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Report for Sequence Feature Glyma.12g046000

Feature Type:gene_model
Chromosome:Gm12
Start:3328532
stop:3332012
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g046000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G34350.1AT CLB6,HDR,ISPH JGI N/AIEA
1.17.1.2EC JGI N/AIEA
GO:0019288GO-bp isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway JGI N/AIEA
GO:0050992GO-bp dimethylallyl diphosphate biosynthetic process JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
GO:0051745GO-mf 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity JGI N/AIEA
K03527KEGG Terpenoid backbone biosynthesis JGI N/AIEA
PTHR31619PantherFam 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE, CHLOROPLASTIC JGI N/AIEA
PF02401Pfam LytB protein JGI N/AIEA

Gene model name correspondences to Glyma.12g046000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g05010 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g046000
>Glyma.12g046000.1 sequence-type=CDS polypeptide=Glyma.12g046000.1.p locus=Glyma.12g046000 id=Glyma.12g046000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTATCTCCGATGGCTCTCTCTGCGCATATTTGCCGTTTCCCCGCCACACGCGCTGACACTTCTTTGCCGGAGAGTCTCACCAGAATCCGGTGCCGGAAACCTCTCTCCGTCCGATGCTCCGGCGATTCCACTTCCGGCTCTGTGGGTTCGGAGTTCGATCCGAAGGTGTTTCGGAAGAACCTTACTCGGAGTAAGAATTATAACCGCAAAGGATTTGGGTACAAGGAAGAGACCCTCCAACTCATGAATCGCGAGTACACCAGTGATATCATTAAGACTTTGAAGGAAAATGGGTATGAGTATACATGGGGTACTGTCACGGTGAAGCTTGCTGAAGCCTATGGATTCTGTTGGGGAGTTGAGAGGGCTGTTCAAATTGCTTATGAGGCCAGAAAACAGTTTCCTACTGAGACAATTTGGCTTACCAATGAAATCATCCACAACCCCACTGTCAATAAGCGGCTAGAGGAGATGAATGTTCAAAATATTCCTCTCGAAGAAGGTGGAAAACAATTTGATGTTGTCAACAAGGGTGATGTAGTCATATTGCCAGCTTTTGGAGCGGCAGTGGAAGAGATGTTGACTTTGAGCGAGAAAAATGTTCAGATCGTTGATACAACTTGCCCATGGGTTGCAAAGGTATGGAATTCTGTTGAAAAACACAAGCAACGAGATTATACCTCTGTAATTCATGGTAAATATGCCCATGAGGAAACTGTAGCAACTGCTTCTTTTGCTGGAAAATATATAATTGTGAAGAATATGGCGGAGGCTGAATATGTTTGCGACTATATTCTTGGTGGTGAATTAAATGGATCCAGTTCAACCAAGGAAGCATTTTTAGAGAAATTTAAATTTGCAGTTTCTGAGGGCTTTGATCCAGACAGAGATCTGATTAAAGCTGGCATCGCAAATCAGACAACGATGCTCAAGGGAGAGACAGAAGAGATTGGGAAACTACTGGAGAGGACTATGATGCGCAAATATGGTGTGGAGAACATCAATGAGCACTTCATGAGCTTCAATACAATTTGTGATGCTACTCAGGAGAGACAAGATGCTATGTACAAATTGGTGGAGGAAGATCTGGATCTAATGTTAGTAGTTGGTGGATGGAACTCTAGCAATACATCACACCTGCAAGAGATAGCGGAGGAACGTGGAATTCCTTCTTATTGGATTGACAGTGAGCAAAGAATTGGTCCAGGAAACAAAATAGCATACAAGTTGAACCATGGAGAGCTGGTGGAGAAAGAAAACTGGCTTCCAGAGGGTCCAATAACAATTGGTGTAACATCTGGTGCATCCACACCAGACAAGGTTGTTGAAGATGCACTCATCAGGGTTTTTGACTTGAAACGGGAAGAGGCGATGCAACTTGCATAG
Predicted protein sequences of Glyma.12g046000
>Glyma.12g046000.1.p sequence-type=predicted peptide transcript=Glyma.12g046000.1 locus=Glyma.12g046000 id=Glyma.12g046000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLSPMALSAHICRFPATRADTSLPESLTRIRCRKPLSVRCSGDSTSGSVGSEFDPKVFRKNLTRSKNYNRKGFGYKEETLQLMNREYTSDIIKTLKENGYEYTWGTVTVKLAEAYGFCWGVERAVQIAYEARKQFPTETIWLTNEIIHNPTVNKRLEEMNVQNIPLEEGGKQFDVVNKGDVVILPAFGAAVEEMLTLSEKNVQIVDTTCPWVAKVWNSVEKHKQRDYTSVIHGKYAHEETVATASFAGKYIIVKNMAEAEYVCDYILGGELNGSSSTKEAFLEKFKFAVSEGFDPDRDLIKAGIANQTTMLKGETEEIGKLLERTMMRKYGVENINEHFMSFNTICDATQERQDAMYKLVEEDLDLMLVVGGWNSSNTSHLQEIAEERGIPSYWIDSEQRIGPGNKIAYKLNHGELVEKENWLPEGPITIGVTSGASTPDKVVEDALIRVFDLKREEAMQLA*






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