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Report for Sequence Feature Glyma.11g168300

Feature Type:gene_model
Chromosome:Gm11
Start:17260913
stop:17262473
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.11g168300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G65140.1AT Haloacid dehalogenase-like hydrolase (HAD) superfamily protein JGI N/AIEA
GO:0005992GO-bp trehalose biosynthetic process EnsemblGenomesN/AIEA
GO:0005992GO-bp trehalose biosynthetic process JGI N/AIEA
GO:0016311GO-bp dephosphorylation EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0004805GO-mf trehalose-phosphatase activity EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
PTHR10788Panther TREHALOSE-6-PHOSPHATE SYNTHASE JGI N/AIEA
PF02358PFAM Trehalose-phosphatase JGI N/AIEA
TRESYN-PWYSoyCyc9 trehalose biosynthesis I Plant Metabolic Network ISS
GN7V-40552SoyCyc9-rxn trehalose-phosphatase Plant Metabolic Network ISS

Expression Patterns of Glyma.11g168300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.11g168300 not represented in the dataset
Glyma.11g168300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.11g168300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma11g28440 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.11g168300
>Glyma.11g168300.1 sequence-type=CDS polypeptide=Glyma.11g168300.1.p locus=Glyma.11g168300 ID=Glyma.11g168300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCCAAATTTTGCTGCACTCAGTTAGGTGTCAGTCTTTCCACAATATATAGTGCCAAAGGAAAGCAAATTATAGTTTTTCTTGACTACGATGGAACTCTCTCTCCAATTGTTGCAGATCTAGATAAGGCTTTCATGACTAGAAAGACGAGAGCAACACTAAAGGGTATAGCAAGACATTTTCCCATAGCAATCGTGATCGGAAGGTGCAGAGACAAGGTATATAACTTTGTAAAATTGGCAGAACTTGGCATGGACATCACTGGTCCAACAAAAAGTCCAAAATCAACAGTGCTGTTCCAATCCACGAGTCAATTCCTGCCAATGATCGATGAGGTGTACAAGATCTTGTTAGAAAAAATGAAGACTGTCCCAGGGGCCCTAAGGTTGAGAACAATAAGTTTTAGTTGGGCAGCGTTGGCGGAGAAAGTTAGATTGGTGCTCAATGAGTATCCACAACTCAGGCTAACCCAAGGGAGAAAAGTGCTAGAGATCCATCCAACCATCAAATGGGACAAGGGCAAGGCTCTTGAATTTTTGTTAGAATCATTAGGGTACAAGAATTTGAATGATATATTTCCAATCTATATTGGTGATGATCGAACTGATGAGGATGCTTTTAGGGTTTTGCGCAGTAGGGGTTAA
Predicted protein sequences of Glyma.11g168300
>Glyma.11g168300.1.p sequence-type=predicted peptide transcript=Glyma.11g168300.1 locus=Glyma.11g168300 ID=Glyma.11g168300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSKFCCTQLGVSLSTIYSAKGKQIIVFLDYDGTLSPIVADLDKAFMTRKTRATLKGIARHFPIAIVIGRCRDKVYNFVKLAELGMDITGPTKSPKSTVLFQSTSQFLPMIDEVYKILLEKMKTVPGALRLRTISFSWAALAEKVRLVLNEYPQLRLTQGRKVLEIHPTIKWDKGKALEFLLESLGYKNLNDIFPIYIGDDRTDEDAFRVLRSRG*






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