SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.12g006400

Feature Type:gene_model
Chromosome:Gm12
Start:485530
stop:489760
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g006400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G07660.1AT SMC6A JGI N/AIEA
PTHR19306PantherFam STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 JGI N/AIEA
PTHR19306:SF6PantherFam STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6 JGI N/AIEA
PF13476Pfam AAA domain JGI N/AIEA

Gene model name correspondences to Glyma.12g006400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g00901 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g006400
>Glyma.12g006400.5 sequence-type=CDS polypeptide=Glyma.12g006400.5.p locus=Glyma.12g006400 id=Glyma.12g006400.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTTTCCCACACTCTTCATCAACCCACCGCAGGCATCGTCAAGCAACTTCGACTCGAGAACTTCATGTGCCATTCCAAACACGAGACCGAGTTCGGAAACCACGTCAATTTCATCACCGGTCAAAACGGAAGTGGTAAGAGTACAATCCTAGCTGCACTGTGTGTTGCATTTGGCTGTCGAGCCAAAGAGACTCAAAGGACTTCCACTTTGAAGGATTTCATTAAAACTGGCGCCACTGATGCTGTCATCCAAGTTGAAATTCAAAATGAAGGGGAGGGTGCTTTTAAACCTGAAATATATGGTCCTGTTATCATCGTAGAACGTAGGATATCTGAATCAACAAGTTCTGCTACATTAAAAGACCACCAAGGAAGGAAGGTTGTCAGTTGGAAAACAGATCTTCTAGAAATCGTTGAACATTTTAATATTGATGTGGAGAATCCATGTGTAATTATGAATCAAGACAAAAGCAGAGAATTTTTGCATTCTGGGAATAACAAAGATAAATTTAAGTTCTTTTACAAGGTCACGCTTCTTCAGCAAGTCAATGATCTTCTGGAAAGCATTTCCCACAGAGGGGCATTTTATGGTAGCGGTTTTGGGTAA
Predicted protein sequences of Glyma.12g006400
>Glyma.12g006400.5.p sequence-type=predicted peptide transcript=Glyma.12g006400.5 locus=Glyma.12g006400 id=Glyma.12g006400.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVSHTLHQPTAGIVKQLRLENFMCHSKHETEFGNHVNFITGQNGSGKSTILAALCVAFGCRAKETQRTSTLKDFIKTGATDAVIQVEIQNEGEGAFKPEIYGPVIIVERRISESTSSATLKDHQGRKVVSWKTDLLEIVEHFNIDVENPCVIMNQDKSREFLHSGNNKDKFKFFYKVTLLQQVNDLLESISHRGAFYGSGFG*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo