTATGGCTTTGGCAAATCATCCTGTGAAAGGCTTGTATTTCACAATGACTGGTGGACCCGAGAGAGGAGAGATTCGTGAACAAGGTCAAGATCACAAACCATCCTCGTCTTCGAGTTCGTTCCCGGTGCCAGCTTCACCGTCAGCCTCAACAACCATCGTCTTTGGTGCCGTGATCTGACAGTTATGAACATCTTTGTTGTGGGGTTCTCAATATCTGGTTTTTCCCTTGATGGCTTTGGGTTGATTTGGGGTTTTGATTATTCTTTGTATTGAAAATTAAGAGTCTTTTGTTGTTTGATAACTCGGGGCTTGAAAATGTGGGTTTTGGATGGCAAGGTTCAGTAGTATAAAGATCCTATGGGACGAATCATAGATCTGGTGGTCTTACGGGCGTGGTCGTAGAAGATGAACCAGGAACCATGAATCTTTTTTTGGTTTATTTTTTTTAAAATGTATTTCAAAATGTATTTTAAAATATATTAAGGATG >Glyma.12g114900.3 sequence-type=transcript locus=Glyma.12g114900 ID=Glyma.12g114900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 GTATAAAGAACATGGTTTATCCTTCATTTTGTAAAAAAAAAATGATTTGCCCTTCATACACAACAATACAATTATCTAAAGCTATATATAAGTGATCATAGACAGACACATGTTCAATCTCCAAGTAGTACATAATTTAGTCTCTAATTTCTAAAACTCGTCAGTGCAATAGTATAATGGACAACTTCGAAGATGCTACAGAGCCAGTGAGTCCTAGTGGACGATTCTTCAACACCACGGTGCTATGTGCGTATGTTTTTGGCTTCTTAGAATCAGAAGTTCCAATTGAATTCTCTCAAGCCAAGTATTTGTTCGAAGATGTCTTTCTACCCGTCAATCCACACTTTTCTTCCATAATGGTGAGAGATGAAGAAGGAGAAATGAAATGGAAAAGGGTAGAGGTGAAGTTCGAAGATCACGTAAAGATTCCAACGTTCCCCGAAAACGAGTCACTAGAATTGTATGACCAATATTTTGATGACTATGTGACAAAGATATTAATGGAAAGGACACCACAAGATAAACCACTTTGGGAAATTCATGTGATCAAATACCCTACAAGCAATGCTGCTGGCACCTTAATATTCAAACTTCACCATGCACTTGGAGATGGTTACTCCCTAGTGGGTGCTCTTCTCTCTTGTCTTCAGAGAGCTGATGACCCTTCTCTTCCTCTTTCGTTTCCCTCCCGAAAATCCTCGGCATCTTCATCTCCTTCCAAGAAGGGCTTCTTCAGGTTGTTCTCTTCAACTTTGTTCTCCTTTTTTAACTCTATTTCGGATTTTGGATGGAGCATAGTGAAAAGCTCAATTGTTGAAGATGATGAGACACCCATAAGGAGTGGTGAGGAAGGTGTTGAGTCTCTGCCTTGTGTGATATCAAACATATCCTTTGATCTTGATCAAGTGAAGAAAATCAAGTCCAAGCTAGGAGTGACAGTAAACGATGTAATTACTGGGGCAATTTTCTATGGGATTAGGCTGTACATGCAAGAGATTGACAATAAGGCAGGCAAAGCAAATTCCACAGGATTGGTGATGCTTAGTACTAGAAACATTGGAAGTTACCAATCAATCCAAGAAATGATGAAGGCTGATTCCAAATCTCCTTGGGGGAATCATATTTCTTTCTTGCACGTACCCATACCTAAGCTAAGCCAAGCCAGCCTATCCAACCCCCTTGAATTTGTTTGGAAAGCCCAAAAAATAATCAAGAGGAAGAGAAAGTCTTTCACTGTTTTTCTCATTGAATGGCTTTTAGATATGGAGCTGAAATTAAGAGGACACGAGGTGGGAGCATACATGTGCCGGTTTAAAGTTTTGCATGATTAATTTGTTATTAGGCAAACCCAGTTTTTTTTTCTGTTTTAAAAAACCCTTCTTttattgacattataattataataattattataattTGTTACAGGCCGTGGCTAAACATATCTATGGGACACTAAGAAACTCAAGTGTTGTCGTATCCAACTTGATTGGACCAATAGAACCTATGGCTTTGGCAAATCATCCTGTGAAAGGCTTGTATTTCACAATGACTGGTGGACCCGAGAGTATAAATATTGCAGTTATAAGCTACACAAAAACGTTAAGAATTACCTTAAAAACACAGAAAGGGTTTATTGATGAGAAGAAGTTCAAATTCTGCGTGGTGAAAGCCTTTGAGGTCATATCCAAAGCAGCAATGGAGATACCCAACAAAATCAGAGGTTAAATGATCTAAGAATAATTAAAGAGATAGGGGTCGTCTAAGGGAGACTATATATGCTTGGGAGTATGTCCAAGTCAGTTTAATTTCATCAATAAGTAGAGATGGTGGATTCTAATTTTGTCAAGTGTTAGAATGAAATTTAAAAAATCGGCCACTCAAGGCAATAATAATAGCATACATATCGTATGTCCATGTAATTTCTTAGAACAGTGATATCTCCTCCCCGCAAAAGAAATGAAGGATCAATGTTTTCCTTCTTTAGCTTTATTTGATATATACTAAGTCTAGTTGAATTATGGATTTAATATCGCTTTTGGTATATTAGATTTTATAATTGTTTCAATTTAGTACATTAAACCTTATATTTATTAATCAATTTAAC
>Glyma.12g114900.1 sequence-type=CDS polypeptide=Glyma.12g114900.1.p locus=Glyma.12g114900 ID=Glyma.12g114900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGACAACTTCGAAGATGCTACAGAGCCAGTGAGTCCTAGTGGACGATTCTTCAACACCACGGTGCTATGTGCGTATGTTTTTGGCTTCTTAGAATCAGAAGTTCCAATTGAATTCTCTCAAGCCAAGTATTTGTTCGAAGATGTCTTTCTACCCGTCAATCCACACTTTTCTTCCATAATGGTGAGAGATGAAGAAGGAGAAATGAAATGGAAAAGGGTAGAGGTGAAGTTCGAAGATCACGTAAAGATTCCAACGTTCCCCGAAAACGAGTCACTAGAATTGTATGACCAATATTTTGATGACTATGTGACAAAGATATTAATGGAAAGGACACCACAAGATAAACCACTTTGGGAAATTCATGTGATCAAATACCCTACAAGCAATGCTGCTGGCACCTTAATATTCAAACTTCACCATGCACTTGGAGATGGTTACTCCCTAGTGGGTGCTCTTCTCTCTTGTCTTCAGAGAGCTGATGACCCTTCTCTTCCTCTTTCGTTTCCCTCCCGAAAATCCTCGGCATCTTCATCTCCTTCCAAGAAGGGCTTCTTCAGGTTGTTCTCTTCAACTTTGTTCTCCTTTTTTAACTCTATTTCGGATTTTGGATGGAGCATAGTGAAAAGCTCAATTGTTGAAGATGATGAGACACCCATAAGGAGTGGTGAGGAAGGTGTTGAGTCTCTGCCTTGTGTGATATCAAACATATCCTTTGATCTTGATCAAGTGAAGAAAATCAAGTCCAAGCTAGGAGTGACAGTAAACGATGTAATTACTGGGGCAATTTTCTATGGGATTAGGCTGTACATGCAAGAGATTGACAATAAGGCAGGCAAAGCAAATTCCACAGGATTGGTGATGCTTAGTACTAGAAACATTGGAAGTTACCAATCAATCCAAGAAATGATGAAGGCTGATTCCAAATCTCCTTGGGGGAATCATATTTCTTTCTTGCACGTACCCATACCTAAGCTAAGCCAAGCCAGCCTATCCAACCCCCTTGAATTTGTTTGGAAAGCCCAAAAAATAATCAAGAGGAAGAGAAAGTCTTTCACTGTTTTTCTCATTGAATGGCTTTTAGATATGGAGCTGAAATTAAGAGGACACGAGGCCGTGGCTAAACATATCTATGGGACACTAAGAAACTCAAGTGTTGTCGTATCCAACTTGATTGGACCAATAGAACCTATGGCTTTGGCAAATCATCCTGTGAAAGGCTTGTATTTCACAATGACTGGTGGACCCGAGAGTATAAATATTGCAGTTATAAGCTACACAAAAACGTTAAGAATTACCTTAAAAACACAGAAAGGGTTTATTGATGAGAAGAAGTTCAAATTCTGCGTGGTGAAAGCCTTTGAGGTCATATCCAAAGCAGCAATGGAGATACCCAACAAAATCAGAGGTTAA >Glyma.12g114900.2 sequence-type=CDS polypeptide=Glyma.12g114900.2.p locus=Glyma.12g114900 ID=Glyma.12g114900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGACAACTTCGAAGATGCTACAGAGCCAGTGAGTCCTAGTGGACGATTCTTCAACACCACGGTGCTATGTGCGTATGTTTTTGGCTTCTTAGAATCAGAAGTTCCAATTGAATTCTCTCAAGCCAAGTATTTGTTCGAAGATGTCTTTCTACCCGTCAATCCACACTTTTCTTCCATAATGGTGAGAGATGAAGAAGGAGAAATGAAATGGAAAAGGGTAGAGGTGAAGTTCGAAGATCACGTAAAGATTCCAACGTTCCCCGAAAACGAGTCACTAGAATTGTATGACCAATATTTTGATGACTATGTGACAAAGATATTAATGGAAAGGACACCACAAGATAAACCACTTTGGGAAATTCATGTGATCAAATACCCTACAAGCAATGCTGCTGGCACCTTAATATTCAAACTTCACCATGCACTTGGAGATGGTTACTCCCTAGTGGGTGCTCTTCTCTCTTGTCTTCAGAGAGCTGATGACCCTTCTCTTCCTCTTTCGTTTCCCTCCCGAAAATCCTCGGCATCTTCATCTCCTTCCAAGAAGGGCTTCTTCAGGTTGTTCTCTTCAACTTTGTTCTCCTTTTTTAACTCTATTTCGGATTTTGGATGGAGCATAGTGAAAAGCTCAATTGTTGAAGATGATGAGACACCCATAAGGAGTGGTGAGGAAGGTGTTGAGTCTCTGCCTTGTGTGATATCAAACATATCCTTTGATCTTGATCAAGTGAAGAAAATCAAGTCCAAGCTAGGAGTGACAGTAAACGATGTAATTACTGGGGCAATTTTCTATGGGATTAGGCTGTACATGCAAGAGATTGACAATAAGGCAGGCAAAGCAAATTCCACAGGATTGGTGATGCTTAGTACTAGAAACATTGGAAGTTACCAATCAATCCAAGAAATGATGAAGGCTGATTCCAAATCTCCTTGGGGGAATCATATTTCTTTCTTGCACGTACCCATACCTAAGCTAAGCCAAGCCAGCCTATCCAACCCCCTTGAATTTGTTTGGAAAGCCCAAAAAATAATCAAGAGGAAGAGAAAGTCTTTCACTGTTTTTCTCATTGAATGGCTTTTAGATATGGAGCTGAAATTAAGAGGACACGAGGCCGTGGCTAAACATATCTATGGGACACTAAGAAACTCAAGTGTTGTCGTATCCAACTTGATTGGACCAATAGAACCTATGGCTTTGGCAAATCATCCTGTGAAAGGCTTGTATTTCACAATGACTGGTGGACCCGAGAGAGGAGAGATTCGTGAACAAGGTCAAGATCACAAACCATCCTCGTCTTCGAGTTCGTTCCCGGTGCCAGCTTCACCGTCAGCCTCAACAACCATCGTCTTTGGTGCCGTGATCTGA >Glyma.12g114900.3 sequence-type=CDS polypeptide=Glyma.12g114900.3.p locus=Glyma.12g114900 ID=Glyma.12g114900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGACAACTTCGAAGATGCTACAGAGCCAGTGAGTCCTAGTGGACGATTCTTCAACACCACGGTGCTATGTGCGTATGTTTTTGGCTTCTTAGAATCAGAAGTTCCAATTGAATTCTCTCAAGCCAAGTATTTGTTCGAAGATGTCTTTCTACCCGTCAATCCACACTTTTCTTCCATAATGGTGAGAGATGAAGAAGGAGAAATGAAATGGAAAAGGGTAGAGGTGAAGTTCGAAGATCACGTAAAGATTCCAACGTTCCCCGAAAACGAGTCACTAGAATTGTATGACCAATATTTTGATGACTATGTGACAAAGATATTAATGGAAAGGACACCACAAGATAAACCACTTTGGGAAATTCATGTGATCAAATACCCTACAAGCAATGCTGCTGGCACCTTAATATTCAAACTTCACCATGCACTTGGAGATGGTTACTCCCTAGTGGGTGCTCTTCTCTCTTGTCTTCAGAGAGCTGATGACCCTTCTCTTCCTCTTTCGTTTCCCTCCCGAAAATCCTCGGCATCTTCATCTCCTTCCAAGAAGGGCTTCTTCAGGTTGTTCTCTTCAACTTTGTTCTCCTTTTTTAACTCTATTTCGGATTTTGGATGGAGCATAGTGAAAAGCTCAATTGTTGAAGATGATGAGACACCCATAAGGAGTGGTGAGGAAGGTGTTGAGTCTCTGCCTTGTGTGATATCAAACATATCCTTTGATCTTGATCAAGTGAAGAAAATCAAGTCCAAGCTAGGAGTGACAGTAAACGATGTAATTACTGGGGCAATTTTCTATGGGATTAGGCTGTACATGCAAGAGATTGACAATAAGGCAGGCAAAGCAAATTCCACAGGATTGGTGATGCTTAGTACTAGAAACATTGGAAGTTACCAATCAATCCAAGAAATGATGAAGGCTGATTCCAAATCTCCTTGGGGGAATCATATTTCTTTCTTGCACGTACCCATACCTAAGCTAAGCCAAGCCAGCCTATCCAACCCCCTTGAATTTGTTTGGAAAGCCCAAAAAATAATCAAGAGGAAGAGAAAGTCTTTCACTGTTTTTCTCATTGAATGGCTTTTAGATATGGAGCTGAAATTAAGAGGACACGAGGTGGGAGCATACATGTGCCGGTTTAAAGTTTTGCATGATTAA
>Glyma.12g114900.1.p sequence-type=predicted peptide transcript=Glyma.12g114900.1 locus=Glyma.12g114900 ID=Glyma.12g114900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MDNFEDATEPVSPSGRFFNTTVLCAYVFGFLESEVPIEFSQAKYLFEDVFLPVNPHFSSIMVRDEEGEMKWKRVEVKFEDHVKIPTFPENESLELYDQYFDDYVTKILMERTPQDKPLWEIHVIKYPTSNAAGTLIFKLHHALGDGYSLVGALLSCLQRADDPSLPLSFPSRKSSASSSPSKKGFFRLFSSTLFSFFNSISDFGWSIVKSSIVEDDETPIRSGEEGVESLPCVISNISFDLDQVKKIKSKLGVTVNDVITGAIFYGIRLYMQEIDNKAGKANSTGLVMLSTRNIGSYQSIQEMMKADSKSPWGNHISFLHVPIPKLSQASLSNPLEFVWKAQKIIKRKRKSFTVFLIEWLLDMELKLRGHEAVAKHIYGTLRNSSVVVSNLIGPIEPMALANHPVKGLYFTMTGGPESINIAVISYTKTLRITLKTQKGFIDEKKFKFCVVKAFEVISKAAMEIPNKIRG* >Glyma.12g114900.2.p sequence-type=predicted peptide transcript=Glyma.12g114900.2 locus=Glyma.12g114900 ID=Glyma.12g114900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 MDNFEDATEPVSPSGRFFNTTVLCAYVFGFLESEVPIEFSQAKYLFEDVFLPVNPHFSSIMVRDEEGEMKWKRVEVKFEDHVKIPTFPENESLELYDQYFDDYVTKILMERTPQDKPLWEIHVIKYPTSNAAGTLIFKLHHALGDGYSLVGALLSCLQRADDPSLPLSFPSRKSSASSSPSKKGFFRLFSSTLFSFFNSISDFGWSIVKSSIVEDDETPIRSGEEGVESLPCVISNISFDLDQVKKIKSKLGVTVNDVITGAIFYGIRLYMQEIDNKAGKANSTGLVMLSTRNIGSYQSIQEMMKADSKSPWGNHISFLHVPIPKLSQASLSNPLEFVWKAQKIIKRKRKSFTVFLIEWLLDMELKLRGHEAVAKHIYGTLRNSSVVVSNLIGPIEPMALANHPVKGLYFTMTGGPERGEIREQGQDHKPSSSSSSFPVPASPSASTTIVFGAVI* >Glyma.12g114900.3.p sequence-type=predicted peptide transcript=Glyma.12g114900.3 locus=Glyma.12g114900 ID=Glyma.12g114900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 MDNFEDATEPVSPSGRFFNTTVLCAYVFGFLESEVPIEFSQAKYLFEDVFLPVNPHFSSIMVRDEEGEMKWKRVEVKFEDHVKIPTFPENESLELYDQYFDDYVTKILMERTPQDKPLWEIHVIKYPTSNAAGTLIFKLHHALGDGYSLVGALLSCLQRADDPSLPLSFPSRKSSASSSPSKKGFFRLFSSTLFSFFNSISDFGWSIVKSSIVEDDETPIRSGEEGVESLPCVISNISFDLDQVKKIKSKLGVTVNDVITGAIFYGIRLYMQEIDNKAGKANSTGLVMLSTRNIGSYQSIQEMMKADSKSPWGNHISFLHVPIPKLSQASLSNPLEFVWKAQKIIKRKRKSFTVFLIEWLLDMELKLRGHEVGAYMCRFKVLHD*
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