Report for Sequence Feature Glyma.11g182400
Feature Type: | gene_model |
Chromosome: | Gm11 |
Start: | 15525684 |
stop: | 15530271 |
Source: | JGI |
Version: | Wm82.a4.v1 |
High confidence: | yes |
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Annotations for Glyma.11g182400
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
AT3G44380.1 | AT |
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JGI | N/A | IEA |
PTHR31852 | PantherFam |
LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY |
JGI | N/A | IEA |
PTHR31852:SF7 | PantherFam |
WHY DOMAIN-CONTAINING PROTEIN |
JGI | N/A | IEA |
PF03168 | Pfam |
Late embryogenesis abundant protein |
JGI | N/A | IEA |
Proteins Associated with Glyma.11g182400
Locus | Gene Symbol | Protein Name |
| LEA2-60 | late embryogenesis abundant 2 gene 60 |
Gene model name correspondences to Glyma.11g182400 Gene Call Version Wm82.a4.v1
Corresponding Name | Annotation Version | Evidence | Comments |
Glyma11g18880 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.11g182400
>Glyma.11g182400.3 sequence-type=CDS polypeptide=Glyma.11g182400.3.p locus=Glyma.11g182400 id=Glyma.11g182400.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACAACAAAAAGTCAAAATGGAGTTGGAGTTCAGCAATAATCGGAGCAGCATCCGCAGTGGCAGCATCAGCCCTAATATCCGCGAAACCCAAGGACCCAACATTTCACCTCATTTCCATAAACTTCACCTCTTTAAAACTCAATTTCCCTCTCTTAGACGCAGAGGTTCTCCTCACGGTCCACGTCACCAACCCTAATATCGCCCCCATCCACTACTCCTCCACTTCCATGTCCATCTTCTACCAAGGTTCTCTTCTCGGCTCGGCTCAGGTTCAAGCCGGCTCCCAGCCGCCCCGCTCCTGCCAGCTCCTCCGCCTCCCCGCACGCCTCCACGCGCTCGAGCTCGCTCACCACGCCACGCGCTTCCTCCACGACGTCGCGCGCCGCGAGATGTTCCTCGACGCCGCGGTTGATATCGCCGGCACCGCCAGGGTCATGTGGTGGGACCATAACTTCAAGGTCCACGTGGACAGCCACGTCACCGTCGATCCCGTGTTTCTCGACGTCATTGATCAGGAAAACACCTCCGAGCTTGAAGTATTCACCGCAGCGGCGTTGGGGAGTGAGCAATGA
>Glyma.11g182400.5 sequence-type=CDS polypeptide=Glyma.11g182400.5.p locus=Glyma.11g182400 id=Glyma.11g182400.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACAACAAAAAGTCAAAATGGAGTTGGAGTTCAGCAATAATCGGAGCAGCATCCGCAGTGGCAGCATCAGCCCTAATATCCGCGAAACCCAAGGACCCAACATTTCACCTCATTTCCATAAACTTCACCTCTTTAAAACTCAATTTCCCTCTCTTAGACGCAGAGGTTCTCCTCACGGTCCACGTCACCAACCCTAATATCGCCCCCATCCACTACTCCTCCACTTCCATGTCCATCTTCTACCAAGGTTCTCTTCTCGGCTCGGCTCAGGTTCAAGCCGGCTCCCAGCCGCCCCGCTCCTGCCAGCTCCTCCGCCTCCCCGCACGCCTCCACGCGCTCGAGCTCGCTCACCACGCCACGCGCTTCCTCCACGACGTCGCGCGCCGCGAGATGTTCCTCGACGCCGCGGTTGATATCGCCGGCACCGCCAGGGTCATGTGGTGGGACCATAACTTCAAGGTCCACGTGGACAGCCACGTCACCGTCGATCCCGTGTTTCTCGACGTCATTGATCAGGAAAACACCTCCGAGCTTGAAGTATTCACCGCAGCGGCGTTGGGGAGTGAGCAATGA
>Glyma.11g182400.6 sequence-type=CDS polypeptide=Glyma.11g182400.6.p locus=Glyma.11g182400 id=Glyma.11g182400.6.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACAACAAAAAGTCAAAATGGAGTTGGAGTTCAGCAATAATCGGAGCAGCATCCGCAGTGGCAGCATCAGCCCTAATATCCGCGAAACCCAAGGACCCAACATTTCACCTCATTTCCATAAACTTCACCTCTTTAAAACTCAATTTCCCTCTCTTAGACGCAGAGGTTCTCCTCACGGTCCACGTCACCAACCCTAATATCGCCCCCATCCACTACTCCTCCACTTCCATGTCCATCTTCTACCAAGGTTCTCTTCTCGGCTCGGCTCAGGTTCAAGCCGGCTCCCAGCCGCCCCGCTCCTGCCAGCTCCTCCGCCTCCCCGCACGCCTCCACGCGCTCGAGCTCGCTCACCACGCCACGCGCTTCCTCCACGACGTCGCGCGCCGCGAGATGTTCCTCGACGCCGCGGTTGATATCGCCGGCACCGCCAGGGTCATGTGGTGGGACCATAACTTCAAGGTCCACGTGGACAGCCACGTCACCGTCGATCCCGTGTTTCTCGACGTCATTGATCAGGAAAACACCTCCGAGCTTGAAGTATTCACCGCAGCGGCGTTGGGGAGTGAGCAATGA
Predicted protein sequences of Glyma.11g182400
>Glyma.11g182400.3.p sequence-type=predicted peptide transcript=Glyma.11g182400.3 locus=Glyma.11g182400 id=Glyma.11g182400.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDNKKSKWSWSSAIIGAASAVAASALISAKPKDPTFHLISINFTSLKLNFPLLDAEVLLTVHVTNPNIAPIHYSSTSMSIFYQGSLLGSAQVQAGSQPPRSCQLLRLPARLHALELAHHATRFLHDVARREMFLDAAVDIAGTARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSELEVFTAAALGSEQ*
>Glyma.11g182400.5.p sequence-type=predicted peptide transcript=Glyma.11g182400.5 locus=Glyma.11g182400 id=Glyma.11g182400.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDNKKSKWSWSSAIIGAASAVAASALISAKPKDPTFHLISINFTSLKLNFPLLDAEVLLTVHVTNPNIAPIHYSSTSMSIFYQGSLLGSAQVQAGSQPPRSCQLLRLPARLHALELAHHATRFLHDVARREMFLDAAVDIAGTARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSELEVFTAAALGSEQ*
>Glyma.11g182400.6.p sequence-type=predicted peptide transcript=Glyma.11g182400.6 locus=Glyma.11g182400 id=Glyma.11g182400.6.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDNKKSKWSWSSAIIGAASAVAASALISAKPKDPTFHLISINFTSLKLNFPLLDAEVLLTVHVTNPNIAPIHYSSTSMSIFYQGSLLGSAQVQAGSQPPRSCQLLRLPARLHALELAHHATRFLHDVARREMFLDAAVDIAGTARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSELEVFTAAALGSEQ*