SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.12g023600

Feature Type:gene_model
Chromosome:Gm12
Start:1725438
stop:1728952
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g023600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G37170.1AT PIP2;2,PIP2B JGI N/AIEA
GO:0006810GO-bp transport JGI N/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0005215GO-mf transporter activity JGI N/AIEA
KOG0223 KOG Aquaporin (major intrinsic protein family) JGI N/AIEA
PTHR19139PantherFam AQUAPORIN TRANSPORTER JGI N/AIEA
PF00230Pfam Major intrinsic protein JGI N/AIEA

Proteins Associated with Glyma.12g023600
LocusGene SymbolProtein Name
XIP1-1 aquaporin XIP1-1

Gene model name correspondences to Glyma.12g023600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g02640 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g023600
>Glyma.12g023600.1 sequence-type=CDS polypeptide=Glyma.12g023600.1.p locus=Glyma.12g023600 id=Glyma.12g023600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATGACCAATTTTCGACCGTTCATAGTCATAGTCGTGAGCCAATGCCTAGGGGCTTAGTTCATGAGAAGTCTTCAGAGCCCAAATTTCTTGCCTACATTGGTGCCCACGAATTTTTCACAATAGAGACGTGGAAAGCAGCTTTGGTAGAGTTAATTGCAACTGCTGCACTAATGTTCACCCTAACGAGTTGCAATATTGCATGTTTGGAGTCACAAGATGTCAATCCAAAGCTTATTCTTCCCTTTGCAGTCTTCATCATAGTATTCTTGTTTCTAATTGTGATAGTTCCTCTATCCGGGGGTCATATGAACCCTATTTTTACATTCATTGCGGCTTTAAAGGGTGTTGTGACCCTTTCTCGTGCTCTCCTTTACGTGTCAGCTCAATGCATTGGCTCAATAATTGGTTTCTTTGTACTCAAGAGTGTGATGGAGCCAAAATTAGCAGACACATATTCTTTGGGAGGTTGTGCCCTTGGTGACAAAGGACAAAGTTCTGGCCTAAGGCCACAAGATGCTTTGTTGTTGGAATTCTCTTGCACATTCTTAGTACTCTTTGTGGGTCTAACGTTGGCATTTGATAAGAAAAGGTGCAAGGAATTGGGCTTGCCAATGGTTTGTTTGGTGGTTGCAGCATCCTTGGCACTGGCAGTGTTTGTGTCCATAACTGTAACTGGCAGGCCTGGCTATGCAGGTGCTGGGCTGAGCCCTGCAAGATGCCTAGGTCCAGCGTTGCTTCATGGAGGCCCACTATGGAATGGGCATTGGGTTTTCTGGCTTGGGCCTTTCTTGGCCTGCATAATCTATTATAGTGTCTCCATTAATCTACCAAAGAAAGGTTTGAATTGGGTTGATGGAGAATATGATGTCTTAAGATTGGCTCTGGGTTCTTGTAGGACTATTTCTAATAATACGGATTTAAATGATCTTTCTTGA
Predicted protein sequences of Glyma.12g023600
>Glyma.12g023600.1.p sequence-type=predicted peptide transcript=Glyma.12g023600.1 locus=Glyma.12g023600 id=Glyma.12g023600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDDQFSTVHSHSREPMPRGLVHEKSSEPKFLAYIGAHEFFTIETWKAALVELIATAALMFTLTSCNIACLESQDVNPKLILPFAVFIIVFLFLIVIVPLSGGHMNPIFTFIAALKGVVTLSRALLYVSAQCIGSIIGFFVLKSVMEPKLADTYSLGGCALGDKGQSSGLRPQDALLLEFSCTFLVLFVGLTLAFDKKRCKELGLPMVCLVVAASLALAVFVSITVTGRPGYAGAGLSPARCLGPALLHGGPLWNGHWVFWLGPFLACIIYYSVSINLPKKGLNWVDGEYDVLRLALGSCRTISNNTDLNDLS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo