SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.12g074900

Feature Type:gene_model
Chromosome:Gm12
Start:5643368
stop:5647938
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g074900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G07710.1AT JGI N/AIEA
KOG0502 KOG Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) JGI N/AIEA
KOG4412 KOG 26S proteasome regulatory complex, subunit PSMD10 JGI N/AIEA
PTHR24186PantherFam PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT JGI N/AIEA
PF12796Pfam Ankyrin repeats (3 copies) JGI N/AIEA
PF13962Pfam Domain of unknown function JGI N/AIEA

Gene model name correspondences to Glyma.12g074900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g07990 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g074900
>Glyma.12g074900.1 sequence-type=CDS polypeptide=Glyma.12g074900.1.p locus=Glyma.12g074900 id=Glyma.12g074900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACACACCAAATGCACAGCCGCAAGCTGCATCAGCAAGCACGCCAAGGAAAAAAATGACAAAGCAATTGACAGGTAAAAGGGATGATACACCTTTGCACTCTGCAGCAAGAGCAGGGAATATGACTGTTCTGAAAGACACGGTTGGTGGCACTGAAGAGGGTGAACTACGTGTGTTGCTGACAAAGCAGAACCATGCCGGAGAAACGGTTCTTTATGTTGCTGCTGAATATGGTTATGTTGATATGGTTAGAGAGCTGATTCAATATTATGATCTTGCTGGGGCGGGAATTAAGGCCAGGAATGGGTTTGATGCACTCCACATTGCTGCCAAACAAGGGGATTTAGATATTGTGAAGATCTTAATGGAGGCTCATCCTGAATTGTCAATGACTGTGGATCCATCCAACACCACAGCAGTGCACACCGCTGCATTACAAGGGCATACTGAGATAGTGAAGCTTCTATTGGAAGCAGGTAGTAATCTGGCAACCATTTCTAGAAGTAATGGGAAAACAGCTTTGCATTCTGCTGCGAGAAATGGACATTTGGAGGTTGTGAAAGCGCTTCTGGGGAAGGAGCCTTCAGTTGCAACACGGACTGATAAGAAGGGACAAACAGCAATTCACATGGCAGTGAAGGGACAGAGTCTTGAGGTGGTGGAGGAGTTGATAAAAGCTGATCCCTCAACAATAAACATGGTTGATAATAAGGGTAACACAGCATTGCATATAGCAACCAGGAAGGGCAGGGCTCGGATTGTTAAGTTGCTTCTTGGGCAGACAGAAACCGATGCCTTGGTAGTTAACAGATCCGGCGAAACTGCACTAGACACAGCTGAGAAAACTGGTAACTCTGAAGTTAAAGACATTCTCCTGGAACATGGTGTCCGAAGAGCCAAAGCCATAAAGGCTCAACCAGGAACAGCCACAGCCCGAGAGTTGAAACAGACTGTGAGTGACATAAAGCATGAAGTCCACTACCAGTTGGAACACACGCGCCAAACTCGAAGAGGTGTTCAAGGCATTGCCAAACGCATCAACAAAATGCATACTGAAGGACTCAACAATGCAATAAACTCCACAACTGTGGTTGCAGTCCTCATTGCCACAGTTGCCTTTGCAGCAATCTTCACAGTCCCCGGCCAATTTGCTGATGAACCAAAAGACATCCCTGCAGGTTCAGGAATGACCATTGGTGAAGCAAACATAGCCCCACAAGCTGCATTTCTCATTTTCTTCGTCTTTGATTCCATCGCCCTCTTCATTTCTCTGGCCGTGGTGGTGGTGCAAACCTCGGTTGTGATCATAGAAAGCAAAGCAAAGAAGCAGATGATGGCCATCATTAACAAGCTAATGTGGTTGGCTTGTGTGCTTATTTCTGTGGCCTTCTTGGCACTGTCATTTGTAGTGGTGGGGAAGGATCAGAAGTGGCTTGCAATTGGAGTCACTATCATAGGGACAACTATAATGGCCACAACTTTGGGCACCATGAGTTACTGGGTCATTAGGCATCGCATTGAGGCCTCAAACTTAAGGAGCATTCGGAAATCTTCAATGGGAAGCAGGTCAAGGTCTTTTTCAGTATCAGTTATGTCAGATTCTGAGCTACTAAACAATGACCGCAAGATATTGTATGCCATATAG
Predicted protein sequences of Glyma.12g074900
>Glyma.12g074900.1.p sequence-type=predicted peptide transcript=Glyma.12g074900.1 locus=Glyma.12g074900 id=Glyma.12g074900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDTPNAQPQAASASTPRKKMTKQLTGKRDDTPLHSAARAGNMTVLKDTVGGTEEGELRVLLTKQNHAGETVLYVAAEYGYVDMVRELIQYYDLAGAGIKARNGFDALHIAAKQGDLDIVKILMEAHPELSMTVDPSNTTAVHTAALQGHTEIVKLLLEAGSNLATISRSNGKTALHSAARNGHLEVVKALLGKEPSVATRTDKKGQTAIHMAVKGQSLEVVEELIKADPSTINMVDNKGNTALHIATRKGRARIVKLLLGQTETDALVVNRSGETALDTAEKTGNSEVKDILLEHGVRRAKAIKAQPGTATARELKQTVSDIKHEVHYQLEHTRQTRRGVQGIAKRINKMHTEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFADEPKDIPAGSGMTIGEANIAPQAAFLIFFVFDSIALFISLAVVVVQTSVVIIESKAKKQMMAIINKLMWLACVLISVAFLALSFVVVGKDQKWLAIGVTIIGTTIMATTLGTMSYWVIRHRIEASNLRSIRKSSMGSRSRSFSVSVMSDSELLNNDRKILYAI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo