Glyma.12g075000

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Report for Sequence Feature Glyma.12g075000

Feature Type:	gene_model
Chromosome:	Gm12
Start:	5674766
stop:	5680512
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.12g075000

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G46200.1	AT	nudix hydrolase homolog 9	JGI	N/A	IEA
GO:0016787	GO-mf	hydrolase activity	EnsemblGenomes	N/A	IEA
GO:0016787	GO-mf	hydrolase activity	JGI	N/A	IEA
PF00293	PFAM	NUDIX domain	JGI	N/A	IEA
PWY-6502	SoyCyc9	oxidized GTP and dGTP detoxification	Plant Metabolic Network		ISS
GN7V-66363	SoyCyc9-rxn	8-oxo-dGTP diphosphatase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.12g075000

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.12g075000 not represented in the dataset	Glyma.12g075000 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.12g075000 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma12g08000	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.12g075000

Limit To All Plant Sequences

>Glyma.12g075000.2 sequence-type=transcript locus=Glyma.12g075000 ID=Glyma.12g075000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGCATCGTCGACGTTGCGATGGAGAAGGAAGCGAGTAGCACCGACGACCCTTCTTCGTTCACGCTTCTAGTGTCGTGTCCTTCCGGCCTTTCACCTTCACAGGTTTCTGTGGCATTCAGCGACGCCTACGACCGGATCCCCCACTCTGACGTCATCTTGGAGAACACGATTTCCGAGATATGGAAGCAGAGGAGTCAGAAGAACAATTCGCTCTTCAATGGGAAGAAGTTCAGGGACTTTTGTGGGGACAAATTTAAGTCCTTTGTGGGAAAGGTTCCTGGTTCCATCAGAAGATGATTCTGTTCTTTGTCAGCACACCTCCAATCCACTAGGAAATGGTGCAGTGGTGGAAACAAATGACAACAAAATACTTGTATTACAACGAAGTGATAATGTTGGTGAATTTCCTGGACATTTTGTTTTCCCTGGAGGCCATCCTGAGCCTCAAGAAATTGGTATAACATCTCATCAATATAACAAGGAGTTAACAGAATCTATTAACACTAAGGTTTCACAGGAGATGTTTGACAGCATTGTTCGTGAAGTAGTTGAAGAAATTGGAGTGCCGGCTTCATCCCTTAGCATCCCGGCTTTCATTGGTATATCTCGCAGGAACTTGAATGTTAGACCAGCTGCATTTTTCTTTATTAAATGCGGTCTTGACTCAAAGGAAGTTCGGCAGTTTTATTCAAGTGCACAAGATGGCTATGAGTCAACTCAGCTATATGCTGTTCCAATGATTGAAATAGAAAACATGACTTCTAGGATGCCTGGCTGTCATCGAGGTGGATTTGCCCTCTATAAATTGATGGTTGACACCAGGAAGATTACTTGATGGAAATTTGTAGCACTCACAGGTGTCAAGAATCGTAGTTGCTTGCCTTCAAGGATTTTTCCTGCGTGATGTAGTTTGATGCTGACATTACCGAGTTGAACCTCCACTTCCCCGCCCAATGAAAGAGACATAATTTAACCGAGTGCAAATCTTCCCACTGAATAGTGAATGCTACAGAATTTCTATTTCATTGCAATAGATTATACTCATGCTTGTTTTCAATTCATACCCAAATAAAATGAGGACAAAACTAAGATGCAATTGTTTAGGACCTTGGGTATTTTTAGTATTATTCTTAAATTAGAAATAGAGTGTCGTCTTGATAATTAATTGTGTAGTAAAGGTTTCCATTAAATGTCAACACAAATAATTGAGGTGAAATTTTAATGCTAATTAGAGAACAACATCAAAATACCTATAGAACTACATCAAAGTTTCGCCGAAAAGTAAATAAGCCAATCTATTCTTGTATTTATATTTTATAGCATTATCATTTCGAATGGCTTCTACCCGATGGTCACCCTACAAAACACGGGTTGGCGTACTAGAGCTCAAGTGGCTCAATCTGCA

>Glyma.12g075000.3 sequence-type=transcript locus=Glyma.12g075000 ID=Glyma.12g075000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGCATCGTCGACGTTGCGATGGAGAAGGAAGCGAGTAGCACCGACGACCCTTCTTCGTTCACGCTTCTAGTGTCGTGTCCTTCCGGCCTTTCACCTTCACAGGTTTCTGTGGCATTCAGCGACGCCTACGACCGGATCCCCCACTCTGACGTCATCTTGGAGAACACGATTTCCGAGATATGGAAGCAGAGGAGTCAGAAGAACAATTCGCTCTTCAATGGGAAGAAGTTCAGGTATGGAGGGTGTGTTTTGCATGCCAAAGATGGATCCGACCATGAATGTGAACCGCATTTATGCCTCCATCTAGGTTTGACAGATTACAGGACTTTTGTGGGGACAAATTTAAGTCCTTTGTGGGAAAGGTTCCTGGTTCCATCAGAAGATGATTCTGTTCTTTGTCAGCACACCTCCAATCCACTAGGAAATGGTGCAGTGGTGGAAACAAATGACAACAAAATACTTGTATTACAACGAAGTGATAATGTTGGTGAATTTCCTGGACATTTTGTTTTCCCTGGAGGCCATCCTGAGGAGATGTTTGACAGCATTGTTCGTGAAGTAGTTGAAGAAATTGGAGTGCCGGCTTCATCCCTTAGCATCCCGGCTTTCATTGGTATATCTCGCAGGAACTTGAATGTTAGACCAGCTGCATTTTTCTTTATTAAATGCGGTCTTGACTCAAAGGAAGTTCGGCAGTTTTATTCAAGTGCACAAGATGGCTATGAGTCAACTCAGCTATATGCTGTTCCAATGATTGAAATAGAAAACATGACTTCTAGGATGCCTGGCTGTCATCGAGGTGGATTTGCCCTCTATAAATTGATGGTTGACACCAGGAAGATTACTTGATGGAAATTTGTAGCACTCACAGGTGTCAAGAATCGTAGTTGCTTGCCTTCAAGGATTTTTCCTGCGTGATGTAGTTTGATGCTGACATTACCGAGTTGAACCTCCACTTCCCCGCCCAATGAAAGAGACATAATTTAACCGAGTGCAAATCTTCCCACTGAATAGTGAATGCTACAGAATTTCTATTTCATTGCAATAGATTATACTCATGCTTGTTTTCAATTCATACCCAAATAAAATGAGGACAAAACTAAGATGCAATTGTTTAGGACCTTGGGTATTTTTAGTATTATTCTTAAATTAGAAATAGAGTGTCGTCTTGATAATTAATTGTGTAGTAAAGGTTTCCATTAAATGTCAACACAAATAATTGAGGTGAAATTTTAATGCTAATTAGAGAACAACATCAAAATACCTATAGAACTACATCAAAGTTTCGCCGAAAAGTAAATAAGCCAATCTATTCTTGTATTTATATTTTATAGCATTATCATTTCGAATGGCTTCTACCCGATGGTCACCCTACAAAACACGGGTTGGCGTACTAGAGCTCAAGTGGCTCAATCTGCA

>Glyma.12g075000.4 sequence-type=transcript locus=Glyma.12g075000 ID=Glyma.12g075000.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGCATCGTCGACGTTGCGATGGAGAAGGAAGCGAGTAGCACCGACGACCCTTCTTCGTTCACGCTTCTAGTGTCGTGTCCTTCCGGCCTTTCACCTTCACAGGTTTCTGTGGCATTCAGCGACGCCTACGACCGGATCCCCCACTCTGACGTCATCTTGGAGAACACGATTTCCGAGATATGGAAGCAGAGGAGTCAGAAGAACAATTCGCTCTTCAATGGGAAGAAGTTCAGGTATGGAGGGTGTGTTTTGCATGCCAAAGATGGATCCGACCATGAATGTGAACCGCATTTATGCCTCCATCTAGGTTTGACAGATTACAGGACTTTTGTGGGGACAAATTTAAGTCCTTTGTGGGAAAGGTTCCTGGTTCCATCAGAAGATGATTCTGTTCTTTGTCAGCACACCTCCAATCCACTAGGAAATGGTGCAGTGGTGGAAACAAATGACAACAAAATACTTGTATTACAACGAAGTGATAATGTTGGTGAATTTCCTGGACATTTTGTTTTCCCTGGAGGCCATCCTGAGATATGTAATCTAAGAAGCACGGACGCGGCACTTCAACGGTGTGTTCGGTGTTGGACTAACGCCAGACACGGATGCGGACCCGACTCGTATGCGATGCGGTATCAGGTGCGTTCACCGTCGCTGGACATGGTTGGGCCGACGGACATGCGTGATTGGACGAGGACACGTTAGCTATTTGTCGACAGAGGGAGACGACGACAAGATGCGCAAAGGGAGAATGTTGTCGGTTGCTTTGTGGCCGTCAATAATGGCAACATTGTCCGTGGTTCCTCCGTTTTGGTCAGCAGAGGGTTTGACTAAACTTGGGTGGAGAATGTGCTCCTGTGGTGCCTCTTCAACTGCGACATTGTTTCGGGGATGACGCTCAACGGTGTGTTGAAGTTGGGGAAGGCCGAGGCACATCCAGATCTGTGAGAAAgattttggatttttgaatttttgttacgattggttgtaattttggattttggttatgattggttaggattttggattttgaatCTGGTTGAATTTTTATTTCTTTTCTACCTTGTGGAACTGTTACTTGCTAATCTATTTATTGTGAAATTTAATCAATATCG

Coding sequences of Glyma.12g075000

Limit To All Plant Sequences

>Glyma.12g075000.1 sequence-type=CDS polypeptide=Glyma.12g075000.1.p locus=Glyma.12g075000 ID=Glyma.12g075000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAAGGAAGCGAGTAGCACCGACGACCCTTCTTCGTTCACGCTTCTAGTGTCGTGTCCTTCCGGCCTTTCACCTTCACAGGTTTCTGTGGCATTCAGCGACGCCTACGACCGGATCCCCCACTCTGACGTCATCTTGGAGAACACGATTTCCGAGATATGGAAGCAGAGGAGTCAGAAGAACAATTCGCTCTTCAATGGGAAGAAGTTCAGGTATGGAGGGTGTGTTTTGCATGCCAAAGATGGATCCGACCATGAATGTGAACCGCATTTATGCCTCCATCTAGGTTTGACAGATTACAGGACTTTTGTGGGGACAAATTTAAGTCCTTTGTGGGAAAGGTTCCTGGTTCCATCAGAAGATGATTCTGTTCTTTGTCAGCACACCTCCAATCCACTAGGAAATGGTGCAGTGGTGGAAACAAATGACAACAAAATACTTGTATTACAACGAAGTGATAATGTTGGTGAATTTCCTGGACATTTTGTTTTCCCTGGAGGCCATCCTGAGCCTCAAGAAATTGGTATAACATCTCATCAATATAACAAGGAGTTAACAGAATCTATTAACACTAAGGTTTCACAGGAGATGTTTGACAGCATTGTTCGTGAAGTAGTTGAAGAAATTGGAGTGCCGGCTTCATCCCTTAGCATCCCGGCTTTCATTGGTATATCTCGCAGGAACTTGAATGTTAGACCAGCTGCATTTTTCTTTATTAAATGCGGTCTTGACTCAAAGGAAGTTCGGCAGTTTTATTCAAGTGCACAAGATGGCTATGAGTCAACTCAGCTATATGCTGTTCCAATGATTGAAATAGAAAACATGACTTCTAGGATGCCTGGCTGTCATCGAGGTGGATTTGCCCTCTATAAATTGATGGTTGACACCAGGAAGATTACTTGA

>Glyma.12g075000.2 sequence-type=CDS polypeptide=Glyma.12g075000.2.p locus=Glyma.12g075000 ID=Glyma.12g075000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAAGAAGTTCAGGGACTTTTGTGGGGACAAATTTAAGTCCTTTGTGGGAAAGGTTCCTGGTTCCATCAGAAGATGATTCTGTTCTTTGTCAGCACACCTCCAATCCACTAGGAAATGGTGCAGTGGTGGAAACAAATGACAACAAAATACTTGTATTACAACGAAGTGATAATGTTGGTGAATTTCCTGGACATTTTGTTTTCCCTGGAGGCCATCCTGAGCCTCAAGAAATTGGTATAACATCTCATCAATATAACAAGGAGTTAACAGAATCTATTAACACTAAGGTTTCACAGGAGATGTTTGACAGCATTGTTCGTGAAGTAGTTGAAGAAATTGGAGTGCCGGCTTCATCCCTTAGCATCCCGGCTTTCATTGGTATATCTCGCAGGAACTTGAATGTTAGACCAGCTGCATTTTTCTTTATTAAATGCGGTCTTGACTCAAAGGAAGTTCGGCAGTTTTATTCAAGTGCACAAGATGGCTATGAGTCAACTCAGCTATATGCTGTTCCAATGATTGAAATAGAAAACATGACTTCTAGGATGCCTGGCTGTCATCGAGGTGGATTTGCCCTCTATAAATTGATGGTTGACACCAGGAAGATTACTTGA

>Glyma.12g075000.3 sequence-type=CDS polypeptide=Glyma.12g075000.3.p locus=Glyma.12g075000 ID=Glyma.12g075000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAAGGAAGCGAGTAGCACCGACGACCCTTCTTCGTTCACGCTTCTAGTGTCGTGTCCTTCCGGCCTTTCACCTTCACAGGTTTCTGTGGCATTCAGCGACGCCTACGACCGGATCCCCCACTCTGACGTCATCTTGGAGAACACGATTTCCGAGATATGGAAGCAGAGGAGTCAGAAGAACAATTCGCTCTTCAATGGGAAGAAGTTCAGGTATGGAGGGTGTGTTTTGCATGCCAAAGATGGATCCGACCATGAATGTGAACCGCATTTATGCCTCCATCTAGGTTTGACAGATTACAGGACTTTTGTGGGGACAAATTTAAGTCCTTTGTGGGAAAGGTTCCTGGTTCCATCAGAAGATGATTCTGTTCTTTGTCAGCACACCTCCAATCCACTAGGAAATGGTGCAGTGGTGGAAACAAATGACAACAAAATACTTGTATTACAACGAAGTGATAATGTTGGTGAATTTCCTGGACATTTTGTTTTCCCTGGAGGCCATCCTGAGGAGATGTTTGACAGCATTGTTCGTGAAGTAGTTGAAGAAATTGGAGTGCCGGCTTCATCCCTTAGCATCCCGGCTTTCATTGGTATATCTCGCAGGAACTTGAATGTTAGACCAGCTGCATTTTTCTTTATTAAATGCGGTCTTGACTCAAAGGAAGTTCGGCAGTTTTATTCAAGTGCACAAGATGGCTATGAGTCAACTCAGCTATATGCTGTTCCAATGATTGAAATAGAAAACATGACTTCTAGGATGCCTGGCTGTCATCGAGGTGGATTTGCCCTCTATAAATTGATGGTTGACACCAGGAAGATTACTTGA

>Glyma.12g075000.4 sequence-type=CDS polypeptide=Glyma.12g075000.4.p locus=Glyma.12g075000 ID=Glyma.12g075000.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAAGGAAGCGAGTAGCACCGACGACCCTTCTTCGTTCACGCTTCTAGTGTCGTGTCCTTCCGGCCTTTCACCTTCACAGGTTTCTGTGGCATTCAGCGACGCCTACGACCGGATCCCCCACTCTGACGTCATCTTGGAGAACACGATTTCCGAGATATGGAAGCAGAGGAGTCAGAAGAACAATTCGCTCTTCAATGGGAAGAAGTTCAGGTATGGAGGGTGTGTTTTGCATGCCAAAGATGGATCCGACCATGAATGTGAACCGCATTTATGCCTCCATCTAGGTTTGACAGATTACAGGACTTTTGTGGGGACAAATTTAAGTCCTTTGTGGGAAAGGTTCCTGGTTCCATCAGAAGATGATTCTGTTCTTTGTCAGCACACCTCCAATCCACTAGGAAATGGTGCAGTGGTGGAAACAAATGACAACAAAATACTTGTATTACAACGAAGTGATAATGTTGGTGAATTTCCTGGACATTTTGTTTTCCCTGGAGGCCATCCTGAGATATGTAATCTAAGAAGCACGGACGCGGCACTTCAACGGTGTGTTCGGTGTTGGACTAACGCCAGACACGGATGCGGACCCGACTCGTATGCGATGCGGTATCAGGTGCGTTCACCGTCGCTGGACATGGTTGGGCCGACGGACATGCGTGATTGGACGAGGACACGTTAG

Predicted protein sequences of Glyma.12g075000

Limit To All Plant Sequences

>Glyma.12g075000.1.p sequence-type=predicted peptide transcript=Glyma.12g075000.1 locus=Glyma.12g075000 ID=Glyma.12g075000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEKEASSTDDPSSFTLLVSCPSGLSPSQVSVAFSDAYDRIPHSDVILENTISEIWKQRSQKNNSLFNGKKFRYGGCVLHAKDGSDHECEPHLCLHLGLTDYRTFVGTNLSPLWERFLVPSEDDSVLCQHTSNPLGNGAVVETNDNKILVLQRSDNVGEFPGHFVFPGGHPEPQEIGITSHQYNKELTESINTKVSQEMFDSIVREVVEEIGVPASSLSIPAFIGISRRNLNVRPAAFFFIKCGLDSKEVRQFYSSAQDGYESTQLYAVPMIEIENMTSRMPGCHRGGFALYKLMVDTRKIT*

>Glyma.12g075000.2.p sequence-type=predicted peptide transcript=Glyma.12g075000.2 locus=Glyma.12g075000 ID=Glyma.12g075000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGRSSGTFVGTNLSPLWERFLVPSEDDSVLCQHTSNPLGNGAVVETNDNKILVLQRSDNVGEFPGHFVFPGGHPEPQEIGITSHQYNKELTESINTKVSQEMFDSIVREVVEEIGVPASSLSIPAFIGISRRNLNVRPAAFFFIKCGLDSKEVRQFYSSAQDGYESTQLYAVPMIEIENMTSRMPGCHRGGFALYKLMVDTRKIT*

>Glyma.12g075000.3.p sequence-type=predicted peptide transcript=Glyma.12g075000.3 locus=Glyma.12g075000 ID=Glyma.12g075000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEKEASSTDDPSSFTLLVSCPSGLSPSQVSVAFSDAYDRIPHSDVILENTISEIWKQRSQKNNSLFNGKKFRYGGCVLHAKDGSDHECEPHLCLHLGLTDYRTFVGTNLSPLWERFLVPSEDDSVLCQHTSNPLGNGAVVETNDNKILVLQRSDNVGEFPGHFVFPGGHPEEMFDSIVREVVEEIGVPASSLSIPAFIGISRRNLNVRPAAFFFIKCGLDSKEVRQFYSSAQDGYESTQLYAVPMIEIENMTSRMPGCHRGGFALYKLMVDTRKIT*

>Glyma.12g075000.4.p sequence-type=predicted peptide transcript=Glyma.12g075000.4 locus=Glyma.12g075000 ID=Glyma.12g075000.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEKEASSTDDPSSFTLLVSCPSGLSPSQVSVAFSDAYDRIPHSDVILENTISEIWKQRSQKNNSLFNGKKFRYGGCVLHAKDGSDHECEPHLCLHLGLTDYRTFVGTNLSPLWERFLVPSEDDSVLCQHTSNPLGNGAVVETNDNKILVLQRSDNVGEFPGHFVFPGGHPEICNLRSTDAALQRCVRCWTNARHGCGPDSYAMRYQVRSPSLDMVGPTDMRDWTRTR*

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