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Report for Sequence Feature Glyma.12g055000

Feature Type:gene_model
Chromosome:Gm12
Start:3970070
stop:3974579
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g055000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G20810.1AT JGI N/AIEA
1.14.11.27EC [histone H3]-dimethyl-L-lysine36 demethylase JGI N/AIEA
K10277KEGG Ribosome biogenesis JGI N/AIEA
KOG2132 KOG Uncharacterized conserved protein, contains JmjC domain JGI N/AIEA
PTHR12461PantherFam HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED JGI N/AIEA
PTHR12461:SF38PantherFam BIFUNCTIONAL PEPTIDASE AND ARGINYL-HYDROXYLASE JMJD5 JGI N/AIEA
PF08007Pfam Cupin superfamily protein JGI N/AIEA

Gene model name correspondences to Glyma.12g055000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g05890 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g055000
>Glyma.12g055000.1 sequence-type=CDS polypeptide=Glyma.12g055000.1.p locus=Glyma.12g055000 id=Glyma.12g055000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGACCACAACTGTATCCGGCGGCGACCCTCCTTCTCGCGGTTTTGATACGCCGACGCTGGACCGGGAGGCGGCGGCGCTGCTCCACGCGATCTCCGAGCATGGCGGGTACGCGTACGTGAGCATGGCGGTGCTGGCTTCCGGCGGCGACATTCGCGCGGCGGAGGCGGCTCGGGAGATGGCGTGGGAGCAGCTGCACTCGGGTCCGTGGCACTCGGTGCTGCCGGTGTGGCGCGACGCCTACTCCATGGCGTGCCTCCACGTGGCGCGCCACCACTACGGCAACGGTGAGTTCTTGGACGCACTTAGGGTTTTGGATTTGGGAATCATCATGGGAGGCACGCTCCTCCGCAAGGATTTGGACTCCGCCATCGAGAAAGTGTCGGAACAAACACGGAGGAGCGTTAGGGTTTCTGATTTGGGGAACTCCGAACACCGACTCGTCGATCGCGAATTTGATATGGCAGAGGTGCTCCAACTTTTACCTGTGAAGTCTCTTTCTACGAAACTTGTGGTGAAGAAATCGGCGCTGTCCTTGGAGAAATTCCTGAAGGATCATTACCTGTCTGGCTGCCCGGTTATTATCAGTGATTGTATGTCTCACTGGCCAGCCAAGATGAAATGGAATGACGAAGATTACTTGCTGAGAGTTGCCGGAGACCGTACAGTTCCAGTTGAGGTTGGGAAAAACTATTTATGTACTGAGTGGAAGCAAGAGCTAATTACTTTTTCAGAGTTTCTTCAGCGGATAAAGTCTGATAGCTGTTCTCCTGGTGGTCCTACATATCTTGCTCAGCATCCATTATTTGATCAGATAAATGAGCTTCGGAAAGATATCTTTATTCCTGACTATTGTTTTACTGGTGGAGGGGAGCTACGATCTCTCAATGCTTGGTTTGGTCCAGCAGGAACAGTAACACCGTTACACCATGATCCACATCATAACATACTAGCTCAGGTTGTTGGAAAGAAATACATTAGGCTATACTCTTCGTCTTTATCTGAGGAACTTTCCCCCCACTCTGGTACCATGCTCCACAACTCCAGCCAGGTTGATTTAGATGATATGGATGAAAAGAAGTTTCCGAAGGTGCAAGACTTGGAATTTGTAGACTGTATTTTAGAGGAAGGCGAAATGTTATATATCCCGCCAAAATGGTGGCACTATGTGCGGTCTTTGACTACCAGTTTTTCGGTTAGCTTTTGGTGGAGTGAGGGTGAAAGTTCGGATGCATCCTAA
Predicted protein sequences of Glyma.12g055000
>Glyma.12g055000.1.p sequence-type=predicted peptide transcript=Glyma.12g055000.1 locus=Glyma.12g055000 id=Glyma.12g055000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSTTTVSGGDPPSRGFDTPTLDREAAALLHAISEHGGYAYVSMAVLASGGDIRAAEAAREMAWEQLHSGPWHSVLPVWRDAYSMACLHVARHHYGNGEFLDALRVLDLGIIMGGTLLRKDLDSAIEKVSEQTRRSVRVSDLGNSEHRLVDREFDMAEVLQLLPVKSLSTKLVVKKSALSLEKFLKDHYLSGCPVIISDCMSHWPAKMKWNDEDYLLRVAGDRTVPVEVGKNYLCTEWKQELITFSEFLQRIKSDSCSPGGPTYLAQHPLFDQINELRKDIFIPDYCFTGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYSSSLSEELSPHSGTMLHNSSQVDLDDMDEKKFPKVQDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSFSVSFWWSEGESSDAS*






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