SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.11g082800

Feature Type:gene_model
Chromosome:Gm11
Start:6213884
stop:6221768
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.11g082800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G49410.1AT JGI N/AIEA
K15202KEGG Transcription machinery JGI N/AIEA
KOG2473 KOG RNA polymerase III transcription factor (TF)IIIC subunit JGI N/AIEA
PTHR13230PantherFam GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5 JGI N/AIEA
PF09734Pfam RNA polymerase III transcription factor (TF)IIIC subunit HTH domain JGI N/AIEA

Gene model name correspondences to Glyma.11g082800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma11g08780 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.11g082800
>Glyma.11g082800.1 sequence-type=CDS polypeptide=Glyma.11g082800.1.p locus=Glyma.11g082800 id=Glyma.11g082800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGAGTGATAAAGGATGGCACAATCTCAGGGGTTCTACCGGAACCTCAAGGATTTATGGTGCACTATCCTGCTTATCCATCATCCATCTCTCGAGCTGTTGATACTCTTGGGGGAATTCAAGCCATCCAGAAGGCTCGCTGTTCCAAATCCAACAAATTAGAGCTTCGTTTCCGTCCTGAAGACCCCTATTCTCACCCTGCATTTGGGGAGCTTCGTCCCACCAACTCTCTGCTTCTCAAAATATCCAAGACAAAACCACCACCACCTGTTCATGATGCCGAAGCTTCTAGCAGCTCTACAAATGGGGAGCAAGACCAAGAGGGAAGTCTTTGTGCTGATATCGTCGCTCGTTTTCCCGAGGCTTATTTTTTTTATGGGATGGCGGACTACCAACATGTGATTCCAGTTCATGCTGATGTTGCCCGGAGGAAGAAGCGGAACTGGTCAGAGCTAGAAGAACTGCATTTTGATAAAGGTGGTTTCATGGATCTGGATCACGAGGATGTTATGATTATAGTGCCTCCAATTTTCGCTCCAAAAGATGTGCCAGAAAATTTAGTCTTAAGACCAGCTACCATGTCGAGTTCGAAAAAGAAACCAGAGGAAGTTGTACAACCCCATTTTGAGATGGACATGGAGCCAGTTCTTGCAATTGATTTTGACATTAAAGAGATTCCTAAGAAAGTGAATTGGGAGGAATACATACCCCAAGGCTCAGATCAGTGGGAGTTACAGATGGTTGTATCTAGAATGTTTGATGAGCGGCCTATATGGTCCAAAAATTCGCTTACCGAACTCTTGCTTGATAAGGGCTTAAGCTTTTCGCACAGCATGCTCAGAAGGCTTCTATCTAGAATTTCTTACTACTTTTCTAGTGGACCATTTCTGAGGTTTTGGATCAAGAAAGGATATGATCCACGCAAAGATCCTAATTCTCGAATTTATCAAAGAATTGATTATCGAGTACCTGTTCCATTACGAAGTTACTGTGATGCTCATTCAGCCAATAAATCAAAACATAGATGGAAGGATATATGTGCCTTTCGTGTTTTCCCTTACAAGTTCCAGACTTCTTTACAGTTTTTCGACCTTGTTGATGATTATATTCAATCAGAAATAAATAAGCCTCCTTTCCGACCAACTTGCACTTCTGGAACTGGGTGGTTCTCACAACACATGATCAATTGTATTAGACAACGTCTTATGGTGCGATATCTATCAGTATTCCCCAAGCCTGGTGCTGAGAATTTACTCAGAGCTGCCACTTTAAAGTTTGAAAAATTGAAGAGGGAGTGCTATAGGCATGCCATGAAGCTCGATGGAGAAGAATGCCAACAAGCTAATTTAGGTTTGGAAGAGAATGAAGAACTTGATAATGGTGAAGATGAAGAGGAGGCAGCTGAGGGTAATGATAGTGATGAAGAATGGGAAGAAGAGCATGATTTGGCTGGAGATAATGAAATGCCTCTGCCATCTGATTCCTACATCAACTTTGAGAATCTTTCAAGGACTCATTTACAGGATCTTTTTGTTAACTTCCCTCCTAATGAAATTGATTGTGACAATGTGCAAGCAAATGGCAGCGAAGAAGAATATCAAATATACGGGGAAGATAGTGAGGACAATTACTCTGATGAATGA
Predicted protein sequences of Glyma.11g082800
>Glyma.11g082800.1.p sequence-type=predicted peptide transcript=Glyma.11g082800.1 locus=Glyma.11g082800 id=Glyma.11g082800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGVIKDGTISGVLPEPQGFMVHYPAYPSSISRAVDTLGGIQAIQKARCSKSNKLELRFRPEDPYSHPAFGELRPTNSLLLKISKTKPPPPVHDAEASSSSTNGEQDQEGSLCADIVARFPEAYFFYGMADYQHVIPVHADVARRKKRNWSELEELHFDKGGFMDLDHEDVMIIVPPIFAPKDVPENLVLRPATMSSSKKKPEEVVQPHFEMDMEPVLAIDFDIKEIPKKVNWEEYIPQGSDQWELQMVVSRMFDERPIWSKNSLTELLLDKGLSFSHSMLRRLLSRISYYFSSGPFLRFWIKKGYDPRKDPNSRIYQRIDYRVPVPLRSYCDAHSANKSKHRWKDICAFRVFPYKFQTSLQFFDLVDDYIQSEINKPPFRPTCTSGTGWFSQHMINCIRQRLMVRYLSVFPKPGAENLLRAATLKFEKLKRECYRHAMKLDGEECQQANLGLEENEELDNGEDEEEAAEGNDSDEEWEEEHDLAGDNEMPLPSDSYINFENLSRTHLQDLFVNFPPNEIDCDNVQANGSEEEYQIYGEDSEDNYSDE*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo