Glyma.11g118300

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Report for Sequence Feature Glyma.11g118300

Feature Type:	gene_model
Chromosome:	Gm11
Start:	8986826
stop:	8992141
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.11g118300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G34490.1	AT	cyclase associated protein 1	JGI	N/A	IEA
GO:0000902	GO-bp	cell morphogenesis	EnsemblGenomes	N/A	IEA
GO:0007010	GO-bp	cytoskeleton organization	EnsemblGenomes	N/A	IEA
GO:0007010	GO-bp	cytoskeleton organization	JGI	N/A	IEA
GO:0007163	GO-bp	establishment or maintenance of cell polarity	EnsemblGenomes	N/A	IEA
GO:0007165	GO-bp	signal transduction	EnsemblGenomes	N/A	IEA
GO:0008154	GO-bp	actin polymerization or depolymerization	EnsemblGenomes	N/A	IEA
GO:0045761	GO-bp	regulation of adenylate cyclase activity	EnsemblGenomes	N/A	IEA
GO:0030864	GO-cc	cortical actin cytoskeleton	EnsemblGenomes	N/A	IEA
GO:0003779	GO-mf	actin binding	EnsemblGenomes	N/A	IEA
GO:0003779	GO-mf	actin binding	JGI	N/A	IEA
GO:0008179	GO-mf	adenylate cyclase binding	EnsemblGenomes	N/A	IEA
KOG2675	KOG	Adenylate cyclase-associated protein (CAP/Srv2p)	JGI	N/A	IEA
PTHR10652	Panther	ADENYLYL CYCLASE-ASSOCIATED PROTEIN	JGI	N/A	IEA
PF01213	PFAM	Adenylate cyclase associated (CAP) N terminal	JGI	N/A	IEA
PF08603	PFAM	Adenylate cyclase associated (CAP) C terminal	JGI	N/A	IEA

Expression Patterns of Glyma.11g118300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.11g118300 not represented in the dataset	Glyma.11g118300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.11g118300

Paralog	Evidence	Comments
Glyma.12g043700	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.11g118300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma11g12580	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.11g118300

Limit To All Plant Sequences

>Glyma.11g118300.2 sequence-type=transcript locus=Glyma.11g118300 ID=Glyma.11g118300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TgatggagagaaggcaaacaattcgaggcagaggaagacccaaaaagactataagagagAAGCCTAACCTTGCTGGGTTGTCTGAATTTCTGAAACCATTGAACGAAGTGATCACAAAAGCTACCAAATTGACAGAAGGAAGGAGATCTGATTTTTTTAATCACTTAAAGGCTGCTGCTGATAGTCTCTCGGCTTTAGCATGGATTGCATATACAGGGAAGGATTGTGGTATGAGCATGCCAATTGCGCATGTGGAAGAAAGTTGGCAAATGGCTGAGTTTTACAGCAACAAGGTGCTTGTAGAGTACAGAAACAAAGATCCAAATCATGTTGAGTGGGCCAAAGCTCTTAAAGAGTTGTATCTCCCTGGATTGAGAGATTATGTCAAGAGCTTTCATCCTTTAGGCCCTGTTTGGAGTCCAACAGGAAAAATATTTGCTCCATCAAAAGCTTCTGCTCCTGCTGCACCTCCCCCTCCATCTGCTTCTCTCTTTAGTTCTGAATCATCTCAGGCTTCATCTTCTAAGCCTAAAGAGGGGATGTCTGCTGTTTTTCAACAAATCAGTTCTGGAAATGTCACTTCAGGTTTGAAAAAGGTTACGAATGATATGAAGACTAAGAATCGCACCGATAGAACTGGAGTTGTTGGTGCTATTGAAAAAGAAACTCCGGCAAGTTCACGCGTGTTTTCTAAAGCAGGACCTCCAAAATTTGAACTTCAAATGGGTCGCAAATGGGTTGTTGAGAATCAAATTGAGAAGAAAGACTTGGTGATTGAAGATTGTGATTCAAAGCAGTCTGTATATATTTATGGATGCAAAAACTCTGTTTTGCAAATTTCAGGCAAGGTCAACAATATAACTATTGACAAATGCACAAAGATGGGAGTTGTATTTAAGGATGTTGTTGCAGCATGTGAGATTGTAAACAGTAATGGGGTTGAGGTTCAATGCCAGGGTGCAGCTCCTACAATTTCAGTGGACAACACTTCTGGCTGCCAGCTATATCTGAGTAAAGACTCCTTAGAAGCATCCATAACTACAGCAAAGTCAAGCGAGATCAATGTAATGGTTCCTGGTGCTGATCCGGATGGTGATTGGGTGGAGCATTCTTTGCCACAACAATACATTCATTTGTTCAAGAATGGGCACTTTGAAACGACACCTGCTGCTCATTCTGGAGGTTAAATTGATTGCCAATTTGGAGTTTCTATTCATCTTTAAATCATTTTGGAATACCGTGGGAGTGGCTTCAGTATGTTGTTTCGTTAATTCATTTACAAACACAGTCATATATAGGTTTACCGTATACTTGCTGCTTATGCTTGTGATTTTTCCATGGGTTTATTGAACCATTGGAATCATCCATACGATTTTTTTTAGTAGTTTGCTTCTGGTTGAGCGTCTTTTTGTCCTAAGTTGCATTATGCAATTGGTTTTTTTAGCTTTCAGAGGACCCTTACATTTGTCTGAACATGCTGGTTTGATTCTGGTGCTTTTGCATATTTGAGGATAGAGCAATGATGATGTACTCGGTGCATTCGGAAAGATATTTGTGTATCTGTTTTTTGAATCGATTAGTCCTCCCAGTCTGTAATGAGAAAATGAAACGAGTTGTGGACTTTTTTGGCTTCTGCTTACATGTTGGTCAATCTCTCTCTCTTGAAGAGATGTTGATCAATATCTTATACATGTAATATGATGACAAAACTCAAATTTAATTATAGTATTTATCTGAAAAAA

Coding sequences of Glyma.11g118300

Limit To All Plant Sequences

>Glyma.11g118300.1 sequence-type=CDS polypeptide=Glyma.11g118300.1.p locus=Glyma.11g118300 ID=Glyma.11g118300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACGAGAAGCTCATACAGCGCTTAGAATCTGCGGTGTCGCGCTTGGAGTCGCTATCCGCCGGATTCCACCCCTCCGCCACACAATCCGGCGGCGCCGACGCTCCCGATGCGGCGCTCGATCCCTCCATCGTCGCCTTCGCCGATCTGATCGACCAGTACGTCGGTAGGGTTTCCGGCGCTGCCGAGGTTATCGGTGGTCAAGTCTTGGATGTCACCAAACTGGTGCAGGAAGCTTTCAATGTTCAGAAAGAGCTTCTGATTAAGCTCAGACAGACTCAGAAGCCTAACCTTGCTGGGTTGTCTGAATTTCTGAAACCATTGAACGAAGTGATCACAAAAGCTACCAAATTGACAGAAGGAAGGAGATCTGATTTTTTTAATCACTTAAAGGCTGCTGCTGATAGTCTCTCGGCTTTAGCATGGATTGCATATACAGGGAAGGATTGTGGTATGAGCATGCCAATTGCGCATGTGGAAGAAAGTTGGCAAATGGCTGAGTTTTACAGCAACAAGGTGCTTGTAGAGTACAGAAACAAAGATCCAAATCATGTTGAGTGGGCCAAAGCTCTTAAAGAGTTGTATCTCCCTGGATTGAGAGATTATGTCAAGAGCTTTCATCCTTTAGGCCCTGTTTGGAGTCCAACAGGAAAAATATTTGCTCCATCAAAAGCTTCTGCTCCTGCTGCACCTCCCCCTCCATCTGCTTCTCTCTTTAGTTCTGAATCATCTCAGGCTTCATCTTCTAAGCCTAAAGAGGGGATGTCTGCTGTTTTTCAACAAATCAGTTCTGGAAATGTCACTTCAGGTTTGAAAAAGGTTACGAATGATATGAAGACTAAGAATCGCACCGATAGAACTGGAGTTGTTGGTGCTATTGAAAAAGAAACTCCGGCAAGTTCACGCGTGTTTTCTAAAGCAGGACCTCCAAAATTTGAACTTCAAATGGGTCGCAAATGGGTTGTTGAGAATCAAATTGAGAAGAAAGACTTGGTGATTGAAGATTGTGATTCAAAGCAGTCTGTATATATTTATGGATGCAAAAACTCTGTTTTGCAAATTTCAGGCAAGGTCAACAATATAACTATTGACAAATGCACAAAGATGGGAGTTGTATTTAAGGATGTTGTTGCAGCATGTGAGATTGTAAACAGTAATGGGGTTGAGGTTCAATGCCAGGGTGCAGCTCCTACAATTTCAGTGGACAACACTTCTGGCTGCCAGCTATATCTGAGTAAAGACTCCTTAGAAGCATCCATAACTACAGCAAAGTCAAGCGAGATCAATGTAATGGTTCCTGGTGCTGATCCGGATGGTGATTGGGTGGAGCATTCTTTGCCACAACAATACATTCATTTGTTCAAGAATGGGCACTTTGAAACGACACCTGCTGCTCATTCTGGAGGTTAA

>Glyma.11g118300.2 sequence-type=CDS polypeptide=Glyma.11g118300.2.p locus=Glyma.11g118300 ID=Glyma.11g118300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAGAAGGCAAACAATTCGAGGCAGAGGAAGACCCAAAAAGACTATAAGAGAGAAGCCTAACCTTGCTGGGTTGTCTGAATTTCTGAAACCATTGAACGAAGTGATCACAAAAGCTACCAAATTGACAGAAGGAAGGAGATCTGATTTTTTTAATCACTTAAAGGCTGCTGCTGATAGTCTCTCGGCTTTAGCATGGATTGCATATACAGGGAAGGATTGTGGTATGAGCATGCCAATTGCGCATGTGGAAGAAAGTTGGCAAATGGCTGAGTTTTACAGCAACAAGGTGCTTGTAGAGTACAGAAACAAAGATCCAAATCATGTTGAGTGGGCCAAAGCTCTTAAAGAGTTGTATCTCCCTGGATTGAGAGATTATGTCAAGAGCTTTCATCCTTTAGGCCCTGTTTGGAGTCCAACAGGAAAAATATTTGCTCCATCAAAAGCTTCTGCTCCTGCTGCACCTCCCCCTCCATCTGCTTCTCTCTTTAGTTCTGAATCATCTCAGGCTTCATCTTCTAAGCCTAAAGAGGGGATGTCTGCTGTTTTTCAACAAATCAGTTCTGGAAATGTCACTTCAGGTTTGAAAAAGGTTACGAATGATATGAAGACTAAGAATCGCACCGATAGAACTGGAGTTGTTGGTGCTATTGAAAAAGAAACTCCGGCAAGTTCACGCGTGTTTTCTAAAGCAGGACCTCCAAAATTTGAACTTCAAATGGGTCGCAAATGGGTTGTTGAGAATCAAATTGAGAAGAAAGACTTGGTGATTGAAGATTGTGATTCAAAGCAGTCTGTATATATTTATGGATGCAAAAACTCTGTTTTGCAAATTTCAGGCAAGGTCAACAATATAACTATTGACAAATGCACAAAGATGGGAGTTGTATTTAAGGATGTTGTTGCAGCATGTGAGATTGTAAACAGTAATGGGGTTGAGGTTCAATGCCAGGGTGCAGCTCCTACAATTTCAGTGGACAACACTTCTGGCTGCCAGCTATATCTGAGTAAAGACTCCTTAGAAGCATCCATAACTACAGCAAAGTCAAGCGAGATCAATGTAATGGTTCCTGGTGCTGATCCGGATGGTGATTGGGTGGAGCATTCTTTGCCACAACAATACATTCATTTGTTCAAGAATGGGCACTTTGAAACGACACCTGCTGCTCATTCTGGAGGTTAA

Predicted protein sequences of Glyma.11g118300

Limit To All Plant Sequences

>Glyma.11g118300.1.p sequence-type=predicted peptide transcript=Glyma.11g118300.1 locus=Glyma.11g118300 ID=Glyma.11g118300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDEKLIQRLESAVSRLESLSAGFHPSATQSGGADAPDAALDPSIVAFADLIDQYVGRVSGAAEVIGGQVLDVTKLVQEAFNVQKELLIKLRQTQKPNLAGLSEFLKPLNEVITKATKLTEGRRSDFFNHLKAAADSLSALAWIAYTGKDCGMSMPIAHVEESWQMAEFYSNKVLVEYRNKDPNHVEWAKALKELYLPGLRDYVKSFHPLGPVWSPTGKIFAPSKASAPAAPPPPSASLFSSESSQASSSKPKEGMSAVFQQISSGNVTSGLKKVTNDMKTKNRTDRTGVVGAIEKETPASSRVFSKAGPPKFELQMGRKWVVENQIEKKDLVIEDCDSKQSVYIYGCKNSVLQISGKVNNITIDKCTKMGVVFKDVVAACEIVNSNGVEVQCQGAAPTISVDNTSGCQLYLSKDSLEASITTAKSSEINVMVPGADPDGDWVEHSLPQQYIHLFKNGHFETTPAAHSGG*

>Glyma.11g118300.2.p sequence-type=predicted peptide transcript=Glyma.11g118300.2 locus=Glyma.11g118300 ID=Glyma.11g118300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MERRQTIRGRGRPKKTIREKPNLAGLSEFLKPLNEVITKATKLTEGRRSDFFNHLKAAADSLSALAWIAYTGKDCGMSMPIAHVEESWQMAEFYSNKVLVEYRNKDPNHVEWAKALKELYLPGLRDYVKSFHPLGPVWSPTGKIFAPSKASAPAAPPPPSASLFSSESSQASSSKPKEGMSAVFQQISSGNVTSGLKKVTNDMKTKNRTDRTGVVGAIEKETPASSRVFSKAGPPKFELQMGRKWVVENQIEKKDLVIEDCDSKQSVYIYGCKNSVLQISGKVNNITIDKCTKMGVVFKDVVAACEIVNSNGVEVQCQGAAPTISVDNTSGCQLYLSKDSLEASITTAKSSEINVMVPGADPDGDWVEHSLPQQYIHLFKNGHFETTPAAHSGG*

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