Glyma.11g185300

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Report for Sequence Feature Glyma.11g185300

Feature Type:	gene_model
Chromosome:	Gm11
Start:	25389935
stop:	25398374
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.11g185300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G33790.1	AT	Jojoba acyl CoA reductase-related male sterility protein	JGI	N/A	IEA
AT5G22500.1	AT	fatty acid reductase 1	JGI	N/A	IEA
GO:0006629	GO-bp	lipid metabolic process	EnsemblGenomes	N/A	IEA
GO:0010345	GO-bp	suberin biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0035336	GO-bp	long-chain fatty-acyl-CoA metabolic process	EnsemblGenomes	N/A	IEA
GO:0044237	GO-bp	cellular metabolic process	JGI	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	EnsemblGenomes	N/A	IEA
GO:0043231	GO-cc	intracellular membrane-bounded organelle	EnsemblGenomes	N/A	IEA
GO:0003824	GO-mf	catalytic activity	JGI	N/A	IEA
GO:0016491	GO-mf	oxidoreductase activity	EnsemblGenomes	N/A	IEA
GO:0050662	GO-mf	coenzyme binding	JGI	N/A	IEA
GO:0080019	GO-mf	fatty-acyl-CoA reductase (alcohol-forming) activity	EnsemblGenomes	N/A	IEA
GO:0080019	GO-mf	fatty-acyl-CoA reductase (alcohol-forming) activity	JGI	N/A	IEA
GO:0102965	GO-mf	alcohol-forming fatty acyl-CoA reductase activity	EnsemblGenomes	N/A	IEA
KOG1221	KOG	Acyl-CoA reductase	JGI	N/A	IEA
PTHR11011	Panther	MALE STERILITY PROTEIN 2-RELATED	JGI	N/A	IEA
PTHR11011:SF1	Panther		JGI	N/A	IEA
PF03015	PFAM	Male sterility protein	JGI	N/A	IEA
PF07993	PFAM	Male sterility protein	JGI	N/A	IEA
PWY-5884	SoyCyc9	wax esters biosynthesis I	Plant Metabolic Network		ISS
PWY-6733	SoyCyc9	sporopollenin precursors biosynthesis	Plant Metabolic Network		ISS
GN7V-42010	SoyCyc9-rxn	alcohol-forming fatty acyl-CoA reductase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.11g185300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.11g185300 not represented in the dataset	Glyma.11g185300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.11g185300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma11g19190	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.11g185300

Limit To All Plant Sequences

>Glyma.11g185300.2 sequence-type=transcript locus=Glyma.11g185300 ID=Glyma.11g185300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ccatcaaagatagaaagaacaatttaagagaaattagattcaacatccattttacacgtctctcatgaagatagctctacataccaattgttggttctaatttaagaaaaaaaaacataagagaGAAGAAAAAAAAACGTGAGTTTAATTTGGAACAATTGACATAATTTTTTATTGAATAAATTTTATATTTAAATATATTTAAAATAACTGAATAAAAAGATTATACTCAACTATTTTAGGAACTGCTACAATACCAGGAGAATAACTAATTCAAATTAAAAATCAAAACTATCTTGACAGCATCTAAGACATGTTCAACAACAATTATTATTATTACATGAGCTAAAACAATAAATTAAATTTCTTTGTTATTTTGCTCTCTTTGCCTTCCTTATTGCTTTTCGATTCATTATTTTCTTTTCCTTGATCTACTTTGAAGGGATTAAATGTGGTGAGTAAGGTATGTTGCCATTGTTACGATGATTTTCACATGGAAAGTCAACGAAAACTCCAAACATTGATGAAAATAACAAGACTTTATAAACCTTATCTCCTATTTGAGGGCACCTTTGATGACAAGAACGCAGAAATTTTACGGATGGCAAAAAACAAAGCAGGAGATGATCTTGGGAGATTTAACTTTGATCCCAGGAACATTGATTGGATGGACTATGTGTTAAACGCCCACATTCCTGGACTCGTGAAGTATGTTGTTAAGTAAGATGTAATAATATATAGCTCTTATGTTTGCatatatatatatatatatatatatat

Coding sequences of Glyma.11g185300

Limit To All Plant Sequences

>Glyma.11g185300.1 sequence-type=CDS polypeptide=Glyma.11g185300.1.p locus=Glyma.11g185300 ID=Glyma.11g185300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGTTAGCAAGTGTTCACGACTTTCTAAAGGGAAAAACCATTTTAGTTACCGGTGCAACGGGATTCTTAGCAAAACTTTTCGTGGAGAAGATATTAAGGGTTCAACCAAACATAAAGAAGTTATACCTTCTTCTAAGAGCAGAAAATCCTCATATAGCTACCCAACGCTTGCACGATGAGGTTTTGGCGAAGGACTTGTTCAAGGTGGTACGAGAAATGTGGGGTGCAGATTTTGGCTCCTTCATATCCGAGAAAGTGTTGGCTGTTGCTGGCGATGTTTCTCTTGAGAACTTGGGACTTAAAGACCTAAACCTAAGGGAAAAGATGTGGGAAGATATAGATATCATAGTTCACGCTGCTGCTGCTACCAAGTTTGACGAGAGATTTGATATTGCAATGAGCATAAACACGATGGGAGCTCTTCATGCTCTGAACTTCGCTAAGAACTGTAGTAAAATGCAAATTCTTCTCCACTTATCTACTGCTTACGTATGCGGTGAGGCCAAAGGACTAGTACCTGAGGAGCCTTTTCACATGGGTCAGACCCCAAATAGGTCCTCAACATTAGACATCAACGTTGAAAAACTGCTAATTGAGGAAAAAATGGAGGAGCTCCGGGCACAAAATGCTGGTGAACAAACAGCCACATCGGTCATGAAAAACCTTGGAATTATAAGGGCAAATTTACACGGATGGCCAAATGCCTATGTATTTACAAAAGCGATGGGAGAGATGATTTTGTTCAATATGAAAGGTGATGTACCTTTGATCATCGCACGCCCTACTACAGTACTCAGCACTCACTCTGAACCATTCCCCGGTTGGATTGAAGGTGTGAGAACGGTTGATGTTTTTGTTGTCTTGTACGGTAAAGGAAAATTAAGAAGATCGGTTGGTCGTCGGAATACAATTATCGACGCGATACCAGCTGACATGGTGATAAATTCCATGATAATAGCATTATTAGAGGCTCAATATTCAAAGAGCCTTTCCAAGACATTGCTTTACCATATTGGTTCTTCGTTGAGAAATCCATTCACAATTTCCGATCTTGAGGATGTAGCCTATCAATACTTCACAAAAAATCCTTTGATCAACAAAAATGGAAAACCCGTGGCTATCTCCAACAAAGTTACGTGGATCTCTAGTATGAGTTCATTTGAAAGATACATGAAGATTCGATACGTGCTACCTCTAATGGGATTAAATGTGGTGAGTAAGGTATGTTGCCATTGTTACGATGATTTTCACATGGAAAGTCAACGAAAACTCCAAACATTGATGAAAATAACAAGACTTTATAAACCTTATCTCCTATTTGAGGGCACCTTTGATGACAAGAACGCAGAAATTTTACGGATGGCAAAAAACAAAGCAGGAGATGATCTTGGGAGATTTAACTTTGATCCCAGGAACATTGATTGGATGGACTATGTGTTAAACGCCCACATTCCTGGACTCGTGAAGTATGTTGTTAAGTAA

>Glyma.11g185300.2 sequence-type=CDS polypeptide=Glyma.11g185300.2.p locus=Glyma.11g185300 ID=Glyma.11g185300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAAGTCAACGAAAACTCCAAACATTGATGAAAATAACAAGACTTTATAAACCTTATCTCCTATTTGAGGGCACCTTTGATGACAAGAACGCAGAAATTTTACGGATGGCAAAAAACAAAGCAGGAGATGATCTTGGGAGATTTAACTTTGATCCCAGGAACATTGATTGGATGGACTATGTGTTAAACGCCCACATTCCTGGACTCGTGAAGTATGTTGTTAAGTAA

Predicted protein sequences of Glyma.11g185300

Limit To All Plant Sequences

>Glyma.11g185300.1.p sequence-type=predicted peptide transcript=Glyma.11g185300.1 locus=Glyma.11g185300 ID=Glyma.11g185300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MELASVHDFLKGKTILVTGATGFLAKLFVEKILRVQPNIKKLYLLLRAENPHIATQRLHDEVLAKDLFKVVREMWGADFGSFISEKVLAVAGDVSLENLGLKDLNLREKMWEDIDIIVHAAAATKFDERFDIAMSINTMGALHALNFAKNCSKMQILLHLSTAYVCGEAKGLVPEEPFHMGQTPNRSSTLDINVEKLLIEEKMEELRAQNAGEQTATSVMKNLGIIRANLHGWPNAYVFTKAMGEMILFNMKGDVPLIIARPTTVLSTHSEPFPGWIEGVRTVDVFVVLYGKGKLRRSVGRRNTIIDAIPADMVINSMIIALLEAQYSKSLSKTLLYHIGSSLRNPFTISDLEDVAYQYFTKNPLINKNGKPVAISNKVTWISSMSSFERYMKIRYVLPLMGLNVVSKVCCHCYDDFHMESQRKLQTLMKITRLYKPYLLFEGTFDDKNAEILRMAKNKAGDDLGRFNFDPRNIDWMDYVLNAHIPGLVKYVVK*

>Glyma.11g185300.2.p sequence-type=predicted peptide transcript=Glyma.11g185300.2 locus=Glyma.11g185300 ID=Glyma.11g185300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MESQRKLQTLMKITRLYKPYLLFEGTFDDKNAEILRMAKNKAGDDLGRFNFDPRNIDWMDYVLNAHIPGLVKYVVK*

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