Glyma.11g097400

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Report for Sequence Feature Glyma.11g097400

Feature Type:	gene_model
Chromosome:	Gm11
Start:	7433938
stop:	7438183
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.11g097400

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G38430.1	AT	rho guanyl-nucleotide exchange factor 1	JGI	N/A	IEA
GO:0065009	GO-bp	regulation of molecular function	EnsemblGenomes	N/A	IEA
GO:0005085	GO-mf	guanyl-nucleotide exchange factor activity	EnsemblGenomes	N/A	IEA
GO:0005089	GO-mf	Rho guanyl-nucleotide exchange factor activity	EnsemblGenomes	N/A	IEA
GO:0005089	GO-mf	Rho guanyl-nucleotide exchange factor activity	JGI	N/A	IEA
PF03759	PFAM	PRONE (Plant-specific Rop nucleotide exchanger)	JGI	N/A	IEA

Expression Patterns of Glyma.11g097400

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.11g097400

Paralog	Evidence	Comments
Glyma.12g023400	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.11g097400 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma11g10330	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.11g097400

Limit To All Plant Sequences

>Glyma.11g097400.1 sequence-type=CDS polypeptide=Glyma.11g097400.1.p locus=Glyma.11g097400 ID=Glyma.11g097400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGAGCGTTTCGTCCGAAGATGCTTCAGACCACATGAGCAACCGTTGTGGGAGTTATAGTCTCAGTGCTGATGTCAGCGAGTCGGAGAGCTGCAGCAGCTTCTCCGCCCGCCGCTTCGACGCCGAGGGAGCTTCCAGTTCAGCCAACCTCTCACCGCGCCCCGTCGCTGCTCACTTTAACTTCCCGCCGGCGCAGGTCTTGCTTCCCGTCATTGGCGGCAAAGACGTCTTCGTTTGGGATCACAAGCGTGATCTCGATTTGTCTGAAGTGGAAATGATGAAGGAGAGGTTCGCTAAGCTGCTTCTGGGAGAGGATATGTCTGGTGGTGGAAAAGGGGTGTGTACTGCACTTGCAATCTCCAATGCAATAACCAATCTCTCTGCAACTGTGTTTGGCGAACTGTGGAGGTTAGAGCCGCTGGCGCCACAGAAGAAAGCTATGTGGCGTAGAGAAATGGAGTGGCTGTTATGTGTGAGTGATTCCATTGTGGAGTTAGTGCCATCTGTGCAGCAGTTTCCTGGGGGTGGAACCTATGAGGTGATGGCGACGCGGCCTCGCTCAGATTTGTATATCAATCTTCCGGCTCTGAAGAAGCTTGATGGGATGCTGCTTAGTATGCTTGATGGGTTTCATGACACACAGTTTTGGTATGTTGACCGGGGAATTATATTGGGCGATTCCAAGGATTGTGATGCCTATGGTAGACCTTCGGTTAGGCAAGAGGAGAAATGGTGGCTTCCCTCTCCCAAGCTTCCCCCAAATGGCTTGTCCGAGGAAAGCAGGAAAAGGTTGCAGCAGTGTAGGGATTGCACAAATCAGATTCTAAAAGCTGCTGTGGCAATTAATACTTCTGTTCTTGCTGAAATGGAAATTCCGGGTGCCTACATTGAGTCCTTGCCCAAGAATGGAAAGGCTTGTCTAGGGGATATAATCTATCGATACTTAACGGCAGACCAGTTCTCGCCTGAATGTCTCCTTGATTGCCTGGATCTTTCGTCAGAGCACCACACTCTGGATATAGCTAATAGAATTGAGGCTGCTATACATGTATGGAGGCTGAAGGACCATAAGAAACATCTAAGTTCAGCAAAATCCAGACGGCCTTGGGGTGGAAAGGTGAAGGGACTTGTTGCTGACAGTGAGAAGAACAAGAACAACTTTCTTGCCCAACGGGCAGAGACACTTCTAGAAAGCTTAAAACACCGATTTCCAGGGCTCCCTCAGACTGCACTAGATATGGCCAAAATTCAATATAATAAGGATGTCGGACAGTCTATTCTTGAAAGTTATTCAAGAGTGATGGAGAGCTTGGCCTTTAACATAATGGCCAGGATTGATGATGTCCTATATGTAGACGATAGTATAAAGCGATGCGCAGCTGCAGATTCTCTCTCATTGTTCAGCAGGGGAGGTTTTGGTGGCATGCCCATCCAGAAGCGATTCTCTCCTAGTCCCTTCTCAATTCAACACACCCCATATGCCTCCCCATTTGCAACGCCAACATTCTGTTCCTCCACTCCTGTTACTGGGAGCCCTTGCAGTCCTGCAAGGATACATGATGTGAAAAGGAATGCTCCGAAGGAGGGTGCAGACTCGAAGACAGATAAGTTGGCCACATCTGAGTTTGAGAGGGTTTGGTCATACGCGGGAAACCTCAGTGCAAGAAGAGTGTCTGGCGATGCTCCAGAAAGAGACTGA

Predicted protein sequences of Glyma.11g097400

Limit To All Plant Sequences

>Glyma.11g097400.1.p sequence-type=predicted peptide transcript=Glyma.11g097400.1 locus=Glyma.11g097400 ID=Glyma.11g097400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGSVSSEDASDHMSNRCGSYSLSADVSESESCSSFSARRFDAEGASSSANLSPRPVAAHFNFPPAQVLLPVIGGKDVFVWDHKRDLDLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLLSMLDGFHDTQFWYVDRGIILGDSKDCDAYGRPSVRQEEKWWLPSPKLPPNGLSEESRKRLQQCRDCTNQILKAAVAINTSVLAEMEIPGAYIESLPKNGKACLGDIIYRYLTADQFSPECLLDCLDLSSEHHTLDIANRIEAAIHVWRLKDHKKHLSSAKSRRPWGGKVKGLVADSEKNKNNFLAQRAETLLESLKHRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDSIKRCAAADSLSLFSRGGFGGMPIQKRFSPSPFSIQHTPYASPFATPTFCSSTPVTGSPCSPARIHDVKRNAPKEGADSKTDKLATSEFERVWSYAGNLSARRVSGDAPERD*

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