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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT3G12270.1 | AT | protein arginine methyltransferase 3 | JGI | N/A | IEA |
| GO:0006355 | GO-bp | regulation of transcription, DNA-templated | EnsemblGenomes | N/A | IEA |
| GO:0006479 | GO-bp | protein methylation | EnsemblGenomes | N/A | IEA |
| GO:0006479 | GO-bp | protein methylation | JGI | N/A | IEA |
| GO:0008152 | GO-bp | metabolic process | JGI | N/A | IEA |
| GO:0019919 | GO-bp | peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | EnsemblGenomes | N/A | IEA |
| GO:0032259 | GO-bp | methylation | EnsemblGenomes | N/A | IEA |
| GO:0034969 | GO-bp | histone arginine methylation | EnsemblGenomes | N/A | IEA |
| GO:0005737 | GO-cc | cytoplasm | JGI | N/A | IEA |
| GO:0005829 | GO-cc | cytosol | EnsemblGenomes | N/A | IEA |
| GO:0008168 | GO-mf | methyltransferase activity | EnsemblGenomes | N/A | IEA |
| GO:0008168 | GO-mf | methyltransferase activity | JGI | N/A | IEA |
| GO:0008276 | GO-mf | protein methyltransferase activity | JGI | N/A | IEA |
| GO:0008469 | GO-mf | histone-arginine N-methyltransferase activity | EnsemblGenomes | N/A | IEA |
| GO:0016740 | GO-mf | transferase activity | EnsemblGenomes | N/A | IEA |
| GO:0035242 | GO-mf | protein-arginine omega-N asymmetric methyltransferase activity | EnsemblGenomes | N/A | IEA |
| KOG1499 | KOG | Protein arginine N-methyltransferase PRMT1 and related enzymes | JGI | N/A | IEA |
| PTHR11006 | Panther | PROTEIN ARGININE N-METHYLTRANSFERASE | JGI | N/A | IEA |
| PTHR11006:SF14 | Panther | JGI | N/A | IEA | |
| PF08241 | PFAM | Methyltransferase domain | JGI | N/A | IEA |
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Glyma.11g157700 not represented in the dataset |
Glyma.11g157700 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma11g25780 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.11g157700.1 sequence-type=CDS polypeptide=Glyma.11g157700.1.p locus=Glyma.11g157700 ID=Glyma.11g157700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGCATTCGGCAACTACAAACAAAAGCAACAACAAGAAGAAGAAGAACAAGAACACAGAATGGAAGAAGACGAGGACGAAAGCGAAGAAGAAGAGGAACAATTTTGGGACGATTGGGAAGGAGAAGACGAAGAAGGAGAGCAGCGAGACTCTGAATTCGTGTGTCTCTTCTGTGAATCCCGGTACAGCTCGTGCGGTTCCTTGTTCGACCACTGCGCCTCCCTTCACCGCTTTGATTTCCACGCGATTAGAACAACTCTTAGCTTGGATTTCTATGCCTCCTTCAAGCTCATTAACTTCATCCGCTCTCTGGTGGCAGAGAACAGATGTTGGAGTTGTGGATTAACATGCCAGTCCAACCGTGATCTTCAGAATCATTTGCATGATTTAGTTGACTTTAATGAGATAAAGACTTTGTGGAATGATGATAGGTATCTGATACCTTTCATGGAAGATGATTCACTGTTGTACAGTTTTGGTGATTGTGACGAAGAAGGTGAAGATGAACAAATTACTCCAATTGATGAAGATCTTATAAAGGATCTAATGAACATTGAAGAGAGTATCCATGACGATCAAGATGTTGTGAATAAAATGGTAGTTGATGATGACAAACATGAGATTGCTTCTGTCTCTAATGATCATTTGAACAAGGCTAGTTCTTCAAAGGAACTTATTAATGGGAAGGACTTGTGCTGTGATAAGGATCCAGAAGGACATTTGATGGTTAATTCTCAAAATCACATTGCAAAGCATATTAAGAAGATCAATGAAAGTTATTTTGGCTCTTACAGTTCATTTGGTATCCATCGAGAGATGTTAAGTGACAAGGTGAGAATGGATGCTTATGGCCAAGCAATTTTGAAGAATCCGTCTCTACTAAATAGTGCTGTGGTTATGGATGTAGGTTGTGGAACTGGAATTCTCAGCCTATTTTCAGCAAAAGCTGGTGCTTCAAGGGTTATTGCAGTCGAGGCTAGTGCCAAGATGGCAGCAGTAGCATCTCAGATTGCAAAAGATAATGGTCTTTTGCTGAGTAAAAGCCAAAATGGAGTTGATGGCTTCCAAAAGGGAGTCATAGAAGTGGTTCATGGTATGGTTGAAGAGATTGATAAAACAGTTGAAGTTCAACCTCACAGTGTTGATGTACTGCTAAGTGAATGGATGGGATATTGCCTGCTGTATGAATCCATGCTTGGTTCAGTACTTTATGCACGAGACCGGTGGTTGAAGCCTGGCGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGCCACAAGTCTTCCTTTTTGGGAAAATGTGTGTGATTTTGACATGTCTTGCATTGGGAAGGAGCTTGTCATAGATGCTGCCCGAATTCCTATAGTTGATGTTGTGGACTCTCAAGATTTAGTTACCTGTTCTGCTATTCTTCAGTCCTTTGACTTGGCAACCATGAAGCCTAATGAAGTGGATTTCACTGCAACTGCTACTTTGGAATTGAAACCAAGTTATTCAGGAACATGCTGCTGGTGTTATGGGGTTGTCCTATGGTTTGATACTGGATTTACAAGCAGATTTTGCCAAGAAACACCAGCTGTGTTATCCACATCCCCTTACATGCCAAGAACACATTGGTCACAGACAATCTTAACCTTTCGAGAACCTATTGCAATGGGATTTGGAAAAGGAAACAGGGGTAAACCAGAAGCAATCGGCACTGAGGTGTATCCTGCTACGAAGATTGATTTACGTGTCAGCATTGTGCGTTCTACTGAGCATCGCAGCATTGATATATCTTTAGAAGCTGCTGGTGTTGAACCTGATGGTCAGAAACGTAGTTGGCCTGCTCAGCTTTTTAATCTGCAGTAG
>Glyma.11g157700.1.p sequence-type=predicted peptide transcript=Glyma.11g157700.1 locus=Glyma.11g157700 ID=Glyma.11g157700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MAFGNYKQKQQQEEEEQEHRMEEDEDESEEEEEQFWDDWEGEDEEGEQRDSEFVCLFCESRYSSCGSLFDHCASLHRFDFHAIRTTLSLDFYASFKLINFIRSLVAENRCWSCGLTCQSNRDLQNHLHDLVDFNEIKTLWNDDRYLIPFMEDDSLLYSFGDCDEEGEDEQITPIDEDLIKDLMNIEESIHDDQDVVNKMVVDDDKHEIASVSNDHLNKASSSKELINGKDLCCDKDPEGHLMVNSQNHIAKHIKKINESYFGSYSSFGIHREMLSDKVRMDAYGQAILKNPSLLNSAVVMDVGCGTGILSLFSAKAGASRVIAVEASAKMAAVASQIAKDNGLLLSKSQNGVDGFQKGVIEVVHGMVEEIDKTVEVQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGATSLPFWENVCDFDMSCIGKELVIDAARIPIVDVVDSQDLVTCSAILQSFDLATMKPNEVDFTATATLELKPSYSGTCCWCYGVVLWFDTGFTSRFCQETPAVLSTSPYMPRTHWSQTILTFREPIAMGFGKGNRGKPEAIGTEVYPATKIDLRVSIVRSTEHRSIDISLEAAGVEPDGQKRSWPAQLFNLQ*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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