Glyma.12G097200

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Report for Sequence Feature Glyma.12G097200

Feature Type:	gene_model
Chromosome:	Gm12
Start:	8315540
stop:	8316856
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.12G097200

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G05100.1	AT	mitogen-activated protein kinase kinase kinase 18	JGI	N/A	IEA
GO:0006468	GO-bp	protein phosphorylation	EnsemblGenomes	N/A	IEA
GO:0006468	GO-bp	protein phosphorylation	JGI	N/A	IEA
GO:0007346	GO-bp	regulation of mitotic cell cycle	EnsemblGenomes	N/A	IEA
GO:0023014	GO-bp	signal transduction by protein phosphorylation	EnsemblGenomes	N/A	IEA
GO:0031098	GO-bp	stress-activated protein kinase signaling cascade	EnsemblGenomes	N/A	IEA
GO:0032147	GO-bp	activation of protein kinase activity	EnsemblGenomes	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0000166	GO-mf	nucleotide binding	EnsemblGenomes	N/A	IEA
GO:0004672	GO-mf	protein kinase activity	EnsemblGenomes	N/A	IEA
GO:0004672	GO-mf	protein kinase activity	JGI	N/A	IEA
GO:0004674	GO-mf	protein serine/threonine kinase activity	EnsemblGenomes	N/A	IEA
GO:0005524	GO-mf	ATP binding	EnsemblGenomes	N/A	IEA
GO:0005524	GO-mf	ATP binding	JGI	N/A	IEA
KOG0198	KOG	MEKK and related serine/threonine protein kinases	JGI	N/A	IEA
PTHR24361	Panther	MITOGEN-ACTIVATED KINASE KINASE KINASE	JGI	N/A	IEA
PTHR24361:SF58	Panther		JGI	N/A	IEA
PF00069	PFAM	Protein kinase domain	JGI	N/A	IEA

Proteins Associated with Glyma.12G097200

Locus	Gene Symbol	Protein Name
	MAPKKK18-1	mitogen-activated protein kinase kinase 18 gene 1

Expression Patterns of Glyma.12G097200

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.12G097200

Paralog	Evidence	Comments
Glyma.06g307600	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.12G097200 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.12g097200	Wm82.a4.v1	ISS	As supplied by JGI
Glyma12g10370	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.12G097200

Limit To All Plant Sequences

>Glyma.12g097200.1 sequence-type=CDS polypeptide=Glyma.12g097200.1.p locus=Glyma.12g097200 ID=Glyma.12g097200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGTGGCATAGAGGCCACACCATAGGCCAAGGCTCATCAGCCACCGTCTCCACCGCCACGTGCTGCGGTGGTGTCTTGGCTGTCAAGTCATCGGAGCTGCCACAATCAGAGCCTCTGAAAAAGGAGCAGAAAATTTTGTCCTCTCTAAGTAGTCCTTATGTGGTTGCATACAAAGGGTGTGACATTACCATGGAGAACAACAAGCTCTTGTTCAACCTCTTCATGGAGTACATGCCCTTCGGCACGCTTGCTCAGGCGACTCGCCGGTGCGATGGTCGGCTCCAGGAGCCGGCCATTGCATGCTACACAAGGCAAATCGTGCAGGGGCTGGAGTACCTGCATTCAAAAGGGTTGGTGCATTGTGACATCAAGGGTGCCAACATCTTAATTGGTGAAAATGGGGCCAAAATTGGTGACTTGGGGTGTGCCAAGAGTGCGGCGGATTCCACGGGGGCGATCGGCGGCACACCGATGTTCATGGCGCCGGAGGTGGCGCGTGGGGAGGAGCAAGGGTGTGCTAGTGACATTTGGTCACTTGGGTGTACTGTGATTGAAATGGTAACCGGTGGTGCACCATGGCCTAATGTGGAAGACCCTTTTTCAGTGCTTTATCACATTGCATATTCTAGTGAAGTGCCCGAGATTCCTTGTTTTCTATCCAAAGAAGCAAAGGATTTCTTGGGGAAGTGCTTGAGGAGGAATCCACAAGAGAGGTGGAAGGCTAGTGAACTATTGAAGCATCCATTTATTGAGAAATTGTGTTTCAATAAGGAGGTTTTGGAGTCTAATACAAGTTCCCCAACAAGTGTTCTTGAGCAAGGCTATTGGAGTTGTGTGGAAGAGTCAGAGAGTTTAGGCGATTTGATTCACAAAACAAGAAAGTTTGAAACTTTGGCTGCCGGGAGGGTCAGAATGTTGGCTCTGTCTTCTGGGGTGCCCTATTGGGCAAGACATGATGATGAGAATTGGATCACAGCAAGAGGGAATGGGGTTGAAGGTTTTGCCAATTGTGGGGCAGAGACAGCTTCTTCTGCCAGTCATGGGTTGTCTCACTAG

Predicted protein sequences of Glyma.12G097200

Limit To All Plant Sequences

>Glyma.12g097200.1.p sequence-type=predicted peptide transcript=Glyma.12g097200.1 locus=Glyma.12g097200 ID=Glyma.12g097200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEWHRGHTIGQGSSATVSTATCCGGVLAVKSSELPQSEPLKKEQKILSSLSSPYVVAYKGCDITMENNKLLFNLFMEYMPFGTLAQATRRCDGRLQEPAIACYTRQIVQGLEYLHSKGLVHCDIKGANILIGENGAKIGDLGCAKSAADSTGAIGGTPMFMAPEVARGEEQGCASDIWSLGCTVIEMVTGGAPWPNVEDPFSVLYHIAYSSEVPEIPCFLSKEAKDFLGKCLRRNPQERWKASELLKHPFIEKLCFNKEVLESNTSSPTSVLEQGYWSCVEESESLGDLIHKTRKFETLAAGRVRMLALSSGVPYWARHDDENWITARGNGVEGFANCGAETASSASHGLSH*

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