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Report for Sequence Feature Glyma.12g028400

Feature Type:gene_model
Chromosome:Gm12
Start:2118140
stop:2122580
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g028400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G18630.1AT ATUNG,UNG JGI N/AIEA
3.2.2.27EC uracil-DNA glycosylase JGI N/AIEA
GO:0006281GO-bp DNA repair JGI N/AIEA
GO:0006284GO-bp base-excision repair JGI N/AIEA
GO:0004844GO-mf uracil DNA N-glycosylase activity JGI N/AIEA
K03648KEGG DNA repair and recombination proteins JGI N/AIEA
KOG2994 KOG Uracil DNA glycosylase JGI N/AIEA
PTHR11264PantherFam URACIL-DNA GLYCOSYLASE JGI N/AIEA
PF03167Pfam Uracil DNA glycosylase superfamily JGI N/AIEA

Gene model name correspondences to Glyma.12g028400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g03220 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g028400
>Glyma.12g028400.1 sequence-type=CDS polypeptide=Glyma.12g028400.1.p locus=Glyma.12g028400 id=Glyma.12g028400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCTGCGCCATCGAGAACCCTAACGGACTTTTTCCAACCCGCTTCGAAGCGCTTGAAGCCCACTCTCCCCGCATCATGCAAATCCGACGACGCCAATGCTTCCACGCTCTCCGTCGATCAGAAGTTGCGCATGGAATACAACAAGCTCCTCGCCAAGTCCAAGAGGAATCTCAAACTCTGCGTCGAGAGGGTCTCCAAAAGCAAAGAATCAGGTTTAGGTGGCGTGAAGCTGGAAGAGCTGCTGGTGGAAGAAACGTGGTTGGAAGCTCTACCTGGTGAACTCCAAAAACCCTATGCCCTCACTCTCTCCAAATTCGTTGAAAGTGAGATTTCGGGCGGAGACGGCGTCATTTTCCCTCCGACGCACTTGATTTTCAACGCTCTTAACTCCACGCCTTTTCATACAGTGAAAGCTGTTATCCTTGGCCAGGACCCTTATCATGGTCCTGGTCAAGCAATGGGGCTTTCATTCTCGGTTCCCGAGGGAATCAAAGTCCCTTCCAGTTTGGTAAATATATTTAAGGAACTTCACCAAGACCTTGGCTGCTCCATTCCAACTCATGGAAATCTTCAAAAATGGGCTGTGCAGGGTGTTCTCTTGCTGAATGCTGTTCTCACAGTCAGGAAGCATCAAGCAAATTCTCATGCCAAAAAAGGCTGGGAACAATTTACTGATGTTGTTATCAAGACCATCTCACAGAAGAAGGAAGGAGTTGTGTTTCTGTTGTGGGGAAACTCTGCTCGGGAAAAATCTAGGTTAATTGATGCAAGAAAGCATCATGTTCTTACTGCTGCACATCCTTCTGGTTTGTCTGCAAATAGAGGCTTCTTTGGCTGCAGGCACTTCTCTCGCACTAACCAACTTCTGGAGCAAATGGGGATTGATCCAATAGATTGGCAACTATAA

>Glyma.12g028400.2 sequence-type=CDS polypeptide=Glyma.12g028400.2.p locus=Glyma.12g028400 id=Glyma.12g028400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCTGCGCCATCGAGAACCCTAACGGACTTTTTCCAACCCGCTTCGAAGCGCTTGAAGCCCACTCTCCCCGCATCATGCAAATCCGACGACGCCAATGCTTCCACGCTCTCCGTCGATCAGAAGTTGCGCATGGAATACAACAAGCTCCTCGCCAAGTCCAAGAGGAATCTCAAACTCTGCGTCGAGAGGGTCTCCAAAAGCAAAGGTTTAGGTGGCGTGAAGCTGGAAGAGCTGCTGGTGGAAGAAACGTGGTTGGAAGCTCTACCTGGTGAACTCCAAAAACCCTATGCCCTCACTCTCTCCAAATTCGTTGAAAGTGAGATTTCGGGCGGAGACGGCGTCATTTTCCCTCCGACGCACTTGATTTTCAACGCTCTTAACTCCACGCCTTTTCATACAGTGAAAGCTGTTATCCTTGGCCAGGACCCTTATCATGGTCCTGGTCAAGCAATGGGGCTTTCATTCTCGGTTCCCGAGGGAATCAAAGTCCCTTCCAGTTTGGTAAATATATTTAAGGAACTTCACCAAGACCTTGGCTGCTCCATTCCAACTCATGGAAATCTTCAAAAATGGGCTGTGCAGGGTGTTCTCTTGCTGAATGCTGTTCTCACAGTCAGGAAGCATCAAGCAAATTCTCATGCCAAAAAAGGCTGGGAACAATTTACTGATGTTGTTATCAAGACCATCTCACAGAAGAAGGAAGGAGTTGTGTTTCTGTTGTGGGGAAACTCTGCTCGGGAAAAATCTAGGTTAATTGATGCAAGAAAGCATCATGTTCTTACTGCTGCACATCCTTCTGGTTTGTCTGCAAATAGAGGCTTCTTTGGCTGCAGGCACTTCTCTCGCACTAACCAACTTCTGGAGCAAATGGGGATTGATCCAATAGATTGGCAACTATAA
Predicted protein sequences of Glyma.12g028400
>Glyma.12g028400.1.p sequence-type=predicted peptide transcript=Glyma.12g028400.1 locus=Glyma.12g028400 id=Glyma.12g028400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASAPSRTLTDFFQPASKRLKPTLPASCKSDDANASTLSVDQKLRMEYNKLLAKSKRNLKLCVERVSKSKESGLGGVKLEELLVEETWLEALPGELQKPYALTLSKFVESEISGGDGVIFPPTHLIFNALNSTPFHTVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCSIPTHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDVVIKTISQKKEGVVFLLWGNSAREKSRLIDARKHHVLTAAHPSGLSANRGFFGCRHFSRTNQLLEQMGIDPIDWQL*

>Glyma.12g028400.2.p sequence-type=predicted peptide transcript=Glyma.12g028400.2 locus=Glyma.12g028400 id=Glyma.12g028400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASAPSRTLTDFFQPASKRLKPTLPASCKSDDANASTLSVDQKLRMEYNKLLAKSKRNLKLCVERVSKSKGLGGVKLEELLVEETWLEALPGELQKPYALTLSKFVESEISGGDGVIFPPTHLIFNALNSTPFHTVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCSIPTHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDVVIKTISQKKEGVVFLLWGNSAREKSRLIDARKHHVLTAAHPSGLSANRGFFGCRHFSRTNQLLEQMGIDPIDWQL*






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