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Report for Sequence Feature Glyma.12g004900

Feature Type:gene_model
Chromosome:Gm12
Start:372515
stop:377441
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g004900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G12260.1AT ANAC007,EMB2749,NAC007,VND4 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
PTHR31989PantherFam NAC DOMAIN-CONTAINING PROTEIN 82-RELATED JGI N/AIEA
PF02365Pfam No apical meristem (NAM) protein JGI N/AIEA

Proteins Associated with Glyma.12g004900
LocusGene SymbolProtein Name
NAC080 NAC Transcription Factor gene 80

Gene model name correspondences to Glyma.12g004900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g00760 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g004900
>Glyma.12g004900.1 sequence-type=CDS polypeptide=Glyma.12g004900.1.p locus=Glyma.12g004900 id=Glyma.12g004900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAATACTTTTACTCATGTCCCCCCCGGTTTCAGGTTCCATCCTACGGATGAAGAACTTGTTGATTACTACCTTAGGAAGAAAATTACTTCAGGGAGGATTGACCTAGATGTCATAAAAGATGTTGACCTCTACAAAATTGAGCCATGGGATCTTCAAGAGATTTGCAGAATAGGAACAGAAGAACAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACTGGAACTCGCACGAATAGAGCGACTGCAGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAGGCAATCTATTCCAAGCATGAGCTGATAGGCATGAGGAAGACCTTAGTCTTTTATAAAGGTCGAGCTCCAAATGGACAAAAGTCAGATTGGATAATGCACGAGTATCGGCTTGAAACAGATGAAAATGGCACTCCACAGGAAGAAGGATGGGTTGTGTGTAGAGTATTCAAGAAGAGAGTAACAACCATGCGTAAAGTGAGTGAGCATGACTCCCCCTGTTGGTATGATGACCAAGTCCCTTTCATGCTTGACTTAGACTCACCAAAGCAAACCTCTCAATCTAATTTGGTCTACCAGCTACCATATCCTTGCAAGCAAGAGCTAGATTTGCCATACCAATTGCCTCGTGACCACTTTCTCCAGCTTCCACTTCTAGAGAGCCCAAAACTGCTTCAATCTGCTTCTGCTATAACCCCTAATAATCCCATGGCAGCATATGTTCTAGACCATGTAAACCACTCAACTTCTCTGCTTCCCCCATCCCTCATACAAGAAGAACAGCAAAACTTTCAGGCAACCTATGGCAACAGCAATTCCAATGAACAAGCAGTGGATCCAGTAATTGATTGGCGAGTGCTTGACAAGTTTGTTGCTTCACAACTTAGTCAAGATGCTTCCAAAGACAATATCTTTCAAGGCACGGACAATAGCAATGTACAGTTCAGACATCTGGACAAACAAGAGCTAGTGGTGCCTGAACAAAATGCATCAACATCAAACTCCAGCTGCCCAATTGATTTGTGGAAATAG

>Glyma.12g004900.2 sequence-type=CDS polypeptide=Glyma.12g004900.2.p locus=Glyma.12g004900 id=Glyma.12g004900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAATACTTTTACTCATGTCCCCCCCGGTTTCAGGTTCCATCCTACGGATGAAGAACTTGTTGATTACTACCTTAGGAAGAAAATTACTTCAGGGAGGATTGACCTAGATGTCATAAAAGATGTTGACCTCTACAAAATTGAGCCATGGGATCTTCAAGAGATTTGCAGAATAGGAACAGAAGAACAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACTGGAACTCGCACGAATAGAGCGACTGCAGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAGGCAATCTATTCCAAGCATGAGCTGATAGGCATGAGGAAGACCTTAGTCTTTTATAAAGGTCGAGCTCCAAATGGACAAAAGTCAGATTGGATAATGCACGAGTATCGGCTTGAAACAGATGAAAATGGCACTCCACAGGAAGAAGGATGGGTTGTGTGTAGAGTATTCAAGAAGAGAGTAACAACCATGCGTAAAGTGAGTGAGCATGACTCCCCCTGTTGGTATGATGACCAAGTCCCTTTCATGCTTGACTTAGACTCACCAAAGCAAACCTCTCAATCTAATTTGGTCTACCAGCTACCATATCCTTGCAAGCAAGAGCTAGATTTGCCATACCAATTGCCTCGTGACCACTTTCTCCAGCTTCCACTTCTAGAGAGCCCAAAACTGCTTCAATCTGCTTCTGCTATAACCCCTAATAATCCCATGGCAGCATATGTTCTAGACCATGTAAACCACTCAACTTCTCTGCTTCCCCCATCCCTCATACAAGAAGAACAGCAAAACTTTCAGGCAACCTATGGCAACAGCAATTCCAATGAACAAGCAGTGGATCCAGTAATTGATTGGCGAGTGCTTGACAAGTTTGTTGCTTCACAACTTAGTCAAGATGCTTCCAAAGACAATATCTTTCAAGGCACGGACAATAGCAATGTACAGTTCAGACATCTGGACAAACAAGAGCTAGTGGTGCCTGAACAAAATGCATCAACATCAAACTCCAGCTGCCCAATTGATTTGTGGAAATAG

>Glyma.12g004900.3 sequence-type=CDS polypeptide=Glyma.12g004900.3.p locus=Glyma.12g004900 id=Glyma.12g004900.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTGACCTCTACAAAATTGAGCCATGGGATCTTCAAGGTAGTACTGATCGAGTTCATAGCATCTAAATTCAAGAGGGACAATTTTATTGGTGAAAGATATATATTATTTGTTAACTTCTTCATTTTTTTTTCTTTTTTGTTTTTAAATTTTAAAGAGATTTGCAGAATAGGAACAGAAGAACAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACTGGAACTCGCACGAATAGAGCGACTGCAGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAGGCAATCTATTCCAAGCATGAGCTGATAGGCATGAGGAAGACCTTAGTCTTTTATAAAGGTCGAGCTCCAAATGGACAAAAGTCAGATTGGATAATGCACGAGTATCGGCTTGAAACAGATGAAAATGGCACTCCACAGGAAGAAGGATGGGTTGTGTGTAGAGTATTCAAGAAGAGAGTAACAACCATGCGTAAAGTGAGTGAGCATGACTCCCCCTGTTGGTATGATGACCAAGTCCCTTTCATGCTTGACTTAGACTCACCAAAGCAAACCTCTCAATCTAATTTGGTCTACCAGCTACCATATCCTTGCAAGCAAGAGCTAGATTTGCCATACCAATTGCCTCGTGACCACTTTCTCCAGCTTCCACTTCTAGAGAGCCCAAAACTGCTTCAATCTGCTTCTGCTATAACCCCTAATAATCCCATGGCAGCATATGTTCTAGACCATGTAAACCACTCAACTTCTCTGCTTCCCCCATCCCTCATACAAGAAGAACAGCAAAACTTTCAGGCAACCTATGGCAACAGCAATTCCAATGAACAAGCAGTGGATCCAGTAATTGATTGGCGAGTGCTTGACAAGTTTGTTGCTTCACAACTTAGTCAAGATGCTTCCAAAGACAATATCTTTCAAGGCACGGACAATAGCAATGTACAGTTCAGACATCTGGACAAACAAGAGCTAGTGGTGCCTGAACAAAATGCATCAACATCAAACTCCAGCTGCCCAATTGATTTGTGGAAATAG
Predicted protein sequences of Glyma.12g004900
>Glyma.12g004900.1.p sequence-type=predicted peptide transcript=Glyma.12g004900.1 locus=Glyma.12g004900 id=Glyma.12g004900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNTFTHVPPGFRFHPTDEELVDYYLRKKITSGRIDLDVIKDVDLYKIEPWDLQEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHELIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRVTTMRKVSEHDSPCWYDDQVPFMLDLDSPKQTSQSNLVYQLPYPCKQELDLPYQLPRDHFLQLPLLESPKLLQSASAITPNNPMAAYVLDHVNHSTSLLPPSLIQEEQQNFQATYGNSNSNEQAVDPVIDWRVLDKFVASQLSQDASKDNIFQGTDNSNVQFRHLDKQELVVPEQNASTSNSSCPIDLWK*

>Glyma.12g004900.2.p sequence-type=predicted peptide transcript=Glyma.12g004900.2 locus=Glyma.12g004900 id=Glyma.12g004900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNTFTHVPPGFRFHPTDEELVDYYLRKKITSGRIDLDVIKDVDLYKIEPWDLQEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHELIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRVTTMRKVSEHDSPCWYDDQVPFMLDLDSPKQTSQSNLVYQLPYPCKQELDLPYQLPRDHFLQLPLLESPKLLQSASAITPNNPMAAYVLDHVNHSTSLLPPSLIQEEQQNFQATYGNSNSNEQAVDPVIDWRVLDKFVASQLSQDASKDNIFQGTDNSNVQFRHLDKQELVVPEQNASTSNSSCPIDLWK*

>Glyma.12g004900.3.p sequence-type=predicted peptide transcript=Glyma.12g004900.3 locus=Glyma.12g004900 id=Glyma.12g004900.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLTSTKLSHGIFKVVLIEFIASKFKRDNFIGERYILFVNFFIFFSFLFLNFKEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHELIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRVTTMRKVSEHDSPCWYDDQVPFMLDLDSPKQTSQSNLVYQLPYPCKQELDLPYQLPRDHFLQLPLLESPKLLQSASAITPNNPMAAYVLDHVNHSTSLLPPSLIQEEQQNFQATYGNSNSNEQAVDPVIDWRVLDKFVASQLSQDASKDNIFQGTDNSNVQFRHLDKQELVVPEQNASTSNSSCPIDLWK*






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