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Report for Sequence Feature Glyma.12g060600

Feature Type:gene_model
Chromosome:Gm12
Start:4370937
stop:4378335
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g060600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G29190.1AT APUM2,PUM2 JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
K17943KEGG Spinocerebellar ataxia JGI N/AIEA
PTHR12537PantherFam RNA BINDING PROTEIN PUMILIO-RELATED JGI N/AIEA
PF00806Pfam Pumilio-family RNA binding repeat JGI N/AIEA
PF07990Pfam Nucleic acid binding protein NABP JGI N/AIEA

Gene model name correspondences to Glyma.12g060600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g06450 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g060600
>Glyma.12g060600.3 sequence-type=CDS polypeptide=Glyma.12g060600.3.p locus=Glyma.12g060600 id=Glyma.12g060600.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTGTCTGAATTGGGAAGAAGACCTATGCTTGGAAGTAACGAGGGTTCTTTTGGTGATGAATTGGAGAAAGAGATAGGGATGTTACTTCGTGAGCAACGCAGACAAGAGGCTGATGATCGTGAGCGAGAGCTTAATATTTTTAGGAGTGGATCGGCACCTCCAACTGTGGAGGGTTCTTTGAGTGCCGTTGGAGGGTTGTTTGCTGCTGGTGGTGGTGGTGGTCCTGCTACTGGTGCTCCTGCTGCCTTTTTGGAGTTTCGAGGAGCGAAGGATGTGAATGGGATTGCTTCTGAGGAAGAGCTTAGGTCTGATCCAGCGTATCTTTCATACTACTACTCCAATGTGAATTTGAATCCTAGGCTGCCACCTCCTTTGCTGTCAAAGGAGGATTGGAGATTTCAACAAAGACTTAAAGGTGGAGCTTCTGCTCTAGGTGGAATTGGAGATAGGAGGAAAGTGAACAGGACTGATGATAATGCTGGAAGATTGCTTTTTGCTACCCCACCAGGTTTTAACATGAGGAAACTAGAGAGTGAGGTGGATAATGAAAAAACAAGAGGTTCGGCCGAGTGGGGTGGTGATGGACTGATTGGTTTGCCTGGACTAGGGCTGAGCAAACAGAAGAGCTTTGCAGAATTTTTTCAGGATGATTTGGGGCATAATACCTCTATCACACGCCTTCCTTCTCGCCCAGCCAGTCGTAATGCATTTGATGAAAATGATATCATTAGTTCTGCTGAACCAGAGTTGGCTCATGTACGTCGTGAGTCCACTCCCACTGATGCACTAAGGTCAGGATCAAATGTTCAAGGATCATCTGCAGCCCAAAATGTTGGCTTACCAGCTTCATATTCTTATGCTGCTGCAGTAGGATCTTCCTTGTCAAGAAGCACTACTCCTGATCCACAACTTATTGCTAGGGCTCCCAGTCCCTGCATCACTCCCATTGGTGGCGGCAGAGCCATTGCTTCTGACAAGAGAGCTATTGCCAATCCAGATGCATTTAATGGTGTTTCATCTGGCATCAATGAGTCAGCAGATCTTGTGGCTGCATTATCAGTGATGAACTTGTCAGCAGATGATGTGTTAGATGGTGAAAACCATTTCCCATCACAAGTTGAATCAGATGTAGATAGTCATCAGAGATATCTTTTTGGTAGGCAAGGTGGTCAGGATCATGGGAAGCAACAGGCTTATTTAAAGAAATCTGAATCAGCACACTTGCAAAATTCAAGTAAGAGCAGCAGGAGTGGATCAGGTCTCAACAATCCATCCTTGGATAGGCAGGTTGAGCTACAAAAGTCTACTGTTCCTTCCAATAACTCATACTTCAAAGGATCGCCTACCTCCCATTTTAGTGGAGGAGGAAGTATGCCACCTCAGTACCAGCCTTTAGATGGTACAAATTCATCATTTACTAACTATGGTATGAGTGGCTATGCTGGAAATCCAGCATTGGCATCCTTGATGACTAACCAACTAGGCACTGGTAATCTGCCACCCTTGTTTCAAAATGTTGCTGCGGCATCAGCAATGGCTGCCCCTGGAATGGACTCGAGAATTCTTGGATGTGGTTTGGCTTCTGGAACTGCTGCTCCATCTGATGTGCATAATCTTGGTAGGATGGGAAATCAAATTCAAGGCAGTGCTCTTCAGGCTCCTTTTGTCGATCCCATGTATCTTCAGTACCTGAGGACGTCTGAGTTTGCTGCAGCACAACTTGCTGCTCTCAATGACCCCTCTGTGGACAGGAACTACTTGGGCAATTCATACATGAATTTGCTTGAGCTCCAGAAAGCTTATCTTGGGTCTGTCCTCTCACCTCAGAAATCCCAATACAATGTACCGCCGGGTGGTAAATCAGGCAGCTTCACTCCTCATGGTTATTATGGAAATCCTGCATATGGTGCTGGGTTGTCTTACCCAGGAAGTCCTATGGCAAACTCTGTTGTGTCCACTTCTCCAGTTGGATCTGGAAGTCCTGTTAGGCACAATGAACTGAATATGCATTTTGCTTCTGGAATGAGGAATTTAGCTGGGGTCATGGGACCTTGGCATGTAGATAATGAGAACATTGATGAAAGTTTTGCTTCTTCTCTGTTGGAAGAGTTTAAAAGCAATAAAACGAAGTGTTTTGAGCTGTCTGAAATTGCTGGTCATGTTGTTGAATTCAGTGCGGATCAATACGGGAGTCGATTTATTCAACAAAAGCTTGAAACAGCTACTACAGAAGAAAAAAACATGGTTTATCAGGAAATCATGCCACATGCCCTTGCTTTGATGACTGATGTCTTTGGTAATTATGTGGTTCAAAAGTTTTTTGAGCATGGACTTGCATCCCAGAGAAGAGAATTAGCCAACAAACTTCTTGGCCATGTTCTGACACTTAGCCTTCAAATGTATGGTTGCCGTGTCATCCAGAAGGCCATCGAAGTTGTTGATCTGGATCAGAAGATAGAGATGGTTCAAGAGCTTGATGGTAATGTTATGCGCTGTGTACGTGATCAGAATGGTAATCATGTCATTCAGAAGTGTATTGAATGTGTCCCTGAAGATGCAATCCACTTTATTGTGTCAACATTTTTTGATCAAGTTGTGACACTCTCAACCCATCCATATGGTTGCCGGGTGATACAGCGAGTGCTGGAACACTGCAAAGACCCTACAACACAACAGAAAGTTATGGATGAAATTTTAGGAGCAGTTAGCATGTTAGCTCAGGATCAGTATGGCAACTACGTTGTTCAGCATGTGCTGGAACATGGGAAGCCTCATGAGCGTTCTTCTATAATAAAGGAATTAGCAGACAAGATAGTGCAAATGAGTCAACAGAAGTTTGCCTCCAATGTTGTGGAGAAATGTTTGACCTTTGGAGGTCCTTCTGAACGCCAATTACTAGTGAGTCAGATGCTTGGCACCACAGATGAAAACGAACCTCTTCAGGCGATGATGAAAGATCAATTTGCAAATTACGTTGTACAAAAGGTGCTGGAAACTTGTGATGATCAACAGCGCGAGCTGATTCTTTCCCGAATTAAGGTTCATTTGAATGCATTGAAAAAGTACACCTATGGAAAGCACATTGTCTCTCGTGTAGAAAAACTTGTTGCAGCTGGAGAAAGGAGAATTGCTGCTCAGGCTCCTCCTCAACCCGCTTAG

>Glyma.12g060600.5 sequence-type=CDS polypeptide=Glyma.12g060600.5.p locus=Glyma.12g060600 id=Glyma.12g060600.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTGTCTGAATTGGGAAGAAGACCTATGCTTGGAAGTAACGAGGGTTCTTTTGGTGATGAATTGGAGAAAGAGATAGGGATGTTACTTCGTGAGCAACGCAGACAAGAGGCTGATGATCGTGAGCGAGAGCTTAATATTTTTAGGAGTGGATCGGCACCTCCAACTGTGGAGGGTTCTTTGAGTGCCGTTGGAGGGTTGTTTGCTGCTGGTGGTGGTGGTGGTCCTGCTACTGGTGCTCCTGCTGCCTTTTTGGAGTTTCGAGGAGCGAAGGATGTGAATGGGATTGCTTCTGAGGAAGAGCTTAGGTCTGATCCAGCGTATCTTTCATACTACTACTCCAATGTGAATTTGAATCCTAGGCTGCCACCTCCTTTGCTGTCAAAGGAGGATTGGAGATTTCAACAAAGACTTAAAGGTGGAGCTTCTGCTCTAGGTGGAATTGGAGATAGGAGGAAAGTGAACAGGACTGATGATAATGCTGGAAGATTGCTTTTTGCTACCCCACCAGGTTTTAACATGAGGAAACTAGAGAGTGAGGTGGATAATGAAAAAACAAGAGGTTCGGCCGAGTGGGGTGGTGATGGACTGATTGGTTTGCCTGGACTAGGGCTGAGCAAACAGAAGAGCTTTGCAGAATTTTTTCAGGATGATTTGGGGCATAATACCTCTATCACACGCCTTCCTTCTCGCCCAGCCAGTCGTAATGCATTTGATGAAAATGATATCATTAGTTCTGCTGAACCAGAGTTGGCTCATGTACGTCGTGAGTCCACTCCCACTGATGCACTAAGGTCAGGATCAAATGTTCAAGGATCATCTGCAGCCCAAAATGTTGGCTTACCAGCTTCATATTCTTATGCTGCTGCAGTAGGATCTTCCTTGTCAAGAAGCACTACTCCTGATCCACAACTTATTGCTAGGGCTCCCAGTCCCTGCATCACTCCCATTGGTGGCGGCAGAGCCATTGCTTCTGACAAGAGAGCTATTGCCAATCCAGATGCATTTAATGGTGTTTCATCTGGCATCAATGAGTCAGCAGATCTTGTGGCTGCATTATCAGTGATGAACTTGTCAGCAGATGATGTGTTAGATGGTGAAAACCATTTCCCATCACAAGTTGAATCAGATGTAGATAGTCATCAGAGATATCTTTTTGGTAGGCAAGGTGGTCAGGATCATGGGAAGCAACAGGCTTATTTAAAGAAATCTGAATCAGCACACTTGCAAAATTCAAGTAAGAGCAGCAGGAGTGGATCAGGTCTCAACAATCCATCCTTGGATAGGCAGGTTGAGCTACAAAAGTCTACTGTTCCTTCCAATAACTCATACTTCAAAGGATCGCCTACCTCCCATTTTAGTGGAGGAGGAAGTATGCCACCTCAGTACCAGCCTTTAGATGGTACAAATTCATCATTTACTAACTATGGTATGAGTGGCTATGCTGGAAATCCAGCATTGGCATCCTTGATGACTAACCAACTAGGCACTGGTAATCTGCCACCCTTGTTTCAAAATGTTGCTGCGGCATCAGCAATGGCTGCCCCTGGAATGGACTCGAGAATTCTTGGATGTGGTTTGGCTTCTGGAACTGCTGCTCCATCTGATGTGCATAATCTTGGTAGGATGGGAAATCAAATTCAAGGCAGTGCTCTTCAGGCTCCTTTTGTCGATCCCATGTATCTTCAGTACCTGAGGACGTCTGAGTTTGCTGCAGCACAACTTGCTGCTCTCAATGACCCCTCTGTGGACAGGAACTACTTGGGCAATTCATACATGAATTTGCTTGAGCTCCAGAAAGCTTATCTTGGGTCTGTCCTCTCACCTCAGAAATCCCAATACAATGTACCGCCGGGTGGTAAATCAGGCAGCTTCACTCCTCATGGTTATTATGGAAATCCTGCATATGGTGCTGGGTTGTCTTACCCAGGAAGTCCTATGGCAAACTCTGTTGTGTCCACTTCTCCAGTTGGATCTGGAAGTCCTGTTAGGCACAATGAACTGAATATGCATTTTGCTTCTGGAATGAGGAATTTAGCTGGGGTCATGGGACCTTGGCATGTAGATAATGAGAACATTGATGAAAGTTTTGCTTCTTCTCTGTTGGAAGAGTTTAAAAGCAATAAAACGAAGTGTTTTGAGCTGTCTGAAATTGCTGGTCATGTTGTTGAATTCAGTGCGGATCAATACGGGAGTCGATTTATTCAACAAAAGCTTGAAACAGCTACTACAGAAGAAAAAAACATGGTTTATCAGGAAATCATGCCACATGCCCTTGCTTTGATGACTGATGTCTTTGGTAATTATGTGGTTCAAAAGTTTTTTGAGCATGGACTTGCATCCCAGAGAAGAGAATTAGCCAACAAACTTCTTGGCCATGTTCTGACACTTAGCCTTCAAATGTATGGTTGCCGTGTCATCCAGAAGGCCATCGAAGTTGTTGATCTGGATCAGAAGATAGAGATGGTTCAAGAGCTTGATGGTAATGTTATGCGCTGTGTACGTGATCAGAATGGTAATCATGTCATTCAGAAGTGTATTGAATGTGTCCCTGAAGATGCAATCCACTTTATTGTGTCAACATTTTTTGATCAAGTTGTGACACTCTCAACCCATCCATATGGTTGCCGGGTGATACAGCGAGTGCTGGAACACTGCAAAGACCCTACAACACAACAGAAAGTTATGGATGAAATTTTAGGAGCAGTTAGCATGTTAGCTCAGGATCAGTATGGCAACTACGTTGTTCAGGTTTATAATTTTTTCTGA
Predicted protein sequences of Glyma.12g060600
>Glyma.12g060600.3.p sequence-type=predicted peptide transcript=Glyma.12g060600.3 locus=Glyma.12g060600 id=Glyma.12g060600.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVEGSLSAVGGLFAAGGGGGPATGAPAAFLEFRGAKDVNGIASEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFQQRLKGGASALGGIGDRRKVNRTDDNAGRLLFATPPGFNMRKLESEVDNEKTRGSAEWGGDGLIGLPGLGLSKQKSFAEFFQDDLGHNTSITRLPSRPASRNAFDENDIISSAEPELAHVRRESTPTDALRSGSNVQGSSAAQNVGLPASYSYAAAVGSSLSRSTTPDPQLIARAPSPCITPIGGGRAIASDKRAIANPDAFNGVSSGINESADLVAALSVMNLSADDVLDGENHFPSQVESDVDSHQRYLFGRQGGQDHGKQQAYLKKSESAHLQNSSKSSRSGSGLNNPSLDRQVELQKSTVPSNNSYFKGSPTSHFSGGGSMPPQYQPLDGTNSSFTNYGMSGYAGNPALASLMTNQLGTGNLPPLFQNVAAASAMAAPGMDSRILGCGLASGTAAPSDVHNLGRMGNQIQGSALQAPFVDPMYLQYLRTSEFAAAQLAALNDPSVDRNYLGNSYMNLLELQKAYLGSVLSPQKSQYNVPPGGKSGSFTPHGYYGNPAYGAGLSYPGSPMANSVVSTSPVGSGSPVRHNELNMHFASGMRNLAGVMGPWHVDNENIDESFASSLLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRELANKLLGHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMVQELDGNVMRCVRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELADKIVQMSQQKFASNVVEKCLTFGGPSERQLLVSQMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVSRVEKLVAAGERRIAAQAPPQPA*

>Glyma.12g060600.5.p sequence-type=predicted peptide transcript=Glyma.12g060600.5 locus=Glyma.12g060600 id=Glyma.12g060600.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVEGSLSAVGGLFAAGGGGGPATGAPAAFLEFRGAKDVNGIASEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFQQRLKGGASALGGIGDRRKVNRTDDNAGRLLFATPPGFNMRKLESEVDNEKTRGSAEWGGDGLIGLPGLGLSKQKSFAEFFQDDLGHNTSITRLPSRPASRNAFDENDIISSAEPELAHVRRESTPTDALRSGSNVQGSSAAQNVGLPASYSYAAAVGSSLSRSTTPDPQLIARAPSPCITPIGGGRAIASDKRAIANPDAFNGVSSGINESADLVAALSVMNLSADDVLDGENHFPSQVESDVDSHQRYLFGRQGGQDHGKQQAYLKKSESAHLQNSSKSSRSGSGLNNPSLDRQVELQKSTVPSNNSYFKGSPTSHFSGGGSMPPQYQPLDGTNSSFTNYGMSGYAGNPALASLMTNQLGTGNLPPLFQNVAAASAMAAPGMDSRILGCGLASGTAAPSDVHNLGRMGNQIQGSALQAPFVDPMYLQYLRTSEFAAAQLAALNDPSVDRNYLGNSYMNLLELQKAYLGSVLSPQKSQYNVPPGGKSGSFTPHGYYGNPAYGAGLSYPGSPMANSVVSTSPVGSGSPVRHNELNMHFASGMRNLAGVMGPWHVDNENIDESFASSLLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRELANKLLGHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMVQELDGNVMRCVRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQKVMDEILGAVSMLAQDQYGNYVVQVYNFF*






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