Glyma.11g130400

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Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.11g130400

Feature Type:	gene_model
Chromosome:	Gm11
Start:	9946082
stop:	9949229
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.11g130400

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G57880.1	AT	Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein	JGI	N/A	IEA
GO:0016020	GO-cc	membrane	EnsemblGenomes	N/A	IEA
GO:0016021	GO-cc	integral component of membrane	EnsemblGenomes	N/A	IEA
GO:0005515	GO-mf	protein binding	JGI	N/A	IEA
PTHR10024	Panther	SYNAPTOTAGMIN	JGI	N/A	IEA
PTHR10024:SF97	Panther	SYNAPTOTAGMIN-7	JGI	N/A	IEA
PF00168	PFAM	C2 domain	JGI	N/A	IEA
PF08372	PFAM	Plant phosphoribosyltransferase C-terminal	JGI	N/A	IEA

Proteins Associated with Glyma.11g130400

Locus	Gene Symbol	Protein Name
	C2-111	C2 domain containing protein gene 111

Expression Patterns of Glyma.11g130400

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.11g130400 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma11g13890	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.11g130400

Limit To All Plant Sequences

>Glyma.11g130400.2 sequence-type=transcript locus=Glyma.11g130400 ID=Glyma.11g130400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TACTTGTCTGAGATACATGTAAGATTTTCGTTTACTTTTCTATGCATAGGTGCACATTTCAATGCTTCTGCTTAGTGCTTTCACCTTGAGGAAGGAAGCCACCCACAACCACAACCAGTGACGCTTGAGTTAACTGATAACTCTCTTTAGAGAAGAAAATGCAGAAGGCACCACTTGCACATTCCAATGAGTTTGCCTTGAAGGAGACCTCTCCCAAGATTGGTGCAGGGGCAGTAACAAGAGACAAGCTATCATGCACCTATGACCTTGTTGAACAGATGCAGTATCTCTATGTTCGTGTGGTCAAAGCCAAGGATTTACCTTCAAAAGATGTCACTGGAAGTCTCGATCCCTATGTTGAAGTGAAGCTTGGAAACTACAAGGGACTCACCAAGCACTTTGAGAAGAAGTCCAACCCTGAGTGGAATCAGGTCTTTGCATTCTCCAAAGACCGGATTCAAGCCTCGGTGTTGGAGGTTATTGTCAAGGATAAGGATGTTATTTCAGATGATTTTGTAGGGAGGATGTGGTTTGATCTCAATGAGATCCCAAAACGTGTTCCCCCAGATAGTCCATTGGCTCCACAATGGTACAGATTGGAAGATCGAAAGGGCGAAAAGGTGAAAGGAGAGATAATGCTTGCAGTTTGGATGGGGACTCAAGCAGATGAGGCATTTCCTGATTCTTGGCATTCTGATGCAGCAATGGTTGGCTCTGAAGCAGTTTCAAACATAAGGTCAAAAGTTTACCTCTCTCCCAAGCTTTGGTATGTCAGGGTCAATGTGATTGAAGCACAGGACTTGATACCAGGTGATAAAACCCGGTTTCCTGAAGTTTATGTGAAGATTAATCTAGGAAACCAGTTTTTAAGGACTAGAGTGTCTCAAAGTAAGACCATGAATCCCATGTGGAATGAGGACTTGATGTTGGTTGCTGCTGAGCCTTTTGAGGAGCCTTTGATTCTGAGTGTGGAAGACAGGCTTGGACCAAACAAAGATGAAGTATTGGGAAGGTGTGTGATCCCTTTGCAGATTGTGCAACGGAGGCTGGACCATAAGCCTGTGAACACTAGGTGGTTTAATCTTGAGAAGCATGTGGTTGTTGAAGGGGAAAAAAAGGAGATTAAATTTGCAAGCAGGATACATTTGAGGATGTGTTTGGATGGTGGTTTCCATGTGTTGGATGAATCAACTCATTATAGTAGTGATCTTAGGCCAACTGCTAAGCAATTATGGAAGCCTAACATTGGAATTCTAGAAGTGGGGATTATAAGTGCACAAGGGCTTATGCCAATGAAAACAAGAGATGGTAGAGGAACCACAGATGCTTATTGTGTGGCAAAATATGGACAAAAGTGGATCCGCACTAGGACTCTTGTGGATAGCTTTACTCCAAAGTGGAATGAGCAGTACACTTGGGAAGTGTTTGATCCATGTACTGTTATTACCATAGGGGTCTTTGACAACGGTCATATACAAGGAGGAGGAGAGAAAGGTGGTGGTGGATCAAAGGATTCTAGGATAGGGAAAGTGAGAATTAGGCTATCCACACTTGAAGCTGATAGAGTTTACACACACTCATATCCTCTTTTAGCACTTCACACTTCAGGTGTGAAGAAAACAGGAGAACTGCAATTGGCTGTGAGGTTCACTAACTCATCTTTCATCAACATGTTGTATTTGTATTCCCAGCCTTTGTTGCCAAAGATGCACTACATCCATCCTCTATCTGTGATTCAGCTAGACAGTCTGAGGCATCAGGCGATGCAGATTGTATCAATGAGGTTGAGTAGAGCTGAGCCACCCCTAAGCAAAGAGGTTGTAGAATACATGCTTGATGTGGATTCACACATGTGGAGTATGAGAAGGAGCAAGGCTAATTTCTTCAGGATAATGAAAGTTCTAAGTGGTTTGGTAGCATTTGGAAGGTGGTTTGATCAGATATGCAATTGGAAAAACCCCATCACCACCATACTAATTCATGTCCTTTTCATAATATTGGTTCTCTACCCTGAGCTAATACTCCCCACAATCTTCTTGTACCTGTTCTTGATTGGAATTTGGAACTTCAGATGGAGGCCTAGACACCCTCCACACATGGACACTAGACTGTCTCATGCTGATGCTGCTCATCCTGATGAACTGGATGAAGAGTTCGACACATTCCCAACTTCGCGGTCATCGGATATCGTTAGGATGAGATACGATCGTTTGAGAAGCATTGCAGGGAGAGTCCAAAGTGTTGTAGGTGACTTAGGTACACAAGGAGAAAGGTTCCAAAGTCTGCTAAGTTGGAGAGATCCAAGGGCTACCACACTCTTCGTCACATTCTGTTTCGTTGCTGCTATAGTTCTCTATGTTACTCCTTTTCAGGTTGTGTCACTTCTCATTGGCTTCTTTATGCTAAGGCACCCCAGATTCCGCCACAAACTTCCATCAGTTCCTCTCAATTTCTTTAGGAGGTTGCCTGCTAGATCAGACAGCATGTTGTAAGCTAAACTTAATTGCTCCTTTTGTCATGAACTTGGTTTAGATAAATCTTCATAAAGTGGGAATATTCATGATGTTGCCGTTATGTTCATTTGTATTCAGTTATTAACAATGAATCTTCATTAGTACCAACTTTCATTTTTTGTATCACTATATAACTGTCACTAGTGTAAGATTAAAATAGCGCTGGTGGCTATATTGCAAACCAAAAGGAACGTTTTTCAGGATTAGCTTTGTCTTTTTTTTTTTTACTTTTAACGGTTGTTGTTGCAAAACCATAGACAAATTGAATTTGTGATGATCACTATCTAAATCTTTTTCCATCTC

Coding sequences of Glyma.11g130400

Limit To All Plant Sequences

>Glyma.11g130400.1 sequence-type=CDS polypeptide=Glyma.11g130400.1.p locus=Glyma.11g130400 ID=Glyma.11g130400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGAAGGCACCACTTGCACATTCCAATGAGTTTGCCTTGAAGGAGACCTCTCCCAAGATTGGTGCAGGGGCAGTAACAAGAGACAAGCTATCATGCACCTATGACCTTGTTGAACAGATGCAGTATCTCTATGTTCGTGTGGTCAAAGCCAAGGATTTACCTTCAAAAGATGTCACTGGAAGTCTCGATCCCTATGTTGAAGTGAAGCTTGGAAACTACAAGGGACTCACCAAGCACTTTGAGAAGAAGTCCAACCCTGAGTGGAATCAGGTCTTTGCATTCTCCAAAGACCGGATTCAAGCCTCGGTGTTGGAGGTTATTGTCAAGGATAAGGATGTTATTTCAGATGATTTTGTAGGGAGGATGTGGTTTGATCTCAATGAGATCCCAAAACGTGTTCCCCCAGATAGTCCATTGGCTCCACAATGGTACAGATTGGAAGATCGAAAGGGCGAAAAGGTGAAAGGAGAGATAATGCTTGCAGTTTGGATGGGGACTCAAGCAGATGAGGCATTTCCTGATTCTTGGCATTCTGATGCAGCAATGGTTGGCTCTGAAGCAGTTTCAAACATAAGGTCAAAAGTTTACCTCTCTCCCAAGCTTTGGTATGTCAGGGTCAATGTGATTGAAGCACAGGACTTGATACCAGGTGATAAAACCCGGTTTCCTGAAGTTTATGTGAAGATTAATCTAGGAAACCAGTTTTTAAGGACTAGAGTGTCTCAAAGTAAGACCATGAATCCCATGTGGAATGAGGACTTGATGTTGGTTGCTGCTGAGCCTTTTGAGGAGCCTTTGATTCTGAGTGTGGAAGACAGGCTTGGACCAAACAAAGATGAAGTATTGGGAAGGTGTGTGATCCCTTTGCAGATTGTGCAACGGAGGCTGGACCATAAGCCTGTGAACACTAGGTGGTTTAATCTTGAGAAGCATGTGGTTGTTGAAGGGGAAAAAAAGGAGATTAAATTTGCAAGCAGGATACATTTGAGGATGTGTTTGGATGGTGGTTTCCATGTGTTGGATGAATCAACTCATTATAGTAGTGATCTTAGGCCAACTGCTAAGCAATTATGGAAGCCTAACATTGGAATTCTAGAAGTGGGGATTATAAGTGCACAAGGGCTTATGCCAATGAAAACAAGAGATGGTAGAGGAACCACAGATGCTTATTGTGTGGCAAAATATGGACAAAAGTGGATCCGCACTAGGACTCTTGTGGATAGCTTTACTCCAAAGTGGAATGAGCAGTACACTTGGGAAGTGTTTGATCCATGTACTGTTATTACCATAGGGGTCTTTGACAACGGTCATATACAAGGAGGAGGAGAGAAAGGTGGTGGTGGATCAAAGGATTCTAGGATAGGGAAAGTGAGAATTAGGCTATCCACACTTGAAGCTGATAGAGTTTACACACACTCATATCCTCTTTTAGCACTTCACACTTCAGGTGTGAAGAAAACAGGAGAACTGCAATTGGCTGTGAGGTTCACTAACTCATCTTTCATCAACATGTTGTATTTGTATTCCCAGCCTTTGTTGCCAAAGATGCACTACATCCATCCTCTATCTGTGATTCAGCTAGACAGTCTGAGGCATCAGGCGATGCAGATTGTATCAATGAGGTTGAGTAGAGCTGAGCCACCCCTAAGCAAAGAGGTTGTAGAATACATGCTTGATGTGGATTCACACATGTGGAGTATGAGAAGGAGCAAGGCTAATTTCTTCAGGATAATGAAAGTTCTAAGTGGTTTGGTAGCATTTGGAAGGTGGTTTGATCAGATATGCAATTGGAAAAACCCCATCACCACCATACTAATTCATGTCCTTTTCATAATATTGGTTCTCTACCCTGAGCTAATACTCCCCACAATCTTCTTGTACCTGTTCTTGATTGGAATTTGGAACTTCAGATGGAGGCCTAGACACCCTCCACACATGGACACTAGACTGTCTCATGCTGATGCTGCTCATCCTGATGAACTGGATGAAGAGTTCGACACATTCCCAACTTCGCGGTCATCGGATATCGTTAGGATGAGATACGATCGTTTGAGAAGCATTGCAGGGAGAGTCCAAAGTGTTGTAGGTGACTTAGGTACACAAGGAGAAAGGTTCCAAAGTCTGCTAAGTTGGAGAGATCCAAGGGCTACCACACTCTTCGTCACATTCTGTTTCGTTGCTGCTATAGTTCTCTATGTTACTCCTTTTCAGGTTGTGTCACTTCTCATTGGCTTCTTTATGCTAAGGCACCCCAGATTCCGCCACAAACTTCCATCAGTTCCTCTCAATTTCTTTAGGAGGTTGCCTGCTAGATCAGACAGCATGTTGTAA

>Glyma.11g130400.2 sequence-type=CDS polypeptide=Glyma.11g130400.2.p locus=Glyma.11g130400 ID=Glyma.11g130400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGAAGGCACCACTTGCACATTCCAATGAGTTTGCCTTGAAGGAGACCTCTCCCAAGATTGGTGCAGGGGCAGTAACAAGAGACAAGCTATCATGCACCTATGACCTTGTTGAACAGATGCAGTATCTCTATGTTCGTGTGGTCAAAGCCAAGGATTTACCTTCAAAAGATGTCACTGGAAGTCTCGATCCCTATGTTGAAGTGAAGCTTGGAAACTACAAGGGACTCACCAAGCACTTTGAGAAGAAGTCCAACCCTGAGTGGAATCAGGTCTTTGCATTCTCCAAAGACCGGATTCAAGCCTCGGTGTTGGAGGTTATTGTCAAGGATAAGGATGTTATTTCAGATGATTTTGTAGGGAGGATGTGGTTTGATCTCAATGAGATCCCAAAACGTGTTCCCCCAGATAGTCCATTGGCTCCACAATGGTACAGATTGGAAGATCGAAAGGGCGAAAAGGTGAAAGGAGAGATAATGCTTGCAGTTTGGATGGGGACTCAAGCAGATGAGGCATTTCCTGATTCTTGGCATTCTGATGCAGCAATGGTTGGCTCTGAAGCAGTTTCAAACATAAGGTCAAAAGTTTACCTCTCTCCCAAGCTTTGGTATGTCAGGGTCAATGTGATTGAAGCACAGGACTTGATACCAGGTGATAAAACCCGGTTTCCTGAAGTTTATGTGAAGATTAATCTAGGAAACCAGTTTTTAAGGACTAGAGTGTCTCAAAGTAAGACCATGAATCCCATGTGGAATGAGGACTTGATGTTGGTTGCTGCTGAGCCTTTTGAGGAGCCTTTGATTCTGAGTGTGGAAGACAGGCTTGGACCAAACAAAGATGAAGTATTGGGAAGGTGTGTGATCCCTTTGCAGATTGTGCAACGGAGGCTGGACCATAAGCCTGTGAACACTAGGTGGTTTAATCTTGAGAAGCATGTGGTTGTTGAAGGGGAAAAAAAGGAGATTAAATTTGCAAGCAGGATACATTTGAGGATGTGTTTGGATGGTGGTTTCCATGTGTTGGATGAATCAACTCATTATAGTAGTGATCTTAGGCCAACTGCTAAGCAATTATGGAAGCCTAACATTGGAATTCTAGAAGTGGGGATTATAAGTGCACAAGGGCTTATGCCAATGAAAACAAGAGATGGTAGAGGAACCACAGATGCTTATTGTGTGGCAAAATATGGACAAAAGTGGATCCGCACTAGGACTCTTGTGGATAGCTTTACTCCAAAGTGGAATGAGCAGTACACTTGGGAAGTGTTTGATCCATGTACTGTTATTACCATAGGGGTCTTTGACAACGGTCATATACAAGGAGGAGGAGAGAAAGGTGGTGGTGGATCAAAGGATTCTAGGATAGGGAAAGTGAGAATTAGGCTATCCACACTTGAAGCTGATAGAGTTTACACACACTCATATCCTCTTTTAGCACTTCACACTTCAGGTGTGAAGAAAACAGGAGAACTGCAATTGGCTGTGAGGTTCACTAACTCATCTTTCATCAACATGTTGTATTTGTATTCCCAGCCTTTGTTGCCAAAGATGCACTACATCCATCCTCTATCTGTGATTCAGCTAGACAGTCTGAGGCATCAGGCGATGCAGATTGTATCAATGAGGTTGAGTAGAGCTGAGCCACCCCTAAGCAAAGAGGTTGTAGAATACATGCTTGATGTGGATTCACACATGTGGAGTATGAGAAGGAGCAAGGCTAATTTCTTCAGGATAATGAAAGTTCTAAGTGGTTTGGTAGCATTTGGAAGGTGGTTTGATCAGATATGCAATTGGAAAAACCCCATCACCACCATACTAATTCATGTCCTTTTCATAATATTGGTTCTCTACCCTGAGCTAATACTCCCCACAATCTTCTTGTACCTGTTCTTGATTGGAATTTGGAACTTCAGATGGAGGCCTAGACACCCTCCACACATGGACACTAGACTGTCTCATGCTGATGCTGCTCATCCTGATGAACTGGATGAAGAGTTCGACACATTCCCAACTTCGCGGTCATCGGATATCGTTAGGATGAGATACGATCGTTTGAGAAGCATTGCAGGGAGAGTCCAAAGTGTTGTAGGTGACTTAGGTACACAAGGAGAAAGGTTCCAAAGTCTGCTAAGTTGGAGAGATCCAAGGGCTACCACACTCTTCGTCACATTCTGTTTCGTTGCTGCTATAGTTCTCTATGTTACTCCTTTTCAGGTTGTGTCACTTCTCATTGGCTTCTTTATGCTAAGGCACCCCAGATTCCGCCACAAACTTCCATCAGTTCCTCTCAATTTCTTTAGGAGGTTGCCTGCTAGATCAGACAGCATGTTGTAA

Predicted protein sequences of Glyma.11g130400

Limit To All Plant Sequences

>Glyma.11g130400.1.p sequence-type=predicted peptide transcript=Glyma.11g130400.1 locus=Glyma.11g130400 ID=Glyma.11g130400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQKAPLAHSNEFALKETSPKIGAGAVTRDKLSCTYDLVEQMQYLYVRVVKAKDLPSKDVTGSLDPYVEVKLGNYKGLTKHFEKKSNPEWNQVFAFSKDRIQASVLEVIVKDKDVISDDFVGRMWFDLNEIPKRVPPDSPLAPQWYRLEDRKGEKVKGEIMLAVWMGTQADEAFPDSWHSDAAMVGSEAVSNIRSKVYLSPKLWYVRVNVIEAQDLIPGDKTRFPEVYVKINLGNQFLRTRVSQSKTMNPMWNEDLMLVAAEPFEEPLILSVEDRLGPNKDEVLGRCVIPLQIVQRRLDHKPVNTRWFNLEKHVVVEGEKKEIKFASRIHLRMCLDGGFHVLDESTHYSSDLRPTAKQLWKPNIGILEVGIISAQGLMPMKTRDGRGTTDAYCVAKYGQKWIRTRTLVDSFTPKWNEQYTWEVFDPCTVITIGVFDNGHIQGGGEKGGGGSKDSRIGKVRIRLSTLEADRVYTHSYPLLALHTSGVKKTGELQLAVRFTNSSFINMLYLYSQPLLPKMHYIHPLSVIQLDSLRHQAMQIVSMRLSRAEPPLSKEVVEYMLDVDSHMWSMRRSKANFFRIMKVLSGLVAFGRWFDQICNWKNPITTILIHVLFIILVLYPELILPTIFLYLFLIGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDTFPTSRSSDIVRMRYDRLRSIAGRVQSVVGDLGTQGERFQSLLSWRDPRATTLFVTFCFVAAIVLYVTPFQVVSLLIGFFMLRHPRFRHKLPSVPLNFFRRLPARSDSML*

>Glyma.11g130400.2.p sequence-type=predicted peptide transcript=Glyma.11g130400.2 locus=Glyma.11g130400 ID=Glyma.11g130400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQKAPLAHSNEFALKETSPKIGAGAVTRDKLSCTYDLVEQMQYLYVRVVKAKDLPSKDVTGSLDPYVEVKLGNYKGLTKHFEKKSNPEWNQVFAFSKDRIQASVLEVIVKDKDVISDDFVGRMWFDLNEIPKRVPPDSPLAPQWYRLEDRKGEKVKGEIMLAVWMGTQADEAFPDSWHSDAAMVGSEAVSNIRSKVYLSPKLWYVRVNVIEAQDLIPGDKTRFPEVYVKINLGNQFLRTRVSQSKTMNPMWNEDLMLVAAEPFEEPLILSVEDRLGPNKDEVLGRCVIPLQIVQRRLDHKPVNTRWFNLEKHVVVEGEKKEIKFASRIHLRMCLDGGFHVLDESTHYSSDLRPTAKQLWKPNIGILEVGIISAQGLMPMKTRDGRGTTDAYCVAKYGQKWIRTRTLVDSFTPKWNEQYTWEVFDPCTVITIGVFDNGHIQGGGEKGGGGSKDSRIGKVRIRLSTLEADRVYTHSYPLLALHTSGVKKTGELQLAVRFTNSSFINMLYLYSQPLLPKMHYIHPLSVIQLDSLRHQAMQIVSMRLSRAEPPLSKEVVEYMLDVDSHMWSMRRSKANFFRIMKVLSGLVAFGRWFDQICNWKNPITTILIHVLFIILVLYPELILPTIFLYLFLIGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDTFPTSRSSDIVRMRYDRLRSIAGRVQSVVGDLGTQGERFQSLLSWRDPRATTLFVTFCFVAAIVLYVTPFQVVSLLIGFFMLRHPRFRHKLPSVPLNFFRRLPARSDSML*

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