Glyma.11g168600

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Report for Sequence Feature Glyma.11g168600

Feature Type:	gene_model
Chromosome:	Gm11
Start:	17274288
stop:	17278082
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.11g168600

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G58575.1	AT		JGI	N/A	IEA
GO:0005634	GO-cc	nucleus	EnsemblGenomes	N/A	IEA
KOG2612	KOG	Predicted integral membrane protein	JGI	N/A	IEA
PF08209	PFAM	Sgf11 (transcriptional regulation protein)	JGI	N/A	IEA

Expression Patterns of Glyma.11g168600

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.11g168600 not represented in the dataset	Glyma.11g168600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.11g168600 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma11g28420	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.11g168600

Limit To All Plant Sequences

>Glyma.11g168600.2 sequence-type=transcript locus=Glyma.11g168600 ID=Glyma.11g168600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAATAGTTTGAACTCATATTTGAGTATTTACCCTAAATTTTAGTTGTATATGGGTCTTTTATTTGGAGGCAGGGTCAAATAACACAACCCTCATGGGAGGTGCCAATAGTAGACCCCTAAAATTTTCTTTTCTAGCCCAAAAGTTTAGGCTTTTTCGAAATTGTACCCCAGTGGCATTTGAGGGGTTGCTCTGTGAATCACAGAATCTCTGTTAGCACTCTCCTCTCGACGATTCCCTGTGAtctctctctctctttctctctctttctctctcagtcttctctcgctGTGGTTCAGATTTCAGAGCAGGATCCAAAAGCCTTGCTTGGTCAAGACTCATTCATGTCTGTTCCTAATGAGGAAAACTTGTCGTCACATTCCCAGCTTTCTTCTCATTTTTTCTTGGATCTCCTTGATTCCATCATAGTTGATGTGGCATCAGAGTGTCACAGAGTAGCAAGGCTGGGGCTTGATTCTAATTTGGAAGAAGAAGATGAAGAATTGAAGCTATCGGCACAAGCCAGGGTTAGGGTGGCTGATCCTAGTAACAGTAATGAAGCAAATGGCAAGTATGTGGTTGACATATTTGGACAAACCCATCCTCCTGTGGCAAATGAAATATTTGATTGCATGAATTGTGGTCGATCCATCATGGCTGGGAGGTTTGCTCCACATTTGGAGAAGTGCATGGGAAAGGGTAGGAAGGCACGTCTGAAAGTGACAAGAAGCAGCACAGCCGCGCAGAACCGGTGAGGAGCACTCAAATGGGACACTGGAGTCATGAACTAGTTCATGTGTAATGGCTGGAATACAGGATCTCTGTCATACCTTGAACTTGTTTCTTCGCCGGGAGATGTGGCTGAATTTAATTGTGTTTGAAAATAATATTTCAAACATTTTGGACCTAAACATAACAACCATCGTTGCCTACATCCTCGAATTGTTGTCTACCTTAAAAAAAAAAAACTTTGCTTTTTACAGTGAGTTCCATTGTAATTTTATTATGTTTTACTCCTAGTTCCGTTGTAATTTTATTATAATTTTACTATCTGTTAACATATGTATATTGTGTGCAACTATGAACTAGTATTGTTCATGGATGAAAAGATGCTCAGGGTTGAGATGAATAATACACAGACATTTGGGAAAGTGTGTGTGTTAAGATGAAAAAATATGTAGAGTTCGTTTGATTTG

>Glyma.11g168600.3 sequence-type=transcript locus=Glyma.11g168600 ID=Glyma.11g168600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAATAGTTTGAACTCATATTTGAGTATTTACCCTAAATTTTAGTTGTATATGGGTCTTTTATTTGGAGGCAGGGTCAAATAACACAACCCTCATGGGAGGTGCCAATAGTAGACCCCTAAAATTTTCTTTTCTAGCCCAAAAGTTTAGGCTTTTTCGAAATTGTACCCCAGTGGCATTTGAGGGGTTGCTCTGTGAATCACAGAATCTCTGTTAGCACTCTCCTCTCGACGATTCCCTGTGAtctctctctctctttctctctctttctctctcagtcttctctcgctGTGGTTCAGATTTCAGAGCAGGATCCAAAAGCCTTGCTTGGTCAAGACTCATTCATGTCTGTTCCTAATGAGGAAAACTTGTCGTCACATTCCCAGAGAAAGATGGTTCAGTGATGCATGAAGTGGAAAGTCTATCTTGAACTGCCAACCTTTCTATCTGCTCTCATATCTTTCTTTTAGAATGAGGATGGAGGGAATTCTTTCTTCTCATTTTTTCTTGGATCTCCTTGATTCCATCATAGTTGATGTGGCATCAGAGTGTCACAGAGTAGCAAGGCTGGGGCTTGATTCTAATTTGGAAGAAGAAGATGAAGAATTGAAGCTATCGGCACAAGCCAGGGTTAGGGTGGCTGATCCTAGTAACAGTAATGAAGCAAATGGCAAGTATGTGGTTGACATATTTGGACAAACCCATCCTCCTGTGGCAAATGAAATATTTGATTGCATGAATTGTGGTCGATCCATCATGGCTGGGAGGTTTGCTCCACATTTGGAGAAGTGCATGGGAAAGGGTAGGAAGGCACGTCTGAAAGTGACAAGAAGCAGCACAGCCGCGCAGAACCGGTATTCACGAGGCAGTCCTAGTCCTGGTGAGGAGCACTCAAATGGGACACTGGAGTCATGAACTAGTTCATGTGTAATGGCTGGAATACAGGATCTCTGTCATACCTTGAACTTGTTTCTTCGCCGGGAGATGTGGCTGAATTTAATTGTGTTTGAAAATAATATTTCAAACATTTTGGACCTAAACATAACAACCATCGTTGCCTACATCCTCGAATTGTTGTCTACCTTAAAAAAAAAAAACTTTGCTTTTTACAGTGAGTTCCATTGTAATTTTATTATGTTTTACTCCTAGTTCCGTTGTAATTTTATTATAATTTTACTATCTGTTAACATATGTATATTGTGTGCAACTATGAACTAGTATTGTTCATGGATGAAAAGATGCTCAGGGTTGAGATGAATAATACACAGACATTTGGGAAAGTGTGTGTGTTAAGATGAAAAAATATGTAGAGTTCGTTTGATTTG

>Glyma.11g168600.4 sequence-type=transcript locus=Glyma.11g168600 ID=Glyma.11g168600.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAATAGTTTGAACTCATATTTGAGTATTTACCCTAAATTTTAGTTGTATATGGGTCTTTTATTTGGAGGCAGGGTCAAATAACACAACCCTCATGGGAGGTGCCAATAGTAGACCCCTAAAATTTTCTTTTCTAGCCCAAAAGTTTAGGCTTTTTCGAAATTGTACCCCAGTGGCATTTGAGGGGTTGCTCTGTGAATCACAGAATCTCTGTTAGCACTCTCCTCTCGACGATTCCCTGTGAtctctctctctctttctctctctttctctctcagtcttctctcgctGTGGTTCAGATTTCAGAGCAGGATCCAAAAGCCTTGCTTGGTCAAGACTCATTCATGTCTGTTCCTAATGAGGAAAACTTGTCGTCACATTCCCAGAGAAAGATGGTTCAGTGATGCATGAAGTGGAAAGTCTATCTTGAACTGCCAACCTTTCTATCTGCTCTCATATCTTTCTTTTAGAATGAGGATGGAGGGAATTCTTTCTTCTCATTTTTTCTTGGATCTCCTTGATTCCATCATAGTTGATGTGGCATCAGAGTGTCACAGAGTAGCAAGGCTGGGGCTTGATTCTAATTTGGAAGAAGAAGATGAAGAATTGAAGCTATCGGCACAAGCCAGGGTTAGGGTGGCTGATCCTAGTAACAGTAATGAAGCAAATGGCAAGTATGTGGTTGACATATTTGGACAAACCCATCCTCCTGTGGCAAATGAAATATTTGATTGCATGAATTGTGGTCGATCCATCATGGCTGGGAGGTTTGCTCCACATTTGGAGAAGTGCATGGGAAAGGGTAGGAAGGCACGTCTGAAAGTGACAAGAAGCAGCACAGCCGCGCAGAACCGGTGAGGAGCACTCAAATGGGACACTGGAGTCATGAACTAGTTCATGTGTAATGGCTGGAATACAGGATCTCTGTCATACCTTGAACTTGTTTCTTCGCCGGGAGATGTGGCTGAATTTAATTGTGTTTGAAAATAATATTTCAAACATTTTGGACCTAAACATAACAACCATCGTTGCCTACATCCTCGAATTGTTGTCTACCTTAAAAAAAAAAAACTTTGCTTTTTACAGTGAGTTCCATTGTAATTTTATTATGTTTTACTCCTAGTTCCGTTGTAATTTTATTATAATTTTACTATCTGTTAACATATGTATATTGTGTGCAACTATGAACTAGTATTGTTCATGGATGAAAAGATGCTCAGGGTTGAGATGAATAATACACAGACATTTGGGAAAGTGTGTGTGTTAAGATGAAAAAATATGTAGAGTTCGTTTGATTTG

Coding sequences of Glyma.11g168600

Limit To All Plant Sequences

>Glyma.11g168600.1 sequence-type=CDS polypeptide=Glyma.11g168600.1.p locus=Glyma.11g168600 ID=Glyma.11g168600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCTGTTCCTAATGAGGAAAACTTGTCGTCACATTCCCAGCTTTCTTCTCATTTTTTCTTGGATCTCCTTGATTCCATCATAGTTGATGTGGCATCAGAGTGTCACAGAGTAGCAAGGCTGGGGCTTGATTCTAATTTGGAAGAAGAAGATGAAGAATTGAAGCTATCGGCACAAGCCAGGGTTAGGGTGGCTGATCCTAGTAACAGTAATGAAGCAAATGGCAAGTATGTGGTTGACATATTTGGACAAACCCATCCTCCTGTGGCAAATGAAATATTTGATTGCATGAATTGTGGTCGATCCATCATGGCTGGGAGGTTTGCTCCACATTTGGAGAAGTGCATGGGAAAGGGTAGGAAGGCACGTCTGAAAGTGACAAGAAGCAGCACAGCCGCGCAGAACCGGTATTCACGAGGCAGTCCTAGTCCTGGTTCTACATATTCTCCATATTCAAATTACTCTACCAATAGCATGAATCGGTTGGCAAATGGAACCTCCACTTTTGCAGGTGAGGAGCACTCAAATGGGACACTGGAGTCATGA

>Glyma.11g168600.2 sequence-type=CDS polypeptide=Glyma.11g168600.2.p locus=Glyma.11g168600 ID=Glyma.11g168600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCTGTTCCTAATGAGGAAAACTTGTCGTCACATTCCCAGCTTTCTTCTCATTTTTTCTTGGATCTCCTTGATTCCATCATAGTTGATGTGGCATCAGAGTGTCACAGAGTAGCAAGGCTGGGGCTTGATTCTAATTTGGAAGAAGAAGATGAAGAATTGAAGCTATCGGCACAAGCCAGGGTTAGGGTGGCTGATCCTAGTAACAGTAATGAAGCAAATGGCAAGTATGTGGTTGACATATTTGGACAAACCCATCCTCCTGTGGCAAATGAAATATTTGATTGCATGAATTGTGGTCGATCCATCATGGCTGGGAGGTTTGCTCCACATTTGGAGAAGTGCATGGGAAAGGGTAGGAAGGCACGTCTGAAAGTGACAAGAAGCAGCACAGCCGCGCAGAACCGGTGA

>Glyma.11g168600.3 sequence-type=CDS polypeptide=Glyma.11g168600.3.p locus=Glyma.11g168600 ID=Glyma.11g168600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGGATGGAGGGAATTCTTTCTTCTCATTTTTTCTTGGATCTCCTTGATTCCATCATAGTTGATGTGGCATCAGAGTGTCACAGAGTAGCAAGGCTGGGGCTTGATTCTAATTTGGAAGAAGAAGATGAAGAATTGAAGCTATCGGCACAAGCCAGGGTTAGGGTGGCTGATCCTAGTAACAGTAATGAAGCAAATGGCAAGTATGTGGTTGACATATTTGGACAAACCCATCCTCCTGTGGCAAATGAAATATTTGATTGCATGAATTGTGGTCGATCCATCATGGCTGGGAGGTTTGCTCCACATTTGGAGAAGTGCATGGGAAAGGGTAGGAAGGCACGTCTGAAAGTGACAAGAAGCAGCACAGCCGCGCAGAACCGGTATTCACGAGGCAGTCCTAGTCCTGGTGAGGAGCACTCAAATGGGACACTGGAGTCATGA

>Glyma.11g168600.4 sequence-type=CDS polypeptide=Glyma.11g168600.4.p locus=Glyma.11g168600 ID=Glyma.11g168600.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGGATGGAGGGAATTCTTTCTTCTCATTTTTTCTTGGATCTCCTTGATTCCATCATAGTTGATGTGGCATCAGAGTGTCACAGAGTAGCAAGGCTGGGGCTTGATTCTAATTTGGAAGAAGAAGATGAAGAATTGAAGCTATCGGCACAAGCCAGGGTTAGGGTGGCTGATCCTAGTAACAGTAATGAAGCAAATGGCAAGTATGTGGTTGACATATTTGGACAAACCCATCCTCCTGTGGCAAATGAAATATTTGATTGCATGAATTGTGGTCGATCCATCATGGCTGGGAGGTTTGCTCCACATTTGGAGAAGTGCATGGGAAAGGGTAGGAAGGCACGTCTGAAAGTGACAAGAAGCAGCACAGCCGCGCAGAACCGGTGA

Predicted protein sequences of Glyma.11g168600

Limit To All Plant Sequences

>Glyma.11g168600.1.p sequence-type=predicted peptide transcript=Glyma.11g168600.1 locus=Glyma.11g168600 ID=Glyma.11g168600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSVPNEENLSSHSQLSSHFFLDLLDSIIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNSNEANGKYVVDIFGQTHPPVANEIFDCMNCGRSIMAGRFAPHLEKCMGKGRKARLKVTRSSTAAQNRYSRGSPSPGSTYSPYSNYSTNSMNRLANGTSTFAGEEHSNGTLES*

>Glyma.11g168600.2.p sequence-type=predicted peptide transcript=Glyma.11g168600.2 locus=Glyma.11g168600 ID=Glyma.11g168600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSVPNEENLSSHSQLSSHFFLDLLDSIIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNSNEANGKYVVDIFGQTHPPVANEIFDCMNCGRSIMAGRFAPHLEKCMGKGRKARLKVTRSSTAAQNR*

>Glyma.11g168600.3.p sequence-type=predicted peptide transcript=Glyma.11g168600.3 locus=Glyma.11g168600 ID=Glyma.11g168600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MRMEGILSSHFFLDLLDSIIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNSNEANGKYVVDIFGQTHPPVANEIFDCMNCGRSIMAGRFAPHLEKCMGKGRKARLKVTRSSTAAQNRYSRGSPSPGEEHSNGTLES*

>Glyma.11g168600.4.p sequence-type=predicted peptide transcript=Glyma.11g168600.4 locus=Glyma.11g168600 ID=Glyma.11g168600.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MRMEGILSSHFFLDLLDSIIVDVASECHRVARLGLDSNLEEEDEELKLSAQARVRVADPSNSNEANGKYVVDIFGQTHPPVANEIFDCMNCGRSIMAGRFAPHLEKCMGKGRKARLKVTRSSTAAQNR*

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