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Report for Sequence Feature Glyma.12g004000

Feature Type:gene_model
Chromosome:Gm12
Start:313444
stop:319685
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g004000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G43640.2AT JGI N/AIEA
GO:0006614GO-bp SRP-dependent cotranslational protein targeting to membrane JGI N/AIEA
GO:0005786GO-cc signal recognition particle, endoplasmic reticulum targeting JGI N/AIEA
GO:0008312GO-mf 7S RNA binding JGI N/AIEA
GO:0030942GO-mf endoplasmic reticulum signal peptide binding JGI N/AIEA
PTHR12013PantherFam SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN JGI N/AIEA
PF02290Pfam Signal recognition particle 14kD protein JGI N/AIEA

Gene model name correspondences to Glyma.12g004000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g00660 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g004000
>Glyma.12g004000.2 sequence-type=CDS polypeptide=Glyma.12g004000.2.p locus=Glyma.12g004000 id=Glyma.12g004000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTTGAGCGCAGCACCAAGCTTGGCTCTGTTTGGGTTACTCTTAAACGATCATCTTTGAAATCTAAGGTGCAGAGGAATAAATTGGCCACTGCTGGTGAAGCAATTGAGTATAGATGCCTTATACGTGCCACTGATGGGAAAAAGACAATTTCTACTTCGGTTGGACCAAAGGATCATCAGCGCTTTCAAGCTTCTTATGCAACTATATTAAAGGCGCATATGACTGCTCTAAAGAAGAGAGAAAGGAAAGACAAGAAGAAGCCTGCAGAGGCAGATAAAAGAGAAGGGAGTTCAAAGAGACCAAAAAAGTCTTAA

>Glyma.12g004000.3 sequence-type=CDS polypeptide=Glyma.12g004000.3.p locus=Glyma.12g004000 id=Glyma.12g004000.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTTGAGCGCAGCACCAAGCTTGGCTCTGTTTGGGTTACTCTTAAACGATCATCTTTGAAATCTAAGGTGCAGAGGAATAAATTGGCCACTGCTGGTGAAGCAATTGAGTATAGATGCCTTATACGTGCCACTGATGGGAAAAAGACAATTTCTACTTCGGTTGGACCAAAGGATCATCAGCGCTTTCAAGCTTCTTATGCAACTATATTAAAGGCGCATATGACTGCTCTAAAGAAGAGAGAAAGGAAAGACAAGAAGAAGCCTGCAGAGGCAGATAAAAGAGAAGGGAGTTCAAAGAGACCAAAAAAGTCTTAA

>Glyma.12g004000.4 sequence-type=CDS polypeptide=Glyma.12g004000.4.p locus=Glyma.12g004000 id=Glyma.12g004000.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTTCTTCTGCAGCTAGATCCGTTTCTCAATGAGCTTACCAGCATGTTTGAGCGCAGCACCAAGCTTGGCTCTGTTTGGGTTACTCTTAAACGATCATCTTTGAAATCTAAGGTGCAGAGGAATAAATTGGCCACTGCTGGTGAAGCAATTGAGTATAGATGCCTTATACGTGCCACTGATGGGAAAAAGACAATTTCTACTTCGGTTGGACCAAAGGATCATCAGCGCTTTCAAGCTTCTTATGCAACTATATTAAAGGCGCATATGACTGCTCTAAAGAAGAGAGAAAGGAAAGACAAGAAGAAGCCTGCAGAGGCAGATAAAAGAGAAGGGAGTTCAAAGAGACCAAAAAAGTCTTAA
Predicted protein sequences of Glyma.12g004000
>Glyma.12g004000.2.p sequence-type=predicted peptide transcript=Glyma.12g004000.2 locus=Glyma.12g004000 id=Glyma.12g004000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MFERSTKLGSVWVTLKRSSLKSKVQRNKLATAGEAIEYRCLIRATDGKKTISTSVGPKDHQRFQASYATILKAHMTALKKRERKDKKKPAEADKREGSSKRPKKS*

>Glyma.12g004000.3.p sequence-type=predicted peptide transcript=Glyma.12g004000.3 locus=Glyma.12g004000 id=Glyma.12g004000.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MFERSTKLGSVWVTLKRSSLKSKVQRNKLATAGEAIEYRCLIRATDGKKTISTSVGPKDHQRFQASYATILKAHMTALKKRERKDKKKPAEADKREGSSKRPKKS*

>Glyma.12g004000.4.p sequence-type=predicted peptide transcript=Glyma.12g004000.4 locus=Glyma.12g004000 id=Glyma.12g004000.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVLLQLDPFLNELTSMFERSTKLGSVWVTLKRSSLKSKVQRNKLATAGEAIEYRCLIRATDGKKTISTSVGPKDHQRFQASYATILKAHMTALKKRERKDKKKPAEADKREGSSKRPKKS*






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