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Report for Sequence Feature Glyma.11g184600

Feature Type:gene_model
Chromosome:Gm11
Start:25265163
stop:25267323
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.11g184600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G08960.1AT phosphotyrosyl phosphatase activator (PTPA) family protein JGI N/AIEA
GO:0000413GO-bp protein peptidyl-prolyl isomerization EnsemblGenomesN/AIEA
GO:0043085GO-bp positive regulation of catalytic activity EnsemblGenomesN/AIEA
GO:0043666GO-bp regulation of phosphoprotein phosphatase activity EnsemblGenomesN/AIEA
GO:0000159GO-cc protein phosphatase type 2A complex EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0003755GO-mf peptidyl-prolyl cis-trans isomerase activity EnsemblGenomesN/AIEA
GO:0008160GO-mf protein tyrosine phosphatase activator activity EnsemblGenomesN/AIEA
GO:0016853GO-mf isomerase activity EnsemblGenomesN/AIEA
GO:0019211GO-mf phosphatase activator activity EnsemblGenomesN/AIEA
GO:0019211GO-mf phosphatase activator activity JGI N/AIEA
PTHR10012Panther SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B JGI N/AIEA
PF03095PFAM Phosphotyrosyl phosphate activator (PTPA) protein JGI N/AIEA

Expression Patterns of Glyma.11g184600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.11g184600 not represented in the dataset
Glyma.11g184600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.11g184600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma11g19110 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.11g184600
>Glyma.11g184600.1 sequence-type=CDS polypeptide=Glyma.11g184600.1.p locus=Glyma.11g184600 ID=Glyma.11g184600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGGAAGCTGCAATTACAGTACTGCTTGGAGCCTGTTGGGTCCCATGGTGTGTGGGGGCTTGATGATTATCATTTTTTGCCCTTCATATTTGGGTCTTCGCAGTTGATTGATCACAAGTATATGAAGCCCAAGTCCATTCACAATGAGGATATTTTGGAGAATTTCTCTAATGAGTATTTGTACCTTGCTTGCATTGCCTTTGTCAAGAAGGTGAAGAAAGGGGTGTTTGCTGAGCATTCACCCATGTTGGATGATATCAGTGGGGTGCCCAATTGGAACAAGGTGAACACTGGGTTGCTTAAAATGTATAAGGCTGAGGTCTTGGAGAAGGTCCCCATCATGCAGCACTTTCTTTTCGGGTCGATTATTAAGTGGGAATAG
Predicted protein sequences of Glyma.11g184600
>Glyma.11g184600.1.p sequence-type=predicted peptide transcript=Glyma.11g184600.1 locus=Glyma.11g184600 ID=Glyma.11g184600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MRKLQLQYCLEPVGSHGVWGLDDYHFLPFIFGSSQLIDHKYMKPKSIHNEDILENFSNEYLYLACIAFVKKVKKGVFAEHSPMLDDISGVPNWNKVNTGLLKMYKAEVLEKVPIMQHFLFGSIIKWE*






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