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Report for Sequence Feature Glyma.12g059400

Feature Type:gene_model
Chromosome:Gm12
Start:4293922
stop:4295662
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.12g059400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G29260.1AT NAD(P)-binding Rossmann-fold superfamily protein JGI N/AIEA
PTHR24310Panther FAMILY NOT NAMED JGI N/AIEA
PTHR24310:SF66Panther JGI N/AIEA
GN7V-43565SoyCyc9-rxn tropinone reductase II Plant Metabolic Network ISS

Expression Patterns of Glyma.12g059400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.12g059400 not represented in the dataset
Glyma.12g059400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.12g059400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g06331 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g059400
>Glyma.12g059400.1 sequence-type=CDS polypeptide=Glyma.12g059400.1.p locus=Glyma.12g059400 ID=Glyma.12g059400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTGATGGGTTTATGGAATTTTGGACATTTGTTTGTTTTCTGGTTTATTGGGGCAATTAATCAACTTACAAGAAATCTAGCTTGTGAGTGGGAAAAAGACTATATAAGGAGTAATGCAGTGGCACCTTGGTACATCAAAACTTCATTGGTAGAGCAGGTGCTCAGCAACAAAGACTATCTGGAAGAAGTGTACTCCAGAACCCCACTAAGGCGCCTAGGAGATCCAGCAGAAGTCTCTTCTCTTGTTGCCTTTCTCTGCTTACCAGCATCATCATACATCACTGGCCAGATTATTTGTATTGATGGAGGAGTGTCTGTGAATGGTTTCCACCCAACAACATAG
Predicted protein sequences of Glyma.12g059400
>Glyma.12g059400.1.p sequence-type=predicted peptide transcript=Glyma.12g059400.1 locus=Glyma.12g059400 ID=Glyma.12g059400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLMGLWNFGHLFVFWFIGAINQLTRNLACEWEKDYIRSNAVAPWYIKTSLVEQVLSNKDYLEEVYSRTPLRRLGDPAEVSSLVAFLCLPASSYITGQIICIDGGVSVNGFHPTT*






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