SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.11g154900

Feature Type:gene_model
Chromosome:Gm11
Start:18848913
stop:18849542
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.11g154900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
GO:0005199GO-mf structural constituent of cell wall JGI N/AIEA
PF02095Pfam Extensin-like protein repeat JGI N/AIEA

Proteins Associated with Glyma.11g154900
LocusGene SymbolProtein Name
PRP3 repetitive proline-rich cell wall protein 3

Gene model name correspondences to Glyma.11g154900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma11g21616 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.11g154900
>Glyma.11g154900.1 sequence-type=CDS polypeptide=Glyma.11g154900.1.p locus=Glyma.11g154900 id=Glyma.11g154900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCCTTTGTATCCTTCCTAGTGCTGCTTCTTGCAGCCCTTATCCTCATGCCTCAAGGGCTTGCTACTTACTACAAACCAATTAAGAAGCCACCAGTGTACAAGCCTCCAGTGTACAAGCCACCAGTGTACAAACCACCGGTTTATAAGCCAAAACCACCGGTTTACAAGCCGAAACCACCGGTTTACAAGCCACCATATAAGAAGCCACCATACAAGAAACCACCTTATGGAAAGTACCCTCCAGTAGAGGACAACACCCATGCCTAA
Predicted protein sequences of Glyma.11g154900
>Glyma.11g154900.1.p sequence-type=predicted peptide transcript=Glyma.11g154900.1 locus=Glyma.11g154900 id=Glyma.11g154900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASFVSFLVLLLAALILMPQGLATYYKPIKKPPVYKPPVYKPPVYKPPVYKPKPPVYKPKPPVYKPPYKKPPYKKPPYGKYPPVEDNTHA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo