Glyma.11g089200

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Report for Sequence Feature Glyma.11g089200

Feature Type:	gene_model
Chromosome:	Gm11
Start:	6755132
stop:	6757031
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.11g089200

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G14130.1	AT	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	JGI	N/A	IEA
GO:0009852	GO-bp	auxin catabolic process	EnsemblGenomes	N/A	IEA
PWY-6787	SoyCyc9	flavonoid biosynthesis (in equisetum)	Plant Metabolic Network		ISS
PWY1F-FLAVSYN	SoyCyc9	flavonoid biosynthesis	Plant Metabolic Network		ISS
GN7V-64648	SoyCyc9-rxn	flavanone 3-dioxygenase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.11g089200

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.11g089200 not represented in the dataset	Glyma.11g089200 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.11g089200 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma11g09461	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.11g089200

Limit To All Plant Sequences

>Glyma.11g089200.2 sequence-type=transcript locus=Glyma.11g089200 ID=Glyma.11g089200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACAAGAACAAAAAACAATAGCTAGAGATAGAAGAAGAAATATGGAGGATACTTTTCCAGTGATTGATGCGGAGAAGATTAATTGTGAGGAAGGGGAATGCAAGAAGCTAAGAGAAGCATGTGAAAGATGGGGTTGTTTCATGGCTGACATGAAGAAGGTCGTTGAAGCTCTGGTGGTTACGTGGGACAAAATGCATTCAGCACTTTATATGAGGCCTTGGGTCTCTATGACTTGTGTTCCTCACAAGCTATGCAGATTTTCTGTTCTCAACTTGATGACTCGCTCCACCAGAGTGAACATAGGACAAAAGATGGCTGAATCTCTTGGCCTAGTTGTTGCTGATTTCGAGGACTGGTTATGCGAGTTTAAATTTAACAAATATAAACTTCAACCCAGAAACAATCGGAGTTCCAATACACACAGATTCAGGGTTCTTAACCATTCTCAAAGATGACGAAAATGCTGGTGGTCTTCAAGTGATGAACGGTTCTGGCTCATTTCTGCCAATCCTTCCTTTCCCCGGGACCTTCAATGCAAGGAAGGGAGCAAACGTCTTTCAATTGCTACATTTATGTTGAGGCAACAGGCGAATTGGTGGACCATGATCACCCACGTCTGTATCAAGCTTTTAATTATGAAGATTATAAGGAAACTCAGAGTTAGCAACAAGGGGATGCCCACTAATGAAGCCCTGGAGTTGTTCCGCTTGGCCTAATGATAGGAACTAGGTTAGGACTTAGGAAGGGGAAATGTATGTCTTTGTTTTGCGTAGAAAGGGCAAATTAATGGTCATATTTTAAGTAACCAACAAACTATGCTAAATAACTCGACAAGACTTCCGAGTGAGGAATGAGTGGGTAAACGTTTGAATGAGTATTTAAATGGTAAATTTAACTATATGTGAATTTTTTAAATCTCGA

Coding sequences of Glyma.11g089200

Limit To All Plant Sequences

>Glyma.11g089200.1 sequence-type=CDS polypeptide=Glyma.11g089200.1.p locus=Glyma.11g089200 ID=Glyma.11g089200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGGATACTTTTCCAGTGATTGATGCGGAGAAGATTAATTGTGAGGAAGGGGAATGCAAGAAGCTAAGAGAAGCATGTGAAAGATGGGGTTGTTTCATGGCTGACATGAAGAAGGTCGTTGAAGCTCTGGTGGTTACGTGGGACAAAATGCATTCAGCACTTTATATGAGGCCTTGGGTCTCTATGACTTGTGTTCCTCACAAGCTATGCAGATTTTCTGTTCTCAACTTGATGACTCGCTCCACCAGAGAAACAATCGGAGTTCCAATACACACAGATTCAGGGTTCTTAACCATTCTCAAAGATGACGAAAATGCTGGTGGTCTTCAAGTGATGAACGGTTCTGGCTCATTTCTGCCAATCCTTCCTTTCCCCGGGACCTTCAATGCAAGGAAGGGAGCAAACGTCTTTCAATTGCTACATTTATGTTGA

>Glyma.11g089200.2 sequence-type=CDS polypeptide=Glyma.11g089200.2.p locus=Glyma.11g089200 ID=Glyma.11g089200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGGATACTTTTCCAGTGATTGATGCGGAGAAGATTAATTGTGAGGAAGGGGAATGCAAGAAGCTAAGAGAAGCATGTGAAAGATGGGGTTGTTTCATGGCTGACATGAAGAAGGTCGTTGAAGCTCTGGTGGTTACGTGGGACAAAATGCATTCAGCACTTTATATGAGGCCTTGGGTCTCTATGACTTGTGTTCCTCACAAGCTATGCAGATTTTCTGTTCTCAACTTGATGACTCGCTCCACCAGAGTGAACATAGGACAAAAGATGGCTGAATCTCTTGGCCTAGTTGTTGCTGATTTCGAGGACTGGTTATGCGAGTTTAAATTTAACAAATATAAACTTCAACCCAGAAACAATCGGAGTTCCAATACACACAGATTCAGGGTTCTTAACCATTCTCAAAGATGA

Predicted protein sequences of Glyma.11g089200

Limit To All Plant Sequences

>Glyma.11g089200.1.p sequence-type=predicted peptide transcript=Glyma.11g089200.1 locus=Glyma.11g089200 ID=Glyma.11g089200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEDTFPVIDAEKINCEEGECKKLREACERWGCFMADMKKVVEALVVTWDKMHSALYMRPWVSMTCVPHKLCRFSVLNLMTRSTRETIGVPIHTDSGFLTILKDDENAGGLQVMNGSGSFLPILPFPGTFNARKGANVFQLLHLC*

>Glyma.11g089200.2.p sequence-type=predicted peptide transcript=Glyma.11g089200.2 locus=Glyma.11g089200 ID=Glyma.11g089200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEDTFPVIDAEKINCEEGECKKLREACERWGCFMADMKKVVEALVVTWDKMHSALYMRPWVSMTCVPHKLCRFSVLNLMTRSTRVNIGQKMAESLGLVVADFEDWLCEFKFNKYKLQPRNNRSSNTHRFRVLNHSQR*

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