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Report for Sequence Feature Glyma.12g059800

Feature Type:gene_model
Chromosome:Gm12
Start:4311613
stop:4316476
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g059800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G07480.1AT JGI N/AIEA
GO:0006367GO-bp transcription initiation from RNA polymerase II promoter JGI N/AIEA
GO:0005672GO-cc transcription factor TFIIA complex JGI N/AIEA
K03122KEGG Transcription machinery JGI N/AIEA
KOG2652 KOG RNA polymerase II transcription initiation factor TFIIA, large chain JGI N/AIEA
PTHR12694PantherFam TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1 JGI N/AIEA
PTHR12694:SF8PantherFam TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1 JGI N/AIEA
PF03153Pfam Transcription factor IIA, alpha/beta subunit JGI N/AIEA

Gene model name correspondences to Glyma.12g059800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g06370 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g059800
>Glyma.12g059800.1 sequence-type=CDS polypeptide=Glyma.12g059800.1.p locus=Glyma.12g059800 id=Glyma.12g059800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGGCCTCCTCCACCAGCCAGGTCTACATCCAGGTAATCGACGATGTCATGATCAAGGTCCGCGACGAGTTCGTCAACAACGGTGGTCCCGGCGATGAAGTTCTCAAGGAGCTTCAATCTATATGGGAATCGAAGATGTTGCAAGCTGGTGCCATTGTCGGCCCCATAGAAAGGTCCGGGGCGCCTAAGCCAACGCCCGGCGGTCCAATTACTCCTGTTCATGATCTTAACATGCCTTATGAGGGGACTGAGGAGTATGAAACTCCCACAGCGGAAATGCTTTTCCCCCCTACGCCATTGCAAACTCCTCTTCAAACCCCTTTACCAGGAACTGTGGATAACTCAATGTATAACATTCCCACTGGACCTAGTGACTACCCGTCTGCTGGAAATGAACCTGGTGAAAATAATGAGATAAAAGGTGGAAGGCCTGGTCCATACATGCAACCTCCTCCCTGGACGAGCCAGAACCAGAACCAGAGGGCTCCACTTGACGTCAATGTTGCTTATGTGGAAGGGCGGGATGCTGCGGAAAGAGGAGCCTCTAATCAACCTCTGACACAGGACTTCTTCATGTCCTCGGGGAAGCGGAAACGTGATGAAATTGCTTCTCAATATAATGCTGGTGGATATATACCTCAGCAAGATGGAGCTGGAGATGCTGATTCTCAAATTTTTGAAATTGAAGTGTATGGAGGGGGCATCTCCATTGATGCAGGTCACTCTACTTCTAATGGAAAAATGCCAGCACATTCAGACAGGCCAGCTTCTCAGATTCCTCAATTTGATGGACCAATTCCTTACGATGATGATGTGGTTTCTACTCCAAATATGTACAATTATGGAGTGTTCAATGAAGACTACAACATTGCAAATACACCAGCTTCTTCTGATGTACCAGCAAGTACCCCTGCTCCTGTTGCTCAAAATGAGGTTGATGAAGAAGATGATGATGATGATGAGCCCCTAAATGAAAATGATGATGATGATGATTTGGATGATTTGGATCAGGGAGAGGATCAAAATACACACCATCTTGTTTTGGCCCAGTTTGACAAGGTGACGCGTACCAAGAGTAGATGGAAGTGCACCCTAAAGGATGGTATCATGCATATAAATAATAAGGACATTCTCTTCAATAAGGCAACTGGAGAATTTGAATTCTGA

>Glyma.12g059800.2 sequence-type=CDS polypeptide=Glyma.12g059800.2.p locus=Glyma.12g059800 id=Glyma.12g059800.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGGCCTCCTCCACCAGCCAGGTCTACATCCAGGTAATCGACGATGTCATGATCAAGGTCCGCGACGAGTTCGTCAACAACGGTGGTCCCGGCGATGAAGTTCTCAAGGAGCTTCAATCTATATGGGAATCGAAGATGTTGCAAGCTGGTGCCATTGTCGGCCCCATAGAAAGGTCCGGGGCGCCTAAGCCAACGCCCGGCGGTCCAATTACTCCTGTTCATGATCTTAACATGCCTTATGAGGGGACTGAGGAGTATGAAACTCCCACAGCGGAAATGCTTTTCCCCCCTACGCCATTGCAAACTCCTCTTCAAACCCCTTTACCAGGAACTGTGGATAACTCAATGTATAACATTCCCACTGGACCTAGTGACTACCCGTCTGCTGGAAATGAACCTGGTGAAAATAATGAGATAAAAGGTGGAAGGCCTGGTCCATACATGCAACCTCCTCCCTGGACGAGCCAGAACCAGAACCAGAGGGCTCCACTTGACGTCAATGTTGGGCGGGATGCTGCGGAAAGAGGAGCCTCTAATCAACCTCTGACACAGGACTTCTTCATGTCCTCGGGGAAGCGGAAACGTGATGAAATTGCTTCTCAATATAATGCTGGTGGATATATACCTCAGCAAGATGGAGCTGGAGATGCTGATTCTCAAATTTTTGAAATTGAAGTGTATGGAGGGGGCATCTCCATTGATGCAGGTCACTCTACTTCTAATGGAAAAATGCCAGCACATTCAGACAGGCCAGCTTCTCAGATTCCTCAATTTGATGGACCAATTCCTTACGATGATGATGTGGTTTCTACTCCAAATATGTACAATTATGGAGTGTTCAATGAAGACTACAACATTGCAAATACACCAGCTTCTTCTGATGTACCAGCAAGTACCCCTGCTCCTGTTGCTCAAAATGAGGTTGATGAAGAAGATGATGATGATGATGAGCCCCTAAATGAAAATGATGATGATGATGATTTGGATGATTTGGATCAGGGAGAGGATCAAAATACACACCATCTTGTTTTGGCCCAGTTTGACAAGGTGACGCGTACCAAGAGTAGATGGAAGTGCACCCTAAAGGATGGTATCATGCATATAAATAATAAGGACATTCTCTTCAATAAGGCAACTGGAGAATTTGAATTCTGA
Predicted protein sequences of Glyma.12g059800
>Glyma.12g059800.1.p sequence-type=predicted peptide transcript=Glyma.12g059800.1 locus=Glyma.12g059800 id=Glyma.12g059800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAASSTSQVYIQVIDDVMIKVRDEFVNNGGPGDEVLKELQSIWESKMLQAGAIVGPIERSGAPKPTPGGPITPVHDLNMPYEGTEEYETPTAEMLFPPTPLQTPLQTPLPGTVDNSMYNIPTGPSDYPSAGNEPGENNEIKGGRPGPYMQPPPWTSQNQNQRAPLDVNVAYVEGRDAAERGASNQPLTQDFFMSSGKRKRDEIASQYNAGGYIPQQDGAGDADSQIFEIEVYGGGISIDAGHSTSNGKMPAHSDRPASQIPQFDGPIPYDDDVVSTPNMYNYGVFNEDYNIANTPASSDVPASTPAPVAQNEVDEEDDDDDEPLNENDDDDDLDDLDQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFEF*

>Glyma.12g059800.2.p sequence-type=predicted peptide transcript=Glyma.12g059800.2 locus=Glyma.12g059800 id=Glyma.12g059800.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAASSTSQVYIQVIDDVMIKVRDEFVNNGGPGDEVLKELQSIWESKMLQAGAIVGPIERSGAPKPTPGGPITPVHDLNMPYEGTEEYETPTAEMLFPPTPLQTPLQTPLPGTVDNSMYNIPTGPSDYPSAGNEPGENNEIKGGRPGPYMQPPPWTSQNQNQRAPLDVNVGRDAAERGASNQPLTQDFFMSSGKRKRDEIASQYNAGGYIPQQDGAGDADSQIFEIEVYGGGISIDAGHSTSNGKMPAHSDRPASQIPQFDGPIPYDDDVVSTPNMYNYGVFNEDYNIANTPASSDVPASTPAPVAQNEVDEEDDDDDEPLNENDDDDDLDDLDQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFEF*






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