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Report for Sequence Feature Glyma.12g001400

Feature Type:gene_model
Chromosome:Gm12
Start:110454
stop:115131
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.12g001400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G72090.1AT JGI N/AIEA
2.8.4.5EC tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase JGI N/AIEA
GO:0009451GO-bp RNA modification JGI N/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0051536GO-mf iron-sulfur cluster binding JGI N/AIEA
GO:0051539GO-mf 4 iron, 4 sulfur cluster binding JGI N/AIEA
K15865KEGG Transfer RNA biogenesis JGI N/AIEA
PTHR11918PantherFam RADICAL SAM PROTEINS JGI N/AIEA
PTHR11918:SF45PantherFam THREONYLCARBAMOYLADENOSINE TRNA METHYLTHIOTRANSFERASE JGI N/AIEA
PF00919Pfam Uncharacterized protein family UPF0004 JGI N/AIEA
PF04055Pfam Radical SAM superfamily JGI N/AIEA

Gene model name correspondences to Glyma.12g001400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma12g00350 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.12g001400
>Glyma.12g001400.1 sequence-type=CDS polypeptide=Glyma.12g001400.1.p locus=Glyma.12g001400 id=Glyma.12g001400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGGACATTGAGGATTTGCTGATTGGAAGTGCAACTCCACCGGGCTTTCGTTTGCCATTAGCAGCGGCTGTTGGCGTGGGGACAAAGCGGAATCAACTCTCTTCTTCTTCGCTTTCGCCTTCACCTGCAATCCCTGGCACTCAGACTATCTTCATAAAGACCTTTGGCTGCTCTCATAACCAGAGTGACAGTGAATATATGGCTGGTCAGCTTTCTGCTTTTGGCTATTCATTGAGCGATGATCCTGACCATGCAGATCTCTGGCTCATCAACACTTGCACGGTCAAATCCCCAAGTCAATCTGCTATGGATACCATCATATCGAAAGGAAAATCTTCAAATAAACCACTAGTTGTTGCTGGTTGTGTCCCTCAAGGAAGTCGGGATTTGAAAGAGCTCGAAGGAATCAGCATAGTTGGAGTCCAGCAAATCGATCGTGTTGTTGAAATTGTAGAGGAGACTTTAAAAGGTCATGAAGTGCGTCTTTTGACCCGTAAGAAATTGCCAGCACTTGACCTTCCAAAGGTAAGGAAGAACAAGTTTGTTGAGATTCTTCCTATTAATGTTGGTTGTTTAGGTGCTTGCACTTATTGCAAGACAAAGCATGCTCGGGGTCACCTAGGAAGTTACACAATTGATAGCCTTGTTGGGCGTGTAAAATCTGTCATATCTGAAGGGGTTAAAGAGATATGGCTTAGCAGTGAAGACACTGGAGCATATGGTCGTGACATTGGTGTCAATCTTCCAACATTATTGAATGCCTTAGTAGCAGAACTACCAGCTGATGCAAGCACAATGTTGCGTATTGGAATGACTAATCCACCATATATACTTGAACACTTGAAGGAGATTGCTGAGATTTTGCGCCATCCATGTGTTTACTCTTTTCTGCATGTACCGGTTCAATCTGGAAGTGATACCATTTTGAGTGCAATGAATCGAGAATATACTGTGAGCGAGTTCAGGACTGTTGTAGATACTCTAACTGAGCTTGTGCCAGAGATGCAGATTGCCACTGATATAATATGTGGATTTCCTGGTGAAACTGATGAAGATTTTTTGCAAACTATCAACCTTATTAAAGAGTACAAGTTACCTCAAGTTCATATTTCACAATTTTATCCTCGACCAGGGACACCTGCTGCAAGGATGAAAAAGGTTCCAAGTAATGTGGTTAAGAGAAGAAGCCGTGAACTGACAAATGTCTTTGAATCCTTCACACCATACTCTGGGATGGAAGGCAAAGTGGAAAGAATTTGGATTACTGATATTGCATCTGATGGAGTTCACTTGGTTGGTCATACAAAAGGATATATACAAGTTCTTGTACTTGCTCCAGACAATATGCTGGGAACTTCAGCTATGGTTAAGATAACATCCGTGGGAAGGTGGTCAGTTTTTGGGGATGTAATTGAGACAGTGAACCCTGTAAGTGACAATAAAGCTCTAAACAAGCTGGTTCCTAATCAGGATTGCGGTAACTCAGCCAAGACTGGTGGATTTTCAGAAGAGCCAGAATATTGTGCCTGTGGAAATGACATCTGTTGTGGTCAGGGTACTCTCGAAAATAATGATAATTCAAGAGGCAGTGCAGTGCCACAGAACCAAAGCAAAAGAAATTTCATTGGATGGATGCTGAGGAAGCGGGAGCATCTGCACAAAACGGTTGAGAGTGAGCTTGCCTCGGGATCTGTTAAAAAGCAAGAAGGAATCATGAGGAAGTGGGACTTCGTTGATAAGGTTCTTTTGGGTGGAATATCTATCAGCATCTTGACGATTATGGCTCTAGTAGTAGCTGTTATGTTTAGAGTTATTTGGTCCCAATAA
Predicted protein sequences of Glyma.12g001400
>Glyma.12g001400.1.p sequence-type=predicted peptide transcript=Glyma.12g001400.1 locus=Glyma.12g001400 id=Glyma.12g001400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEDIEDLLIGSATPPGFRLPLAAAVGVGTKRNQLSSSSLSPSPAIPGTQTIFIKTFGCSHNQSDSEYMAGQLSAFGYSLSDDPDHADLWLINTCTVKSPSQSAMDTIISKGKSSNKPLVVAGCVPQGSRDLKELEGISIVGVQQIDRVVEIVEETLKGHEVRLLTRKKLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVISEGVKEIWLSSEDTGAYGRDIGVNLPTLLNALVAELPADASTMLRIGMTNPPYILEHLKEIAEILRHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPEMQIATDIICGFPGETDEDFLQTINLIKEYKLPQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTNVFESFTPYSGMEGKVERIWITDIASDGVHLVGHTKGYIQVLVLAPDNMLGTSAMVKITSVGRWSVFGDVIETVNPVSDNKALNKLVPNQDCGNSAKTGGFSEEPEYCACGNDICCGQGTLENNDNSRGSAVPQNQSKRNFIGWMLRKREHLHKTVESELASGSVKKQEGIMRKWDFVDKVLLGGISISILTIMALVVAVMFRVIWSQ*






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