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Report for Sequence Feature Glyma.12g010800

Feature Type:gene_model
Chromosome:Gm12
Start:785647
stop:790985
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g010800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G51950.1AT JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
PTHR24009PantherFam RNA-BINDING (RRM/RBD/RNP MOTIFS) JGI N/AIEA
PTHR24009:SF3PantherFam RRM DOMAIN-CONTAINING PROTEIN-RELATED JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF00642Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) JGI N/AIEA

Gene model name correspondences to Glyma.12g010800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g01340 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g010800
>Glyma.12g010800.1 sequence-type=CDS polypeptide=Glyma.12g010800.1.p locus=Glyma.12g010800 id=Glyma.12g010800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATAGTTACGAAGCTACAAGAATTGTGTTTTCAAGGATCCAAAACTTGGATGCTGAAAATGCTTCCAAAATCATGGGTTTACTTCTGCTTCAGGACCATGGTGAGAAAGAAATGATTAGATTAGCATTTGGTCCAGAAGCACTTGTTCACTCTGTGATTCTCAAAGCCCGCAAGGACTTGGGTTTACCTTCGAACTCTCCGCCCACACCCTCCACTCCTCCCTCTCCTTCACCCTTCATTTCTAGGCAAAACTCAAACACTTCTTCAAGACTCAGTGTCAGTGGTATCAACCTCCCTCCTCCTCTCACTATCCCAAACCCTTCTGCTTCATGGCCTACTATGTCTGAGCTTCAAACCGATTTGGTTGCTGGCTCTTCTACTTCTTTATCTTCCTTACCCTTCTATGCTAACGGAGGCTCGGATCCAATTGATGAGTTCCAACTTCAAGACCAGCTTTCTTTCCTGAATGATGGTTCTAATACTAGCATTTCTCACAAGAACAACCCAGATTTGTTTTACCCGACTTACTCAGACTTTTCTTCAAGTCCTACTACTGCTGCTGACCCTACCCTTTTTCCTTCCTATGGTTGGGGAGGGTCTCTTCATCGTAGGAGTTGTTCAGTCAATGATGCTTGTTTGGGCACTGAGGACCCTAATTCTGGGTTGGGATGGAAGCCTTGTCTTTACTTTGCTAGAGGGTACTGTAAAAATGGGACTAGTTGCAGGTTCCTTCATGGTGGACTTGGAGATGCTGATGCTGCAATGGTTGGCTCTCCTAGCAAGATTGAGATGATGGAGCAGTGCCATGAGCTCTTACGATCCAAATCTGCTCAACAACAAAGATTGGCTGCTGCTTCTCAGCTCATGTCCTCTTCCACTTTTCCATACTCCCCTAAGTGCATGAATTTCCTGTTGCAGCAGCAACAGAATGATACCCAAAGAGCGGCAGCTGCAGCTCTGATGATGAGTGAGGATTTGCATAAATTTGGACGATCCAGGCTTGAAAGAAATGATTTTTCTTTGAACAGTCCTGGCATGGTAAACCCAGCTTCCAGGCAGATCTACTTGACTTTCCCAGCAGATAGCACTTTCAGGGAGGAAGATGTTTCAAATTACTTCAGCATATATGGTCCAGTCCAAGACGTGAGGATCCCATACCAGCAGAAGCGAATGTTTGGTTTTGTTACCTTTGTTTATCCAGAGACCGTGAAGCTTATTCTATCTAAAGGAAACCCTCATTTTGTGTGTGATGCACGAGTGCTTGTTAAGCCTTACAAGGAGAAGGGCAAAGTCCCAGACAAGAAGCTGCAGCAGCAGCAGGTAGATAGAGGAGATTTTTCACCATGTGGTACTCCTACTGGATTAGATGCCAGAGACCACCAATTTGATCTTCAACTTGGAGGCAGAATGTTCTACAATACTCAAGACATGCTGTGGAGGAGGAAGCTGGAGGAGCAGGCTGATTTGCAGCAAGCTCTTGAGCTACAAAGTAGGAGGCTAATGGGTCTGCAACTTCTTGACATCAAGAAGCATCACCAGCGTGCACTCTGCACTGGAAGCCCAATTCCTTCCCCCACCCATTCTCCTAACATGTTCAACCAAAATCTTGTTCCTTCTTTTCACATCACTTCAGAGGCCCCAAAGGAGAGTGGTTCAACTTCTGCTCCAGCTGGTACTGCGTCAGTTTCTACTGGTCAACAGTCAGTCAACATTTCTGTTGGCAAGGAAGTGATGGTCAATGGCGAGGATGGATATGATGAAGGCAATGGCAGGCAGAGCTCTAGTCATGACGATTGTGATTTGCAAGAATGTTTAGAGCATAATCTCCCTGATAGCCCTTTTGCTTCCCCAACAAAAGCTACTGGTCCTGGAGGCTTCATGGCTCCCTTCTCCAATGGACCTAATGAGGCCATTGATGCAGATGCCTCGGCTGCATCTGCCAACTCCAAATTTGGCACTGGCACATTACTTCCTGCAGCATCGGCTCTTGACATGGGAACTTTCAAATCCTTTAACTGCCAAATACCAAGGTTCTCTTCTGGTCATGGAACTATTGGGATGTTTGCTGGCACCGGTGGACCGATTGGCATTTAG

>Glyma.12g010800.3 sequence-type=CDS polypeptide=Glyma.12g010800.3.p locus=Glyma.12g010800 id=Glyma.12g010800.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATAGTTACGAAGCTACAAGAATTGTGTTTTCAAGGATCCAAAACTTGGATGCTGAAAATGCTTCCAAAATCATGGGTTTACTTCTGCTTCAGGACCATGGTGAGAAAGAAATGATTAGATTAGCATTTGGTCCAGAAGCACTTGTTCACTCTGTGATTCTCAAAGCCCGCAAGGACTTGGGTTTACCTTCGAACTCTCCGCCCACACCCTCCACTCCTCCCTCTCCTTCACCCTTCATTTCTAGGCAAAACTCAAACACTTCTTCAAGACTCAGTGTCAGTGGTATCAACCTCCCTCCTCCTCTCACTATCCCAAACCCTTCTGCTTCATGGCCTACTATGTCTGAGCTTCAAACCGATTTGGTTGCTGGCTCTTCTACTTCTTTATCTTCCTTACCCTTCTATGCTAACGGAGGCTCGGATCCAATTGATGAGTTCCAACTTCAAGACCAGCTTTCTTTCCTGAATGATGGTTCTAATACTAGCATTTCTCACAAGAACAACCCAGATTTGTTTTACCCGACTTACTCAGACTTTTCTTCAAGTCCTACTACTGCTGCTGACCCTACCCTTTTTCCTTCCTATGGTTGGGGAGGGTCTCTTCATCGTAGGAGTTGTTCAGTCAATGATGCTTGTTTGGGCACTGAGGACCCTAATTCTGGGTTGGGATGGAAGCCTTGTCTTTACTTTGCTAGAGGGTACTGTAAAAATGGGACTAGTTGCAGGTTCCTTCATGGTGGACTTGGAGATGCTGATGCTGCAATGGTTGGCTCTCCTAGCAAGATTGAGATGATGGAGCAGTGCCATGAGCTCTTACGATCCAAATCTGCTCAACAACAAAGATTGGCTGCTGCTTCTCAGCTCATGTCCTCTTCCACTTTTCCATACTCCCCTAAGTGCATGAATTTCCTGTTGCAGCAGCAACAGAATGATACCCAAAGAGCGGCAGCTGCAGCTCTGATGATGAGTGAGGATTTGCATAAATTTGGACGATCCAGGCTTGAAAGAAATGATTTTTCTTTGAACAGTCCTGGCATGGTAAACCCAGCTTCCAGGCAGATCTACTTGACTTTCCCAGCAGATAGCACTTTCAGGGAGGAAGATGTTTCAAATTACTTCAGCATATATGGTCCAGTCCAAGACGTGAGGATCCCATACCAGCAGAAGCGAATGTTTGGTTTTGTTACCTTTGTTTATCCAGAGACCGTGAAGCTTATTCTATCTAAAGGAAACCCTCATTTTGTGTGTGATGCACGAGTGCTTGTTAAGCCTTACAAGGAGAAGGGCAAAGTCCCAGACAAGTACAGGAAGCTGCAGCAGCAGCAGGTAGATAGAGGAGATTTTTCACCATGTGGTACTCCTACTGGATTAGATGCCAGAGACCACCAATTTGATCTTCAACTTGGAGGCAGAATGTTCTACAATACTCAAGACATGCTGTGGAGGAGGAAGCTGGAGGAGCAGGCTGATTTGCAGCAAGCTCTTGAGCTACAAAGTAGGAGGCTAATGGGTCTGCAACTTCTTGACATCAAGAAGCATCACCAGCGTGCACTCTGCACTGGAAGCCCAATTCCTTCCCCCACCCATTCTCCTAACATGTTCAACCAAAATCTTGTTCCTTCTTTTCACATCACTTCAGAGGCCCCAAAGGAGAGTGGTTCAACTTCTGCTCCAGCTGGTACTGCGTCAGTTTCTACTGGTCAACAGTCAGTCAACATTTCTGTTGGCAAGGAAGTGATGGTCAATGGCGAGGATGGATATGATGAAGGCAATGGCAGGCAGAGCTCTAGTCATGACGATTGTGATTTGCAAGAATGTTTAGAGCATAATCTCCCTGATAGCCCTTTTGCTTCCCCAACAAAAGCTACTGGTCCTGGAGGCTTCATGGCTCCCTTCTCCAATGGACCTAATGAGGCCATTGATGCAGATGCCTCGGCTGCATCTGCCAACTCCAAATTTGGCACTGGCACATTACTTCCTGCAGCATCGGCTCTTGACATGGGAACTTTCAAATCCTTTAACTGCCAAATACCAAGGTTCTCTTCTGGTCATGGAACTATTGGGATGTTTGCTGGCACCGGTGGACCGATTGGCATTTAG
Predicted protein sequences of Glyma.12g010800
>Glyma.12g010800.1.p sequence-type=predicted peptide transcript=Glyma.12g010800.1 locus=Glyma.12g010800 id=Glyma.12g010800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDSYEATRIVFSRIQNLDAENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKDLGLPSNSPPTPSTPPSPSPFISRQNSNTSSRLSVSGINLPPPLTIPNPSASWPTMSELQTDLVAGSSTSLSSLPFYANGGSDPIDEFQLQDQLSFLNDGSNTSISHKNNPDLFYPTYSDFSSSPTTAADPTLFPSYGWGGSLHRRSCSVNDACLGTEDPNSGLGWKPCLYFARGYCKNGTSCRFLHGGLGDADAAMVGSPSKIEMMEQCHELLRSKSAQQQRLAAASQLMSSSTFPYSPKCMNFLLQQQQNDTQRAAAAALMMSEDLHKFGRSRLERNDFSLNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKKLQQQQVDRGDFSPCGTPTGLDARDHQFDLQLGGRMFYNTQDMLWRRKLEEQADLQQALELQSRRLMGLQLLDIKKHHQRALCTGSPIPSPTHSPNMFNQNLVPSFHITSEAPKESGSTSAPAGTASVSTGQQSVNISVGKEVMVNGEDGYDEGNGRQSSSHDDCDLQECLEHNLPDSPFASPTKATGPGGFMAPFSNGPNEAIDADASAASANSKFGTGTLLPAASALDMGTFKSFNCQIPRFSSGHGTIGMFAGTGGPIGI*

>Glyma.12g010800.3.p sequence-type=predicted peptide transcript=Glyma.12g010800.3 locus=Glyma.12g010800 id=Glyma.12g010800.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDSYEATRIVFSRIQNLDAENASKIMGLLLLQDHGEKEMIRLAFGPEALVHSVILKARKDLGLPSNSPPTPSTPPSPSPFISRQNSNTSSRLSVSGINLPPPLTIPNPSASWPTMSELQTDLVAGSSTSLSSLPFYANGGSDPIDEFQLQDQLSFLNDGSNTSISHKNNPDLFYPTYSDFSSSPTTAADPTLFPSYGWGGSLHRRSCSVNDACLGTEDPNSGLGWKPCLYFARGYCKNGTSCRFLHGGLGDADAAMVGSPSKIEMMEQCHELLRSKSAQQQRLAAASQLMSSSTFPYSPKCMNFLLQQQQNDTQRAAAAALMMSEDLHKFGRSRLERNDFSLNSPGMVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILSKGNPHFVCDARVLVKPYKEKGKVPDKYRKLQQQQVDRGDFSPCGTPTGLDARDHQFDLQLGGRMFYNTQDMLWRRKLEEQADLQQALELQSRRLMGLQLLDIKKHHQRALCTGSPIPSPTHSPNMFNQNLVPSFHITSEAPKESGSTSAPAGTASVSTGQQSVNISVGKEVMVNGEDGYDEGNGRQSSSHDDCDLQECLEHNLPDSPFASPTKATGPGGFMAPFSNGPNEAIDADASAASANSKFGTGTLLPAASALDMGTFKSFNCQIPRFSSGHGTIGMFAGTGGPIGI*






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