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Report for Sequence Feature Glyma.12g025400

Feature Type:gene_model
Chromosome:Gm12
Start:1830517
stop:1831667
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g025400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G27850.1AT RPL12-C JGI N/AIEA
GO:0006412GO-bp translation JGI N/AIEA
GO:0003735GO-mf structural constituent of ribosome JGI N/AIEA
K02935KEGG Ribosome JGI N/AIEA
KOG1715 KOG Mitochondrial/chloroplast ribosomal protein L12 JGI N/AIEA
PF00542Pfam Ribosomal protein L7/L12 C-terminal domain JGI N/AIEA
PF16320Pfam Ribosomal protein L7/L12 dimerisation domain JGI N/AIEA

Gene model name correspondences to Glyma.12g025400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g02850 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g025400
>Glyma.12g025400.1 sequence-type=CDS polypeptide=Glyma.12g025400.1.p locus=Glyma.12g025400 id=Glyma.12g025400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCTCAACTACACTAACAACCCTCTCCCTCCGCAACCTCTCTTATCCTACACCCTCCTCCTCTTCTTACCCTACGCACCTCTCCGCCAACCCCTCCTCCCTCCAATTCCCCAACTTCTCCCACCGCGCCACCACCACGCGCCGCGCCCGCGTCGTCGTCGTCTCCGCCGTCGAGGCACCGGAGAAAATCACCAAGCTCGGCGACGAAATCGCGGGACTCACGCTCGAGGAAGCCAAGAACCTCGTCGACTTCCTCCAGGACAAGCTCGGCGTCTCCGCGGCAGCGTTCGCCCCCGTAGCCGTCGCCGCGGGTGCCGTCGGCGCCGTGGCGGACGCTCCGGCGGCGGTGGAGGAGAAGACGGAGTTCGACGTGTTGATCGAGGAGGTGCCGAGCAACGCGAGAATCGCGGTGATTAAGGCGGTGAGGGCGCTGACTAACCTGGCGCTGAAAGAGGCGAAGGAGTTGATAGAAGGGTTGCCGAAGAAGTTCAAGGAAGGGATTTCGAAGGACGAAGCTGAAGATGCGAAGAAGCAACTTGAAGAAGCCGGTGCCAAGGTTACCATTGCTTAG
Predicted protein sequences of Glyma.12g025400
>Glyma.12g025400.1.p sequence-type=predicted peptide transcript=Glyma.12g025400.1 locus=Glyma.12g025400 id=Glyma.12g025400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASTTLTTLSLRNLSYPTPSSSSYPTHLSANPSSLQFPNFSHRATTTRRARVVVVSAVEAPEKITKLGDEIAGLTLEEAKNLVDFLQDKLGVSAAAFAPVAVAAGAVGAVADAPAAVEEKTEFDVLIEEVPSNARIAVIKAVRALTNLALKEAKELIEGLPKKFKEGISKDEAEDAKKQLEEAGAKVTIA*






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