Report for Sequence Feature Glyma.11g216500
Feature Type: gene_model
Chromosome: Gm11
Start: 31083245
stop: 31086253
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.11g216500
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G03450.1 AT
RGA-like 2
JGI N/A IEA
GO:0006351 GO-bp
transcription, DNA-templated
EnsemblGenomes N/A IEA
GO:0006355 GO-bp
regulation of transcription, DNA-templated
EnsemblGenomes N/A IEA
GO:0009723 GO-bp
response to ethylene
EnsemblGenomes N/A IEA
GO:0009737 GO-bp
response to abscisic acid
EnsemblGenomes N/A IEA
GO:0009863 GO-bp
salicylic acid mediated signaling pathway
EnsemblGenomes N/A IEA
GO:0009867 GO-bp
jasmonic acid mediated signaling pathway
EnsemblGenomes N/A IEA
GO:0009938 GO-bp
negative regulation of gibberellic acid mediated signaling pathway
EnsemblGenomes N/A IEA
GO:0010187 GO-bp
negative regulation of seed germination
EnsemblGenomes N/A IEA
GO:0042538 GO-bp
hyperosmotic salinity response
EnsemblGenomes N/A IEA
GO:2000033 GO-bp
regulation of seed dormancy process
EnsemblGenomes N/A IEA
GO:2000377 GO-bp
regulation of reactive oxygen species metabolic process
EnsemblGenomes N/A IEA
GO:0005634 GO-cc
nucleus
EnsemblGenomes N/A IEA
GO:0000989 GO-mf
transcription factor activity, transcription factor binding
EnsemblGenomes N/A IEA
GO:0003700 GO-mf
DNA binding transcription factor activity
EnsemblGenomes N/A IEA
GO:0003712 GO-mf
transcription cofactor activity
EnsemblGenomes N/A IEA
GO:0043565 GO-mf
sequence-specific DNA binding
EnsemblGenomes N/A IEA
PF03514 PFAM
GRAS domain family
JGI N/A IEA
PF12041 PFAM
Transcriptional regulator DELLA protein N terminal
JGI N/A IEA
Proteins Associated with Glyma.11g216500
Locus Gene Symbol Protein Name
GAI2 DELLA protein GAI 2
GR8 giberellic acid responsive gene 8
Expression Patterns of Glyma.11g216500
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.11g216500
Paralog Evidence Comments
Glyma.18g040000 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.11g216500 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma11g33720 Wm82.a1.v1.1 IGC As supplied by JGI
Coding sequences of Glyma.11g216500
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.11g216500.1 sequence-type=CDS polypeptide=Glyma.11g216500.1.p locus=Glyma.11g216500 ID=Glyma.11g216500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGAGGGACCACAAAGATAGCTGCGGCGGCGGCGGCGCCGCCGGAGGGACTGTGAAGGGTGAGTGTTCCTCAATGCAGTCAAACGGGAAGGCGAAGATGTGGGAGGAAGAGCAACAGCAGCAGCAGCAGCAACAACAGCAACAACAACAACAGGGGATGGACGAGTTGCTGGCGGCGTTGGGGTACAAGGTTCGTGCTTCCGACATGGCTGACGTGGCACAGAAGCTGGAGCAGTTGGAGATGGTCATGGGTTGTGCCCAGGAAGACGGAATTTCCCACCTGGCCTCCGACACCGTTCATTACGACCCTACAGATCTCTATTCCTGGGTCCAAAGCATGTTAACCGAACTCAACCCCGAACCCAACAACAACCTCGATCCATCTTCTTTCTTGATCGACAACAACAACAACATCATCAACAGCACAGCCCCTGTTTTCAACGACGATTCCGAATATGACCTCAGAGCCATTCCTGGCATAGCAGCCTACCCTCCTCCTCTTCCTCAAGACAACCACCTCGACGAAATCGAAACGGCTAACAACATCAACAAGCGCCTCAAGCCATCTCCAGCGGAATCAGCAGACTCCGCCGCGTCTGAGCCCACGCGCCATGTCGTCCTCGTTGACCATCAGGAAGCCGGCGTGCGTCTCGTCCACACTCTCCTGGCGTGCGCGGAGGCCGTTCAGCAGGAGAATCTCAAGCTCGCGGACGCGCTCGTCAAGCACGTGGGCATACTCGCGGCTTCCCAAGCCGGCGCCATGAGGAAGGTTGCTTCCTACTTCGCCCAAGCCCTGGCGCGTAGAATCTACGGAATCTTCCCCGAAGAAACCCTCGATTCCTCCTTCTCCGACGTTCTCCACATGCACTTTTACGAGTCTTGCCCTTATCTCAAATTCGCGCACTTCACCGCGAATCAGGCCATCCTCGAAGCCTTCGCCACCGCCGGGAAAGTCCACGTCATCGATTTCGGCCTCAAACAAGGGATGCAGTGGCCGGCACTCATGCAGGCCCTCGCATTACGGCCCGGCGGGCCCCCGACTTTCCGTTTAACCGGAATCGGGCCCCCACAGCCCGACAACACCGACGCGCTGCAGCAGGTGGGCTTGAAATTAGCCCAATTGGCCCAAATCATCGGCGTCCAGTTCGAATTCCGCGGCTTCGTTTGCAACAGCCTCGCGGATCTCGACCCGAATATGCTCGAGATCCGACCCGGGGAAGCCGTGGCGGTGAATTCCGTCTTCGAACTCCACCGCATGCTCGCCCGGTCCGGATCCGTCGACAAGGTCTTGGACACTGTCAAGAAAATTAATCCCCAGATCGTTACCATCGTGGAACAAGAAGCGAACCACAACGGACCGGGTTTTCTAGACCGGTTCACTGAAGCCTTGCATTACTATTCCAGTCTTTTCGACTCGCTTGAGGGTTCGTCTTCTTCTTCGACCGGGTTGGGCTCGCCGAGTCAGGATCTGTTGATGTCCGAGTTGTACCTTGGGAGACAGATTTGCAACGTGGTGGCTTACGAGGGCCCGGACCGGGTCGAGCGGCACGAGACTTTGACTCAGTGGAGGGGGAGATTGGACTCGGCCGGGTTCGACCCGGTTCATCTCGGGTCCAACGCATTCAAGCAAGCGAGTATGCTACTTGCTCTATTCGCAGGCGGTGATGGGTATAGGGTTGAGGAGAATAACGGCTGCCTCATGCTTGGCTGGCACACTAGGCCACTCATCGCTACCTCCGCTTGGAAGCTTCCCTCCTCCAGCGAGTCTAGTGGCTTGACTCAGTGA
Predicted protein sequences of Glyma.11g216500
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.11g216500.1.p sequence-type=predicted peptide transcript=Glyma.11g216500.1 locus=Glyma.11g216500 ID=Glyma.11g216500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKRDHKDSCGGGGAAGGTVKGECSSMQSNGKAKMWEEEQQQQQQQQQQQQQQGMDELLAALGYKVRASDMADVAQKLEQLEMVMGCAQEDGISHLASDTVHYDPTDLYSWVQSMLTELNPEPNNNLDPSSFLIDNNNNIINSTAPVFNDDSEYDLRAIPGIAAYPPPLPQDNHLDEIETANNINKRLKPSPAESADSAASEPTRHVVLVDHQEAGVRLVHTLLACAEAVQQENLKLADALVKHVGILAASQAGAMRKVASYFAQALARRIYGIFPEETLDSSFSDVLHMHFYESCPYLKFAHFTANQAILEAFATAGKVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGLKLAQLAQIIGVQFEFRGFVCNSLADLDPNMLEIRPGEAVAVNSVFELHRMLARSGSVDKVLDTVKKINPQIVTIVEQEANHNGPGFLDRFTEALHYYSSLFDSLEGSSSSSTGLGSPSQDLLMSELYLGRQICNVVAYEGPDRVERHETLTQWRGRLDSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLPSSSESSGLTQ*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
