SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.11g078400

Feature Type:gene_model
Chromosome:Gm11
Start:5901802
stop:5904354
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.11g078400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G35000.1AT APX3 JGI N/AIEA
1.11.1.11EC L-ascorbate peroxidase JGI N/AIEA
GO:0006979GO-bp response to oxidative stress JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0004601GO-mf peroxidase activity JGI N/AIEA
GO:0020037GO-mf heme binding JGI N/AIEA
K00434KEGG Glutathione metabolism JGI N/AIEA
PTHR31356PantherFam THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED JGI N/AIEA
PTHR31356:SF8PantherFam L-ASCORBATE PEROXIDASE 6-RELATED JGI N/AIEA
PF00141Pfam Peroxidase JGI N/AIEA

Proteins Associated with Glyma.11g078400
LocusGene SymbolProtein Name
APX-3a2 Ascorbate peroxidase 3 gene a2

Gene model name correspondences to Glyma.11g078400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma11g08320 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.11g078400
>Glyma.11g078400.1 sequence-type=CDS polypeptide=Glyma.11g078400.1.p locus=Glyma.11g078400 id=Glyma.11g078400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAAAGCCTAGAGTTGATGCTGAGTATCTGAAGGAAATCGAGAAGGCTCGTCGTGACCTTCGCGCTCTTATCTCCAACAGAAACTGCGCCCCTCTCATGCTTCGATTAGCGTGGCATGATGCTGGTACTTACGATGCTAAAACAAACACAGGAGGCCCTAATGGTTCTATCAGAAACAGACAAGAGTTGAATCACGCAGCAAACAAGGGACTGGAAACAGCACTTGCCTTCTGTGAGGAAGTGAAGGCCAAACATCCAAAAATTTCATATGCCGACCTTTACCAGCTAGCTGGTGTTGTTGCAGTAGAAGTTACCGGGGGGCCAACTATTAACTTTGTTCCCGGGAGAAAAGATTCATTGGAATCTCCAGCAGAGGGGCGTCTTCCAGATGCCAAACAAGGTGCGTCGCATCTAAGAGATATCTTTTATCGCATGGGTCTAGGTGACAAAGACATTGTGGCTCTATCCGGAGGTCACACTTTGGGTAAGGCACATAAAGATCGTTCTGACTTTCATGGTCAATGGACAAAGGACCCTTTGAAGTTTGATAATTCCTATTTTGTGGAATTGCTGAGAGGGGAGTCAAAAGATTTACTGAAGCTTCCCACAGACAAGGCTCTAGTTGAAGATCCTAATTTCCGCAAGTATGTTGAACTATATGCGAAGGATGAAGATGCTTTTTTCTCAGATTATGCAACCTCACACAAAAAACTCTCAGAGCTGGGCTTTATTTTCAAGAATCATCGTTCCATATTGGCCAAGGGAGTTATAGGAATTGCTATTGTCTTAACCGCCGTGATCTTGGGTTACTTACGTGAACTGAACAAAAAAACCAATTGA
Predicted protein sequences of Glyma.11g078400
>Glyma.11g078400.1.p sequence-type=predicted peptide transcript=Glyma.11g078400.1 locus=Glyma.11g078400 id=Glyma.11g078400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAKPRVDAEYLKEIEKARRDLRALISNRNCAPLMLRLAWHDAGTYDAKTNTGGPNGSIRNRQELNHAANKGLETALAFCEEVKAKHPKISYADLYQLAGVVAVEVTGGPTINFVPGRKDSLESPAEGRLPDAKQGASHLRDIFYRMGLGDKDIVALSGGHTLGKAHKDRSDFHGQWTKDPLKFDNSYFVELLRGESKDLLKLPTDKALVEDPNFRKYVELYAKDEDAFFSDYATSHKKLSELGFIFKNHRSILAKGVIGIAIVLTAVILGYLRELNKKTN*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo