SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.12g081300

Feature Type:gene_model
Chromosome:Gm12
Start:6398964
stop:6403190
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g081300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G28190.1AT CSD2,CZSOD2 JGI N/AIEA
1.15.1.1EC superoxide dismutase JGI N/AIEA
GO:0006801GO-bp superoxide metabolic process JGI N/AIEA
GO:0034599GO-bp cellular response to oxidative stress JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0071486GO-bp cellular response to high light intensity JGI N/AIEA
GO:0009507GO-cc chloroplast JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
K04565KEGG Pathways of neurodegeneration - multiple diseases JGI N/AIEA
KOG0441 KOG Cu2+/Zn2+ superoxide dismutase SOD1 JGI N/AIEA
PTHR10003PantherFam SUPEROXIDE DISMUTASE CU-ZN -RELATED JGI N/AIEA
PF00080Pfam Copper/zinc superoxide dismutase (SODC) JGI N/AIEA

Gene model name correspondences to Glyma.12g081300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g08650 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g081300
>Glyma.12g081300.1 sequence-type=CDS polypeptide=Glyma.12g081300.1.p locus=Glyma.12g081300 id=Glyma.12g081300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCAGCTAGCTGTGGCGGCCAACGCTGTCGTTTCACCGTCGCCGTTCCGACCTCATCCCCTTCTCCGGTCATCCTTCTCCGGCGTCTCCGTTAAGCTCACTCCCCAATCCATAACGTTTTCACGCTTGAAGCCCCTCACCGTCTTCGCCGCCACCAAGAAGGCCGTCGCTGTCCTCAAGGGGACCTCCGCCGTCGAAGGCGTCGCCACTCTCATCCAAGAAGACGATGGCCCGACGACAGTTTCTGTTAGCATCACTGGCCTTACTCCGGGGCTTCATGGTTTTCACCTACATGAGTATGGTGATACCACAAATGGGTGTATATCAACAGGAGCACATTTTAATCCTAATAACTTGACACATGGTGCTCCTGAGGATGAAGTCCGTCATGCGGGTGACCTGGGAAACATAGTTGCTAATGCAGAGGGGGTTGCAGAGGCTACAATTGTGGATAATCAGATACCACTCTCTGGCCCTAATTCAGTAGTTGGAAGAGCCTTGGTGGTCCATGAGCTTGAGGATGACCTTGGAAAGGGTGGGCATGAACTCAGTTTGACAACTGGAAATGCTGGTGGAAGATTAGCGTGTGGTGTGGTTGGTTTGACTCCAGCATAA
Predicted protein sequences of Glyma.12g081300
>Glyma.12g081300.1.p sequence-type=predicted peptide transcript=Glyma.12g081300.1 locus=Glyma.12g081300 id=Glyma.12g081300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MQLAVAANAVVSPSPFRPHPLLRSSFSGVSVKLTPQSITFSRLKPLTVFAATKKAVAVLKGTSAVEGVATLIQEDDGPTTVSVSITGLTPGLHGFHLHEYGDTTNGCISTGAHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo