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Report for Sequence Feature Glyma.11g154500

Feature Type:gene_model
Chromosome:Gm11
Start:18709238
stop:18714272
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.11g154500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G54490.1AT RPB5E JGI N/AIEA
2.7.7.6EC DNA-directed RNA polymerase JGI N/AIEA
GO:0006351GO-bp transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003899GO-mf DNA-directed 5'-3' RNA polymerase activity JGI N/AIEA
K03013KEGG DNA repair and recombination proteins JGI N/AIEA
KOG3218 KOG RNA polymerase, 25-kDa subunit (common to polymerases I, II and III) JGI N/AIEA
PTHR10535PantherFam DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 JGI N/AIEA
PF01191Pfam RNA polymerase Rpb5, C-terminal domain JGI N/AIEA
PF03871Pfam RNA polymerase Rpb5, N-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.11g154500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma11g21565 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.11g154500
>Glyma.11g154500.1 sequence-type=CDS polypeptide=Glyma.11g154500.1.p locus=Glyma.11g154500 id=Glyma.11g154500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAATGCATCGCCAAGATGACGAAAGACAACGGGAGCATGGAGAGCCTCCGCTACTTCCTGAGTCGTCGAACGCTGCTGGAGATGCTCCAAGACAGAGGCTACGACGTCGTTCAGCACGCAAACCTCTCTCCCTCCCTCGCCGAGTTCCGCTCCCGCTTCGGCCAAAACCCCAACCCTCAAACCCTCGCCTTCTGCGTTTCGCATCTCTCAAATCCCTCCAACACGGTACAAGTTGTGTTTGCGGGAACCGATGATATAAGAAAAGGAACGGTGAATGAGATATGCACCCAGATTGCGGACAAGGGACGCTTGAAAGGGCTGATACTTGTTGTGCAGAGTAAGATGACTTCGTTTGCGAAAAAAGACTTGGAGAGCTTGCCATTTAAAGTTGAGATTATCAGAATTGATGATTTGCTGGTCAATATCACAAAGCATGTGCTGCAGCCAAAGTATGAGATACTCACTGATGATGAGAAGAAAGCACTGCTCACCAAGCATAATTTGGATGAGAAGCAGCTCCCTCACATGTTGAAGACTGATGCCATAGCTAGTTACTATGGGCTGGAGAAAGGGCAAGTTGTGAAAATCACTCACAGGGGTCCAGTGGTTGATTTTCATGTTTCTTATCGCTGTGTCGTGTAA

>Glyma.11g154500.2 sequence-type=CDS polypeptide=Glyma.11g154500.2.p locus=Glyma.11g154500 id=Glyma.11g154500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAATGCATCGCCAAGATGACGAAAGACAACGGGAGCATGGAGAGCCTCCGCTACTTCCTGAGTCGTCGAACGCTGCTGGAGATGCTCCAAGACAGAGGCTACGACGTCGTTCAGCACGCAAACCTCTCTCCCTCCCTCGCCGAGTTCCGCTCCCGCTTCGGCCAAAACCCCAACCCTCAAACCCTCGCCTTCTGCGTTTCGCATCTCTCAAATCCCTCCAACACGGTACAAGTTGTGTTTGCGGGAACCGATGATATAAGAAAAGGAACGGTGAATGAGATATGCACCCAGATTGCGGACAAGGGACGCTTGAAAGGGCTGATACTTGTTGTGCAGAGTAAGATGACTTCGTTTGCGAAAAAAGACTTGGAGAGCTTGCCATTTAAAGTTGAGATTATCAGAATTGATGATTTGCTGGTCAATATCACAAAGCATGTGCTGCAGCCAAAGTATGAGATACTCACTGATGATGAGAAGAAAGCACTGCTCACCAAGCATAATTTGGATGAGAAGCAGCTCCCTCACATGTTGAAGACTGATGCCATAGCTAGTTACTATGGGCTGGAGAAAGGGCAAGTTGTGAAAATCACTCACAGGGGTCCAGTGGTTGATTTTCATGTTTCTTATCGCTGTGTCGTGTAA

>Glyma.11g154500.3 sequence-type=CDS polypeptide=Glyma.11g154500.3.p locus=Glyma.11g154500 id=Glyma.11g154500.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAATGCATCGCCAAGATGACGAAAGACAACGGGAGCATGGAGAGCCTCCGCTACTTCCTGAGTCGTCGAACGCTGCTGGAGATGCTCCAAGACAGAGGCTACGACGTCGTTCAGCACGCAAACCTCTCTCCCTCCCTCGCCGAGTTCCGCTCCCGCTTCGGCCAAAACCCCAACCCTCAAACCCTCGCCTTCTGCGTTTCGCATCTCTCAAATCCCTCCAACACGGTACAAGTTGTGTTTGCGGGAACCGATGATATAAGAAAAGGAACGGTGAATGAGATATGCACCCAGATTGCGGACAAGGGACGCTTGAAAGGGCTGATACTTGTTGTGCAGAGTAAGATGACTTCGTTTGCGAAAAAAGACTTGGAGAGCTTGCCATTTAAAGTTGAGATTATCAGAATTGATGATTTGCTGGTCAATATCACAAAGCATGTGCTGCAGCCAAAGTATGAGATACTCACTGATGATGAGAAGAAAGCACTGCTCACCAAGCATAATTTGGATGAGAAGCAGCTCCCTCACATGTTGAAGACTGATGCCATAGCTAGTTACTATGGGCTGGAGAAAGGGCAAGTTGTGAAAATCACTCACAGGGGTCCAGTGGTTGATTTTCATGTTTCTTATCGCTGTGTCGTGTAA
Predicted protein sequences of Glyma.11g154500
>Glyma.11g154500.1.p sequence-type=predicted peptide transcript=Glyma.11g154500.1 locus=Glyma.11g154500 id=Glyma.11g154500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MECIAKMTKDNGSMESLRYFLSRRTLLEMLQDRGYDVVQHANLSPSLAEFRSRFGQNPNPQTLAFCVSHLSNPSNTVQVVFAGTDDIRKGTVNEICTQIADKGRLKGLILVVQSKMTSFAKKDLESLPFKVEIIRIDDLLVNITKHVLQPKYEILTDDEKKALLTKHNLDEKQLPHMLKTDAIASYYGLEKGQVVKITHRGPVVDFHVSYRCVV*

>Glyma.11g154500.2.p sequence-type=predicted peptide transcript=Glyma.11g154500.2 locus=Glyma.11g154500 id=Glyma.11g154500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MECIAKMTKDNGSMESLRYFLSRRTLLEMLQDRGYDVVQHANLSPSLAEFRSRFGQNPNPQTLAFCVSHLSNPSNTVQVVFAGTDDIRKGTVNEICTQIADKGRLKGLILVVQSKMTSFAKKDLESLPFKVEIIRIDDLLVNITKHVLQPKYEILTDDEKKALLTKHNLDEKQLPHMLKTDAIASYYGLEKGQVVKITHRGPVVDFHVSYRCVV*

>Glyma.11g154500.3.p sequence-type=predicted peptide transcript=Glyma.11g154500.3 locus=Glyma.11g154500 id=Glyma.11g154500.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MECIAKMTKDNGSMESLRYFLSRRTLLEMLQDRGYDVVQHANLSPSLAEFRSRFGQNPNPQTLAFCVSHLSNPSNTVQVVFAGTDDIRKGTVNEICTQIADKGRLKGLILVVQSKMTSFAKKDLESLPFKVEIIRIDDLLVNITKHVLQPKYEILTDDEKKALLTKHNLDEKQLPHMLKTDAIASYYGLEKGQVVKITHRGPVVDFHVSYRCVV*






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