SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.11g176400

Feature Type:gene_model
Chromosome:Gm11
Start:29956606
stop:29969023
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.11g176400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G47000.1AT JGI N/AIEA
3.2.1.58EC glucan 1,3-beta-glucosidase JGI N/AIEA
GO:0005975GO-bp carbohydrate metabolic process JGI N/AIEA
GO:0004553GO-mf hydrolase activity, hydrolyzing O-glycosyl compounds JGI N/AIEA
K05349KEGG Phenylpropanoid biosynthesis JGI N/AIEA
PTHR30620PantherFam PERIPLASMIC BETA-GLUCOSIDASE-RELATED JGI N/AIEA
PTHR30620:SF33PantherFam BETA-D-GLUCAN EXOHYDROLASE-LIKE PROTEIN-RELATED JGI N/AIEA
PF00933Pfam Glycosyl hydrolase family 3 N terminal domain JGI N/AIEA
PF01915Pfam Glycosyl hydrolase family 3 C-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.11g176400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma11g22940 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.11g176400
>Glyma.11g176400.1 sequence-type=CDS polypeptide=Glyma.11g176400.1.p locus=Glyma.11g176400 id=Glyma.11g176400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTGTGTTCATCATTTGTTTGTTGCTTACAGAAACATAATAACACACTCACTAGTCACTCCCCAACCACCTTCAACCAAGGAGCCATGGCTTGCGTTTACAAGAATCCCGAAGAGCAAATTGAAGCTCGTGTGAAGGACCTTCTTTCTCGCATGACTCTGAGGGAGAAGATTGGTCAGATGACCCAAATTGAGCGCACTGTTGCCACCTCTTCTGCCATTAGAGATCTCTCCATTGGGAGCATACTCAGTTCTGGTGGCAGTGCACCATTTGAAAATGCACTGTCGTCTGATTGGGCTGATATGGTGGATGGCTTTCAAAAATCAGCTCTTCAGTCGCGACTGGGAATACCTCTCATCTATGGGATTGATGCAGTTCATGGTAATAATAGTGTCTATGGCACTACCATATTTCCTCACAATATTGGCCTTGGAGCTACTAGGGACAGCGATTTAGTTCAAAGAATTGGAGCTGCTACAGCACTTGAAGTTAAAGCTTGCGGAATTCACTATAATTTTGCTCCGTGTGTGGCGGTCTTGAATGATCCTAGATGGGGAAGATGCTATGAGTGTTATAGCGAGGATACTGAAATAGTCAGAAAGATGACTTCCATTGTTTCAGGTTTGCAAGGCCAGCCTCCACAAGGACATGAACATGGATACCCTTTTGTAGCTGGAAGGAACAATGTCATTGCCTGTGCCAAGCATTTTGTTGGAGATGGAGGTACTTACAAAGGTGTGAATGAGGGAAATACTATATTATCTTATGAAGACTTAGAGATAATCCACATGGCACCTTACTTAGACTGCATTTCCCAGGGAGTTTCAACCATTATGGCCTCCTATTCTAGCTGGAATGGACGCCAACTCCATGCTGACCATTTTCTTATAACTGAAATCTTGAAAGATAAGCTAGGTTTTAAGGGTTTTGTGATTTCTGACTGGGAAGGACTTGACCGACTGTGCCTGCCTCATGGATCAGATTATCGGTACTGCATCTCCTCTGCTGTCAATGCGGGAATTGACATGGTGATGGTGGCTTTTAGATTCAAAGTTTTCATTGAAGAGTTGACCTCCCTAGTTGAATCAGGGGAAGTACCTATCAGCAGAATTGATGATGCTGTTGAGCGAATTTTGAGAGTAAAGTTCGCTGCTGGTCTTTTCGAATTTCCTTTAAGTGACAGATCTTTGTTAGATATAGTTGGTTGCAAGCCACATAGAGATCTAGCACGTGAAGCAGTTCAGAAGTCCTTGGTTTTGTTGAAAAATGGAAAAGATCCTAGCAAACCTTTTCTTCCATTGACTAAGAATGCTAAGAAAATCCTTGTTGCTGGAACACACGCCAATGATCTTGGATATCAATGTGGAGGTTGGACTAAAACTTGGTATGGAATGAGTGGGCAGATCACAGTTGGGACAACAATTTTGGATGCTGTGCAGGCAACTGTGGGAGCAGAAACAGAAGTTATATATGAGAAATATCCGTCCGAGAACACCATAGAACGCAATGAATTCTCTTTTGCAATTGTAGCTATTGGTGAAGCTCCATATGCCGAGACCTTGGGTGACAATTCAGAGCTTACAATCCCCTTAAATGGAGCAGATATCATAAGCCTAGTTGCTGACAGAATCCCAACTCTTGTTATTCTGATATCTGGAAGACCTTTAGTCTTAGAGCCATTGCTATTGGATAAGATTGATGCTCTTGTTGCTGTTTGGTTGCCAGGAAGTGAAGGAGAGGGAATCACAGATGTTATCTTTGGCAGTCATGGCTTCAAAGGTAAACTACCAGTGACTTGGTTCAGAAGAGTTGAACAGCTTGATCAGCCAGCTGATGCAGTTAATTCATGTGAACCATTATTTCCTCTTGGTTTTGGGCTGGCATATAACTAA

>Glyma.11g176400.2 sequence-type=CDS polypeptide=Glyma.11g176400.2.p locus=Glyma.11g176400 id=Glyma.11g176400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTGCGTTTACAAGAATCCCGAAGAGCAAATTGAAGCTCGTGTGAAGGACCTTCTTTCTCGCATGACTCTGAGGGAGAAGATTGGTCAGATGACCCAAATTGAGCGCACTGTTGCCACCTCTTCTGCCATTAGAGATCTCTCCATTGGGAGCATACTCAGTTCTGGTGGCAGTGCACCATTTGAAAATGCACTGTCGTCTGATTGGGCTGATATGGTGGATGGCTTTCAAAAATCAGCTCTTCAGTCGCGACTGGGAATACCTCTCATCTATGGGATTGATGCAGTTCATGGTAATAATAGTGTCTATGGCACTACCATATTTCCTCACAATATTGGCCTTGGAGCTACTAGGGACAGCGATTTAGTTCAAAGAATTGGAGCTGCTACAGCACTTGAAGTTAAAGCTTGCGGAATTCACTATAATTTTGCTCCGTGTGTGGCGGTCTTGAATGATCCTAGATGGGGAAGATGCTATGAGTGTTATAGCGAGGATACTGAAATAGTCAGAAAGATGACTTCCATTGTTTCAGGTTTGCAAGGCCAGCCTCCACAAGGACATGAACATGGATACCCTTTTGTAGCTGGAAGGAACAATGTCATTGCCTGTGCCAAGCATTTTGTTGGAGATGGAGGTACTTACAAAGGTGTGAATGAGGGAAATACTATATTATCTTATGAAGACTTAGAGATAATCCACATGGCACCTTACTTAGACTGCATTTCCCAGGGAGTTTCAACCATTATGGCCTCCTATTCTAGCTGGAATGGACGCCAACTCCATGCTGACCATTTTCTTATAACTGAAATCTTGAAAGATAAGCTAGGTTTTAAGGGTTTTGTGATTTCTGACTGGGAAGGACTTGACCGACTGTGCCTGCCTCATGGATCAGATTATCGGTACTGCATCTCCTCTGCTGTCAATGCGGGAATTGACATGGTGATGGTGGCTTTTAGATTCAAAGTTTTCATTGAAGAGTTGACCTCCCTAGTTGAATCAGGGGAAGTACCTATCAGCAGAATTGATGATGCTGTTGAGCGAATTTTGAGAGTAAAGTTCGCTGCTGGTCTTTTCGAATTTCCTTTAAGTGACAGATCTTTGTTAGATATAGTTGGTTGCAAGCCACATAGAGATCTAGCACGTGAAGCAGTTCAGAAGTCCTTGGTTTTGTTGAAAAATGGAAAAGATCCTAGCAAACCTTTTCTTCCATTGACTAAGAATGCTAAGAAAATCCTTGTTGCTGGAACACACGCCAATGATCTTGGATATCAATGTGGAGGTTGGACTAAAACTTGGTATGGAATGAGTGGGCAGATCACAGTTGGGACAACAATTTTGGATGCTGTGCAGGCAACTGTGGGAGCAGAAACAGAAGTTATATATGAGAAATATCCGTCCGAGAACACCATAGAACGCAATGAATTCTCTTTTGCAATTGTAGCTATTGGTGAAGCTCCATATGCCGAGACCTTGGGTGACAATTCAGAGCTTACAATCCCCTTAAATGGAGCAGATATCATAAGCCTAGTTGCTGACAGAATCCCAACTCTTGTTATTCTGATATCTGGAAGACCTTTAGTCTTAGAGCCATTGCTATTGGATAAGATTGATGCTCTTGTTGCTGTTTGGTTGCCAGGAAGTGAAGGAGAGGGAATCACAGATGTTATCTTTGGCAGTCATGGCTTCAAAGGTAAACTACCAGTGACTTGGTTCAGAAGAGTTGAACAGCTTGATCAGCCAGCTGATGCAGTTAATTCATGTGAACCATTATTTCCTCTTGGTTTTGGGCTGGCATATAACTAA
Predicted protein sequences of Glyma.11g176400
>Glyma.11g176400.1.p sequence-type=predicted peptide transcript=Glyma.11g176400.1 locus=Glyma.11g176400 id=Glyma.11g176400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLCSSFVCCLQKHNNTLTSHSPTTFNQGAMACVYKNPEEQIEARVKDLLSRMTLREKIGQMTQIERTVATSSAIRDLSIGSILSSGGSAPFENALSSDWADMVDGFQKSALQSRLGIPLIYGIDAVHGNNSVYGTTIFPHNIGLGATRDSDLVQRIGAATALEVKACGIHYNFAPCVAVLNDPRWGRCYECYSEDTEIVRKMTSIVSGLQGQPPQGHEHGYPFVAGRNNVIACAKHFVGDGGTYKGVNEGNTILSYEDLEIIHMAPYLDCISQGVSTIMASYSSWNGRQLHADHFLITEILKDKLGFKGFVISDWEGLDRLCLPHGSDYRYCISSAVNAGIDMVMVAFRFKVFIEELTSLVESGEVPISRIDDAVERILRVKFAAGLFEFPLSDRSLLDIVGCKPHRDLAREAVQKSLVLLKNGKDPSKPFLPLTKNAKKILVAGTHANDLGYQCGGWTKTWYGMSGQITVGTTILDAVQATVGAETEVIYEKYPSENTIERNEFSFAIVAIGEAPYAETLGDNSELTIPLNGADIISLVADRIPTLVILISGRPLVLEPLLLDKIDALVAVWLPGSEGEGITDVIFGSHGFKGKLPVTWFRRVEQLDQPADAVNSCEPLFPLGFGLAYN*

>Glyma.11g176400.2.p sequence-type=predicted peptide transcript=Glyma.11g176400.2 locus=Glyma.11g176400 id=Glyma.11g176400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MACVYKNPEEQIEARVKDLLSRMTLREKIGQMTQIERTVATSSAIRDLSIGSILSSGGSAPFENALSSDWADMVDGFQKSALQSRLGIPLIYGIDAVHGNNSVYGTTIFPHNIGLGATRDSDLVQRIGAATALEVKACGIHYNFAPCVAVLNDPRWGRCYECYSEDTEIVRKMTSIVSGLQGQPPQGHEHGYPFVAGRNNVIACAKHFVGDGGTYKGVNEGNTILSYEDLEIIHMAPYLDCISQGVSTIMASYSSWNGRQLHADHFLITEILKDKLGFKGFVISDWEGLDRLCLPHGSDYRYCISSAVNAGIDMVMVAFRFKVFIEELTSLVESGEVPISRIDDAVERILRVKFAAGLFEFPLSDRSLLDIVGCKPHRDLAREAVQKSLVLLKNGKDPSKPFLPLTKNAKKILVAGTHANDLGYQCGGWTKTWYGMSGQITVGTTILDAVQATVGAETEVIYEKYPSENTIERNEFSFAIVAIGEAPYAETLGDNSELTIPLNGADIISLVADRIPTLVILISGRPLVLEPLLLDKIDALVAVWLPGSEGEGITDVIFGSHGFKGKLPVTWFRRVEQLDQPADAVNSCEPLFPLGFGLAYN*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo