SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.12g044900

Feature Type:gene_model
Chromosome:Gm12
Start:3251299
stop:3254366
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g044900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G36720.1AT HVA22K JGI N/AIEA
K17279KEGG Exosome JGI N/AIEA
PTHR12300PantherFam HVA22-LIKE PROTEINS JGI N/AIEA
PF03134Pfam TB2/DP1, HVA22 family JGI N/AIEA

Gene model name correspondences to Glyma.12g044900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g04920 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g044900
>Glyma.12g044900.1 sequence-type=CDS polypeptide=Glyma.12g044900.1.p locus=Glyma.12g044900 id=Glyma.12g044900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCACCGGAGGTGCTTGGGTTGAGACTGCTCCTTTCACCCGTTACTTCCGACCTTCTTCTCCGCACAGCATGCTGTTCTATAGGGCTTGCGCTTCCCGTATATTCCACGTTTAAAGCTATTGAGAACAATGACCCATATGAGCAACAAAGGTGCCTATTGTATTGGGCAGCTTATGGATCTTTTAGTGCTGCAGAAATGTTTGCTGAAAAATTACTTTCCTGGATTCCACTCTATTATCACATGAAGTTTGCATTTCTTGTTTGGCTACAGCTTCCCACTCTTGATGGTGCAAGACAACTGTATTCTAGTCACTTGCGTCCATTCCTGTTGAAGCATCAAGCTAGAATGGATCTGATTGTTGAATTTGTGTATGGTGCAATGAGTAAAATTATTAGTGCATACCAACCAGAATTAGAGTTTGCAAGAACTCTTGCAGTGAAATTTTTAATGACAGCCACTCAGATGGTTAGGAATCTCATTCATCCAGTTGGGAGGGAGTCAAATGGCATTGAACCCCAAAAGAGGCAGGTTTCAGAATCAGAAGAAGATTAA

>Glyma.12g044900.3 sequence-type=CDS polypeptide=Glyma.12g044900.3.p locus=Glyma.12g044900 id=Glyma.12g044900.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCACCGGAGCTTGGGTTGAGACTGCTCCTTTCACCCGTTACTTCCGACCTTCTTCTCCGCACAGCATGCTGTTCTATAGGGCTTGCGCTTCCCGTATATTCCACGTTTAAAGCTATTGAGAACAATGACCCATATGAGCAACAAAGGTGCCTATTGTATTGGGCAGCTTATGGATCTTTTAGTGCTGCAGAAATGTTTGCTGAAAAATTACTTTCCTGGATTCCACTCTATTATCACATGAAGTTTGCATTTCTTGTTTGGCTACAGCTTCCCACTCTTGATGGTGCAAGACAACTGTATTCTAGTCACTTGCGTCCATTCCTGTTGAAGCATCAAGCTAGAATGGATCTGATTGTTGAATTTGTGTATGGTGCAATGAGTAAAATTATTAGTGCATACCAACCAGAATTAGAGTTTGCAAGAACTCTTGCAGTGAAATTTTTAATGACAGCCACTCAGATGGTTAGGAATCTCATTCATCCAGTTGGGAGGGAGTCAAATGGCATTGAACCCCAAAAGAGGCAGGTTTCAGAATCAGAAGAAGATTAA
Predicted protein sequences of Glyma.12g044900
>Glyma.12g044900.1.p sequence-type=predicted peptide transcript=Glyma.12g044900.1 locus=Glyma.12g044900 id=Glyma.12g044900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASPEVLGLRLLLSPVTSDLLLRTACCSIGLALPVYSTFKAIENNDPYEQQRCLLYWAAYGSFSAAEMFAEKLLSWIPLYYHMKFAFLVWLQLPTLDGARQLYSSHLRPFLLKHQARMDLIVEFVYGAMSKIISAYQPELEFARTLAVKFLMTATQMVRNLIHPVGRESNGIEPQKRQVSESEED*

>Glyma.12g044900.3.p sequence-type=predicted peptide transcript=Glyma.12g044900.3 locus=Glyma.12g044900 id=Glyma.12g044900.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASPELGLRLLLSPVTSDLLLRTACCSIGLALPVYSTFKAIENNDPYEQQRCLLYWAAYGSFSAAEMFAEKLLSWIPLYYHMKFAFLVWLQLPTLDGARQLYSSHLRPFLLKHQARMDLIVEFVYGAMSKIISAYQPELEFARTLAVKFLMTATQMVRNLIHPVGRESNGIEPQKRQVSESEED*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo