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Report for Sequence Feature Glyma.12g060400

Feature Type:gene_model
Chromosome:Gm12
Start:4343600
stop:4350847
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g060400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G29190.2AT APUM2,PUM2 JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
K17943KEGG Spinocerebellar ataxia JGI N/AIEA
PTHR12537PantherFam RNA BINDING PROTEIN PUMILIO-RELATED JGI N/AIEA
PF00806Pfam Pumilio-family RNA binding repeat JGI N/AIEA
PF07990Pfam Nucleic acid binding protein NABP JGI N/AIEA

Gene model name correspondences to Glyma.12g060400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g06430 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g060400
>Glyma.12g060400.1 sequence-type=CDS polypeptide=Glyma.12g060400.1.p locus=Glyma.12g060400 id=Glyma.12g060400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTGTCTGAATTGGGAAGAAGACCTATGCTTGGGAGTAACGAGGGTTCTTTTGGTGATGAATTGGAGAAGGAGATAGGGATGTTACTTCGTGAGCAACGCAGACAAGAGGCTGATGATCGTGAGCGAGAGCTTAATATTTTTAGGAGTGGATCGGCGCCTCCAACTGTGGACGGTTCTTTGAGTGCCGTAGGAGGGTTGTTTGCTGGTGGTGGTGGTGGTGGTGCTCCTGCTGCCTTTTCAGAGTTTCGAGGAACGAAGGATGTGAATGGGATTGCTTCTGAGGAAGAGCTTAGGTCTGATCCAGCGTATCTTTCATACTACTACTCCAATGTGAATTTGAATCCTAGGCTGCCACCTCCTTTGCTGTCAAAGGAGGATTGGAGATTTCAACAAAGACTTAAAGGTGGAGCTTCTGCTCTAGGTGGAATTGGAGATAGGAGGAAAGTAAACAGGACTGATGATAATGCTGGAAGATCGCTTTTTGCTACCCCACCAGGTTTTAACATGAGGAAACAAGAGAGTGAGGTGGATAATGAAAAAACAAGAGGTTCGGCCGAGTGGGGTGGTGATGGACTGATTGGTTTGCCTGGACTAGGGCTGAGCAAACAGAAGAGCTTTGCAGAAATTTTTCAGGATGATTTGGGGCATAATACCTCTATCGGATGCCTTCCTTCCCGTCCAGCCAGTCGTAATACATTTGATGACACTGATATCATTAGTTCTGCTGAAGCAGAGTTGGCTCATGTTCAAGGATCATCTGCAGCCCAAAATGTTGGCTTACCAGCTTCATATTCTTATGCTGTTGCAGTAGGATCTTCCTTGTCAAGAAGCACTACTCCTGATCCACAACTTGTTGCTAGGGCTCCCAGTCCCTGCATCACGCCTATTGGTGGCGGCAGAGCCATTGCTTCTGACAAGAGAGCTATTGCCAATCCAGATGCATTTAATGGTGTTTCATCTGGCATCAATGAGTCAGCAGATCTTGTGGCTGCATTGTCAGTGATGAACTTGTCAGCAGATTATGTGTTAGATGGTGCAAACCATTTGCCATCACAGGTTGAATCAGATGTAGATAGTCATAAGAGATATCTTTTTGGTAGGCTAGGTGGTCAAGATCATGGGAAGCAACAGGCTTATTTAAAGAAATCTGAATCAGCACACTTGCAAAATTCAAGTAAGAGCAGCAGGAGTGGGTCAGGTCTCAACAATCCATCCTTGGATAGGCAGGTTGAGCTACAAAAGTCTACCGTTCCTTCCAATAACTCATATTTCAAAGGATCGCCTACCTCCCATTTTAGTAGAGGAGGAAGTATGCCACTTCAGTACCAGCCTTTAGATGGTACAAATTCATCATTTACTAACTACGGTATGAGTGGCTATGCTGGAAATCCAGCACTGGCATCCTTGATGACTAACCAACTTGGCACTGGTAATCTGCCACCCTTGTTTGAAAATGTTGCTGCAGCATCAGCAATGGCAGCCCCTCGAATGGACTCGAGAATTCTTGGAGGTGGTTTGGCTTCTGGAGCTGCTGCTCCATCTGATGTGCATAATCTTGGTAGGATGGGAAATCAAATTCAAGGCAGTGCTCTTCAGGCTCCTTTTGTTGATCCCATGTATCTTCAGTACCTGAGGACACCTGAGTTTGCTGCAGCACAACTTGCTGCTCTCAATGACCCCTCTGTGGACAGGAACTACTTGGGCAATTCATACATGAATTTGCTTGAGCTCCAGAAAGCTTATCTTGGGTCTGTCCTCTCACCTCAGAAATCCCAATACAATGTACCGCCGGGTGGTAAATCAGGCAGCTTCACTCCTCATGGTTATTATGGAAATCCTGCATATGGTGCTGGGTTGTCTTACCCAGGAAGTCCTATGGCAAACTCTGTTGTGTCCACTTCTCCAGTTGGATCTGGAAGTCCTGTTAGGCACAATGAACTGAATATGCATTTTGCTTCTGGAATGAGGAATTTAGCTGGGGTCATGGGACCTTGGCATGTAGATAATGAGAACATTGATGAAAGTTTTGCTTCTTCTCTGTTGGAAGAGTTTAAAAGCAATAAAACGAAGTGTTTTGAGCTGTCTGAAATTGCTGGTCATGTTGTTGAATTCAGTGCGGATCAATATGGGAGTCGATTTATTCAACAAAAGCTAGAAACAGCTACTACAGAAGAAAAAAACATGGTTTATCAGGAAATCATGCCACATGCCCTTGCTTTGATGACTGATGTCTTTGGTAATTATGTGGTTCAAAAGTTTTTTGAGCATGGACTTGCATCCCAGAAAAGAGAATTAGCCAACAAACTTCTTGGCCATGTTCTGGCACTTAGCCTTCAAATGTATGGTTGCCGTGTCATCCAGAAGGCCATTGAAGTTGTTGATCTGGATCAGAAGATAGAGATGGTTCAAGAGCTTGATGGTAATGTTATGCGCTGTGTACGTGATCAGAATGGTAATCATGTCATTCAGAAGTGTATTGAATGTGTTCCTGAAGATGCAATCCACTTTATTGTGTCAACATTTTTTGATCAAGTTGTGACACTCTCAACCCATCCATATGGTTGCCGGGTGATACAGAGAGTGCTGGAACACTGCAAAGACCCTACGACACAACAGAAAGTTATGGATGAAATATTAGGAGCAGTTAGCATGTTAGCTCAGGATCAGTATGGCAACTACGTTGTTCAGCATGTGCTGGAACATGGGAAGCCTCATGAACGTTCTTCTATCATAAAGGAATTAGCAGGCAAGATAGTTCAAATGAGTCAACAGAAGTTTGCCTCCAATGTTGTGGAGAAATGTTTGACCTTTGGTGGTCCTTCTGAGCGCCAATTACTAGTGTGTGAGATGCTTGGCACCACAGATGAAAATGAGCCTCTTCAGGCGATGATGAAAGATCAATTTGCAAATTACGTTGTACAAAAGGTGCTGGAAACTTGTGATGATCAACAACGCGAGCTGATTCTTTACCGAATTAAGGTTCATTTGAATGCATTGAAAAAGTACACCTATGGAAAGCACATTGTCGCCCGTGTGGAGAAACTTGTTGCTGCTGGAGAAAGGAGAATTGCTGCTCAGGCTCCTCCTCAACCTGCTTAG

>Glyma.12g060400.2 sequence-type=CDS polypeptide=Glyma.12g060400.2.p locus=Glyma.12g060400 id=Glyma.12g060400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTGTCTGAATTGGGAAGAAGACCTATGCTTGGGAGTAACGAGGGTTCTTTTGGTGATGAATTGGAGAAGGAGATAGGGATGTTACTTCGTGAGCAACGCAGACAAGAGGCTGATGATCGTGAGCGAGAGCTTAATATTTTTAGGAGTGGATCGGCGCCTCCAACTGTGGACGGTTCTTTGAGTGCCGTAGGAGGGTTGTTTGCTGGTGGTGGTGGTGGTGGTGCTCCTGCTGCCTTTTCAGAGTTTCGAGGAACGAAGGATGTGAATGGGATTGCTTCTGAGGAAGAGCTTAGGTCTGATCCAGCGTATCTTTCATACTACTACTCCAATGTGAATTTGAATCCTAGGCTGCCACCTCCTTTGCTGTCAAAGGAGGATTGGAGATTTCAACAAAGACTTAAAGGTGGAGCTTCTGCTCTAGGTGGAATTGGAGATAGGAGGAAAGTAAACAGGACTGATGATAATGCTGGAAGATCGCTTTTTGCTACCCCACCAGGTTTTAACATGAGGAAACAAGAGAGTGAGGTGGATAATGAAAAAACAAGAGGTTCGGCCGAGTGGGGTGGTGATGGACTGATTGGTTTGCCTGGACTAGGGCTGAGCAAACAGAAGAGCTTTGCAGAAATTTTTCAGGATGATTTGGGGCATAATACCTCTATCGGATGCCTTCCTTCCCGTCCAGCCAGTCGTAATACATTTGATGACACTGATATCATTAGTTCTGCTGAAGCAGAGTTGGCTCATGTTCAAGGATCATCTGCAGCCCAAAATGTTGGCTTACCAGCTTCATATTCTTATGCTGTTGCAGTAGGATCTTCCTTGTCAAGAAGCACTACTCCTGATCCACAACTTGTTGCTAGGGCTCCCAGTCCCTGCATCACGCCTATTGGTGGCGGCAGAGCCATTGCTTCTGACAAGAGAGCTATTGCCAATCCAGATGCATTTAATGGTGTTTCATCTGGCATCAATGAGTCAGCAGATCTTGTGGCTGCATTGTCAGTGATGAACTTGTCAGCAGATTATGTGTTAGATGGTGCAAACCATTTGCCATCACAGGTTGAATCAGATGTAGATAGTCATAAGAGATATCTTTTTGGTAGGCTAGGTGGTCAAGATCATGGGAAGCAACAGGCTTATTTAAAGAAATCTGAATCAGCACACTTGCAAAATTCAAGTAAGAGCAGCAGGAGTGGGTCAGGTCTCAACAATCCATCCTTGGATAGGCAGGTTGAGCTACAAAAGTCTACCGTTCCTTCCAATAACTCATATTTCAAAGGATCGCCTACCTCCCATTTTAGTAGAGGAGGAAGTATGCCACTTCAGTACCAGCCTTTAGATGGTACAAATTCATCATTTACTAACTACGGTATGAGTGGCTATGCTGGAAATCCAGCACTGGCATCCTTGATGACTAACCAACTTGGCACTGGTAATCTGCCACCCTTGTTTGAAAATGTTGCTGCAGCATCAGCAATGGCAGCCCCTCGAATGGACTCGAGAATTCTTGGAGGTGGTTTGGCTTCTGGAGCTGCTGCTCCATCTGATGTGCATAATCTTGGTAGGATGGGAAATCAAATTCAAGGCAGTGCTCTTCAGGCTCCTTTTGTTGATCCCATGTATCTTCAGTACCTGAGGACACCTGAGTTTGCTGCAGCACAACTTGCTGCTCTCAATGACCCCTCTGTGGACAGGAACTACTTGGGCAATTCATACATGAATTTGCTTGAGCTCCAGAAAGCTTATCTTGGGTCTGTCCTCTCACCTCAGAAATCCCAATACAATGTACCGCCGGGTGGTAAATCAGGCAGCTTCACTCCTCATGGTTATTATGGAAATCCTGCATATGGTGCTGGGTTGTCTTACCCAGGAAGTCCTATGGCAAACTCTGTTGTGTCCACTTCTCCAGTTGGATCTGGAAGTCCTGTTAGGCACAATGAACTGAATATGCATTTTGCTTCTGGAATGAGGAATTTAGCTGGGGTCATGGGACCTTGGCATGTAGATAATGAGAACATTGATGAAAGTTTTGCTTCTTCTCTGTTGGAAGAGTTTAAAAGCAATAAAACGAAGTGTTTTGAGCTGTCTGAAATTGCTGGTCATGTTGTTGAATTCAGTGCGGATCAATATGGGAGTCGATTTATTCAACAAAAGCTAGAAACAGCTACTACAGAAGAAAAAAACATGGTTTATCAGGAAATCATGCCACATGCCCTTGCTTTGATGACTGATGTCTTTGGTAATTATGTGGTTCAAAAGTTTTTTGAGCATGGACTTGCATCCCAGAAAAGAGAATTAGCCAACAAACTTCTTGGCCATGTTCTGGCACTTAGCCTTCAAATGTATGGTTGCCGTGTCATCCAGAAGGCCATTGAAGTTGTTGATCTGGATCAGAAGATAGAGATGGTTCAAGAGCTTGATGGTAATGTTATGCGCTGTGTACGTGATCAGAATGGTAATCATGTCATTCAGAAGTGTATTGAATGTGTTCCTGAAGATGCAATCCACTTTATTGTGTCAACATTTTTTGATCAAGTTGTGACACTCTCAACCCATCCATATGGTTGCCGGGTGATACAGGTAAGTTCTCTTCACTGCTTATATTACTTTTATAATGTACCTGAGATCGTTTGTCATATAAGAATACCTTCTACACGACAGAGAGTGCTGGAACACTGCAAAGACCCTACGACACAACAGAAAGTTATGGATGAAATATTAGGAGCAGTTAGCATGTTAGCTCAGGATCAGTATGGCAACTACGTTGTTCAGCATGTGCTGGAACATGGGAAGCCTCATGAACGTTCTTCTATCATAAAGGAATTAGCAGGCAAGATAGTTCAAATGAGTCAACAGAAGTTTGCCTCCAATGTTGTGGAGAAATGTTTGACCTTTGGTGGTCCTTCTGAGCGCCAATTACTAGTGTGTGAGATGCTTGGCACCACAGATGAAAATGAGCCTCTTCAGGCGATGATGAAAGATCAATTTGCAAATTACGTTGTACAAAAGGTGCTGGAAACTTGTGATGATCAACAACGCGAGCTGATTCTTTACCGAATTAAGGTTCATTTGAATGCATTGAAAAAGTACACCTATGGAAAGCACATTGTCGCCCGTGTGGAGAAACTTGTTGCTGCTGGAGAAAGGAGAATTGCTGCTCAGGCTCCTCCTCAACCTGCTTAG
Predicted protein sequences of Glyma.12g060400
>Glyma.12g060400.1.p sequence-type=predicted peptide transcript=Glyma.12g060400.1 locus=Glyma.12g060400 id=Glyma.12g060400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVDGSLSAVGGLFAGGGGGGAPAAFSEFRGTKDVNGIASEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFQQRLKGGASALGGIGDRRKVNRTDDNAGRSLFATPPGFNMRKQESEVDNEKTRGSAEWGGDGLIGLPGLGLSKQKSFAEIFQDDLGHNTSIGCLPSRPASRNTFDDTDIISSAEAELAHVQGSSAAQNVGLPASYSYAVAVGSSLSRSTTPDPQLVARAPSPCITPIGGGRAIASDKRAIANPDAFNGVSSGINESADLVAALSVMNLSADYVLDGANHLPSQVESDVDSHKRYLFGRLGGQDHGKQQAYLKKSESAHLQNSSKSSRSGSGLNNPSLDRQVELQKSTVPSNNSYFKGSPTSHFSRGGSMPLQYQPLDGTNSSFTNYGMSGYAGNPALASLMTNQLGTGNLPPLFENVAAASAMAAPRMDSRILGGGLASGAAAPSDVHNLGRMGNQIQGSALQAPFVDPMYLQYLRTPEFAAAQLAALNDPSVDRNYLGNSYMNLLELQKAYLGSVLSPQKSQYNVPPGGKSGSFTPHGYYGNPAYGAGLSYPGSPMANSVVSTSPVGSGSPVRHNELNMHFASGMRNLAGVMGPWHVDNENIDESFASSLLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQKRELANKLLGHVLALSLQMYGCRVIQKAIEVVDLDQKIEMVQELDGNVMRCVRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELAGKIVQMSQQKFASNVVEKCLTFGGPSERQLLVCEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILYRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQAPPQPA*

>Glyma.12g060400.2.p sequence-type=predicted peptide transcript=Glyma.12g060400.2 locus=Glyma.12g060400 id=Glyma.12g060400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVDGSLSAVGGLFAGGGGGGAPAAFSEFRGTKDVNGIASEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFQQRLKGGASALGGIGDRRKVNRTDDNAGRSLFATPPGFNMRKQESEVDNEKTRGSAEWGGDGLIGLPGLGLSKQKSFAEIFQDDLGHNTSIGCLPSRPASRNTFDDTDIISSAEAELAHVQGSSAAQNVGLPASYSYAVAVGSSLSRSTTPDPQLVARAPSPCITPIGGGRAIASDKRAIANPDAFNGVSSGINESADLVAALSVMNLSADYVLDGANHLPSQVESDVDSHKRYLFGRLGGQDHGKQQAYLKKSESAHLQNSSKSSRSGSGLNNPSLDRQVELQKSTVPSNNSYFKGSPTSHFSRGGSMPLQYQPLDGTNSSFTNYGMSGYAGNPALASLMTNQLGTGNLPPLFENVAAASAMAAPRMDSRILGGGLASGAAAPSDVHNLGRMGNQIQGSALQAPFVDPMYLQYLRTPEFAAAQLAALNDPSVDRNYLGNSYMNLLELQKAYLGSVLSPQKSQYNVPPGGKSGSFTPHGYYGNPAYGAGLSYPGSPMANSVVSTSPVGSGSPVRHNELNMHFASGMRNLAGVMGPWHVDNENIDESFASSLLEEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQKRELANKLLGHVLALSLQMYGCRVIQKAIEVVDLDQKIEMVQELDGNVMRCVRDQNGNHVIQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQVSSLHCLYYFYNVPEIVCHIRIPSTRQRVLEHCKDPTTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELAGKIVQMSQQKFASNVVEKCLTFGGPSERQLLVCEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILYRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQAPPQPA*






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