SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.12g040600

Feature Type:gene_model
Chromosome:Gm12
Start:2925874
stop:2927641
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g040600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G75390.1AT AtbZIP44,bZIP44 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
GO:0043565GO-mf sequence-specific DNA binding JGI N/AIEA
PTHR22952PantherFam CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED JGI N/AIEA
PF00170Pfam bZIP transcription factor JGI N/AIEA

Proteins Associated with Glyma.12g040600
LocusGene SymbolProtein Name
BZIP124 bZIP transcription factor bZIP124
bZIP97 Basic leucine zipper transcription factor-like protein gene 97

Gene model name correspondences to Glyma.12g040600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g04440 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g040600
>Glyma.12g040600.1 sequence-type=CDS polypeptide=Glyma.12g040600.1.p locus=Glyma.12g040600 id=Glyma.12g040600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCCTCAAGTGGAACATCTTCAGGGTCATCTCTGCTTCAGAACTCTGGTTCTGAGGAGGATTTGCAGGCGGTGATGGATCAGAGAAAGAGGAAGAGAATGATATCAAACCGCGAATCTGCACGGCGATCTCGCATGAGGAAGCAGAAGCACTTGGACGATCTTGTTTCCCAAGTGGCTCAGCTCAGAAAAGAGAACCAACAAATACTCACAAGCGTCAACATCACCACGCAACAGTACCTGAGCGTTGAGGCTGAGAACTCGGTGCTTAGGGCTCAGGTGGGTGAGCTTAGTCACAGGTTAGAGTCTCTGAATGAGATCGTTGACGTGTTGAATGCCACCACTGTGGCGGGTTTTGGAGCAGCAGCAACATCGAGCACCTTCGTTGAGCCAATTAATAATAATAGCTTCTTCAACCCGTTGAATATGGGGTATCTGAACCACCCTATTATGGCTTCTGCGGATATATTGCAGTATTGA
Predicted protein sequences of Glyma.12g040600
>Glyma.12g040600.1.p sequence-type=predicted peptide transcript=Glyma.12g040600.1 locus=Glyma.12g040600 id=Glyma.12g040600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASSSGTSSGSSLLQNSGSEEDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIVDVLNATTVAGFGAAATSSTFVEPINNNSFFNPLNMGYLNHPIMASADILQY*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo