|
A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G17020.3 | AT | transcription factor-related | JGI | N/A | IEA |
GO:0006281 | GO-bp | DNA repair | EnsemblGenomes | N/A | IEA |
GO:0006289 | GO-bp | nucleotide-excision repair | EnsemblGenomes | N/A | IEA |
GO:0006289 | GO-bp | nucleotide-excision repair | JGI | N/A | IEA |
GO:0006351 | GO-bp | transcription, DNA-templated | EnsemblGenomes | N/A | IEA |
GO:0006355 | GO-bp | regulation of transcription, DNA-templated | EnsemblGenomes | N/A | IEA |
GO:0006974 | GO-bp | cellular response to DNA damage stimulus | EnsemblGenomes | N/A | IEA |
GO:0032508 | GO-bp | DNA duplex unwinding | EnsemblGenomes | N/A | IEA |
GO:0070816 | GO-bp | phosphorylation of RNA polymerase II C-terminal domain | EnsemblGenomes | N/A | IEA |
GO:0000439 | GO-cc | core TFIIH complex | EnsemblGenomes | N/A | IEA |
GO:0000439 | GO-cc | core TFIIH complex | JGI | N/A | IEA |
GO:0005634 | GO-cc | nucleus | EnsemblGenomes | N/A | IEA |
GO:0005634 | GO-cc | nucleus | JGI | N/A | IEA |
GO:0005675 | GO-cc | holo TFIIH complex | EnsemblGenomes | N/A | IEA |
GO:0016020 | GO-cc | membrane | EnsemblGenomes | N/A | IEA |
GO:0016021 | GO-cc | integral component of membrane | EnsemblGenomes | N/A | IEA |
GO:0003690 | GO-mf | double-stranded DNA binding | EnsemblGenomes | N/A | IEA |
GO:0003700 | GO-mf | DNA binding transcription factor activity | EnsemblGenomes | N/A | IEA |
GO:0004003 | GO-mf | ATP-dependent DNA helicase activity | EnsemblGenomes | N/A | IEA |
GO:0004003 | GO-mf | ATP-dependent DNA helicase activity | JGI | N/A | IEA |
GO:0008353 | GO-mf | RNA polymerase II carboxy-terminal domain kinase activity | EnsemblGenomes | N/A | IEA |
PTHR13152 | Panther | TFIIH, POLYPEPTIDE 4 | JGI | N/A | IEA |
PF03849 | PFAM | Transcription factor Tfb2 | JGI | N/A | IEA |
Glyma.11g211200 not represented in the dataset |
Glyma.11g211200 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma13g21803 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.11g211200.1 sequence-type=CDS polypeptide=Glyma.11g211200.1.p locus=Glyma.11g211200 ID=Glyma.11g211200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGTCCGCAAGAAGCGCCGTGACACGAATCTCAAAGTCGGAGCGGACCTCGTGGTTCACCGAGGATAGCACCGAGCGCAATGACTGCCAGAGTACCGCGGCGGCGACGCCGGTGTGCTTCGCGTGGTGGAAAATCCGATCGAAGGAGTTCGCTGCCTTGCGCACGGCGCGCTCTGCGCCCTCATGTAGAGGATTCGTGCCTCTTTCGCTGCGATATAATTTTCTCATGTGCCAATACAGAGACAAAGAAGCTCCAAAATTAACTGAAAGTGGTTTCCAGTTTTTGCTGATGGATACAAATGCACAGCTTTGGTACATTATCAGAGAATATATCTCTAATTCTGAGGTAGCTCTAACTTTTTTTTTAATGATATTTTTTCCATTTGTTTTCTAA
>Glyma.11g211200.1.p sequence-type=predicted peptide transcript=Glyma.11g211200.1 locus=Glyma.11g211200 ID=Glyma.11g211200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MSARSAVTRISKSERTSWFTEDSTERNDCQSTAAATPVCFAWWKIRSKEFAALRTARSAPSCRGFVPLSLRYNFLMCQYRDKEAPKLTESGFQFLLMDTNAQLWYIIREYISNSEVALTFFLMIFFPFVF*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||