Glyma.11g070500

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Report for Sequence Feature Glyma.11g070500

Feature Type:	gene_model
Chromosome:	Gm11
Start:	5273807
stop:	5275911
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.11g070500

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G39230.1	AT	NmrA-like negative transcriptional regulator family protein	JGI	N/A	IEA
GO:0006694	GO-bp	steroid biosynthetic process	JGI	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	JGI	N/A	IEA
GO:0003854	GO-mf	3-beta-hydroxy-delta5-steroid dehydrogenase activity	JGI	N/A	IEA
GO:0016616	GO-mf	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	JGI	N/A	IEA
PTHR10366	Panther	NAD DEPENDENT EPIMERASE/DEHYDRATASE	JGI	N/A	IEA
PTHR10366:SF62	Panther		JGI	N/A	IEA
PF05368	PFAM	NmrA-like family	JGI	N/A	IEA
PWY-2229	SoyCyc9	superpathway of pterocarpan biosynthesis (via formononetin)	Plant Metabolic Network		ISS
PWY-2463	SoyCyc9	(-)-medicarpin biosynthesis	Plant Metabolic Network		ISS
PWY-5717	SoyCyc9	superpathway of formononetin derivative biosynthesis	Plant Metabolic Network		ISS
GN7V-63955	SoyCyc9-rxn	2'-hydroxyisoflavone reductase	Plant Metabolic Network		ISS

Proteins Associated with Glyma.11g070500

Locus	Gene Symbol	Protein Name
	IFR	isoflavone reductase

Expression Patterns of Glyma.11g070500

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.11g070500 not represented in the dataset	Glyma.11g070500 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.11g070500 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma11g07510	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.11g070500

Limit To All Plant Sequences

>Glyma.11g070500.2 sequence-type=transcript locus=Glyma.11g070500 ID=Glyma.11g070500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATTGGTTGGTTTGGACTACACAGAATTCATGGAGCCGCCGCCGGCCGCAGATCAGGAAATAGATACTTGTTTGTTTGGTGCGTTAAACTTGGAAACAAAAGAAGTGAAATTTTGCATATAGATCAAAGTTGATGGCCCTATAAATACAAATTGAAGTATTGCTATGCATCATCACTAAGCCATTGCTAGTTTGATTACCTATCAAAACCAGAAAAACACACTGCAATTGTTTGGACTAGTTTTAATTTCTTCCAATTCCATGGCTGGGAAAGATAGAATCCTGATTTTGGGACCCACTGGAGCCATTGGAAGGCACATAGTCTGGGCAAGTGTGAAGGCAGGGAACCCAACATTTGTGTTGGTGAGGAACACCCCTGGCTCTAACAACAGGGTCAATCTGGTCAAAGCTGCTAATCCTGAAACCAAGGAAGAGCTCATTGAGAGCTTCAAAAATTCAGGAGTAAATCTAATTCAGggagatatgaatgatcatgagagtctggttaatgcaatcaagcaagttgatgtcgtaatctgtgcatttggtagactactaattgaagaccagttgaagatcattgcagcaataaaagaagctggaaacgtcaagAGATTTTTTCCATCTGAATTTGGATTGGATGTGGATCGTCACGATTCAGTTGACCCAGTTAGAGAAGTTTTCGAGGAAAAAGCAAGAATTCGAAGAATAATTGAAGCCGAAGGAATTCCATACACTTACCTATGTTGTCATGCCTTTACTGGTTACTTCTTACGTAACCTGGCACAGATTGACATCACTGTTCCTCCGAGGGACAAGGTATTCATTCTAGGAGATGGAAATGTGAAAGGAGCGTTTGTGACTGAGGCTGATGTGGGAACTTTGACCATCGAAGCAGCGAATGACCCTAATGCCTTGAACAAAACCGTGCACATAAGACTCCCTAAGAATTATTTGACCATAAATGAGATCATCTCTTTGTGGGAGAACAAAATTGGGAAGACTCTTGAAAAAACTTATGTTTCAGAGGAAAAGGTTCTTAAAGACATTAAGGGTCGGTAACAAATTCATTTTTAAAAATATATGTGAAACTAATTCTTGATTTATAATGTTTTTTTTTGGTTTACTGCAGAGGCTTCTTTTCCAAACAATTACCTGCTGGCATTGTACCACTCACAGCAGATAAAGGGAGATGCAGTGTATGAGATTGACACTGCCAAAGATCTTGAGGCTTCTGAAGCTTATCCTAACGTGGAATACACCACCGTCGATGAATATTTGAATCAGTTTGTCTGATTTTTGAGTAATTGATGCAATTTTTGTTGCTCTGCAAAGTGCTCAATAAAACCTATGCCTTTTCTTTTTTGCGAAATTGGTTGCTTTTGTCCTATGTTTCGGAAACCATCCACATTAATGTAATCTTTTTTTTTTTTACCTTAATAATACTCTAATCTGCGGTCGGAAGCACTGTTTAAATTTTTTTACATCATTCATGAATACGTGTCACTGCTCCATTTTCTGGCGAGGGGTTCACACTGGACTCACACGTGGGTGTGAAAGAGTGATAGCACTCCACAATTATACTCTACAAATTGTTGCATAAAT

Coding sequences of Glyma.11g070500

Limit To All Plant Sequences

>Glyma.11g070500.1 sequence-type=CDS polypeptide=Glyma.11g070500.1.p locus=Glyma.11g070500 ID=Glyma.11g070500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTGGGAAAGATAGAATCCTGATTTTGGGACCCACTGGAGCCATTGGAAGGCACATAGTCTGGGCAAGTGTGAAGGCAGGGAACCCAACATTTGTGTTGGTGAGGAACACCCCTGGCTCTAACAACAGGGTCAATCTGGTCAAAGCTGCTAATCCTGAAACCAAGGAAGAGCTCATTGAGAGCTTCAAAAATTCAGGAGTAAATCTAATTCAGGGAGATATGAATGATCATGAGAGTCTGGTTAATGCAATCAAGCAAGTTGATGTCGTAATCTGTGCATTTGGTAGACTACTAATTGAAGACCAGTTGAAGATCATTGCAGCAATAAAAGAAGCTGGAAACGTCAAGAGATTTTTTCCATCTGAATTTGGATTGGATGTGGATCGTCACGATTCAGTTGACCCAGTTAGAGAAGTTTTCGAGGAAAAAGCAAGAATTCGAAGAATAATTGAAGCCGAAGGAATTCCATACACTTACCTATGTTGTCATGCCTTTACTGGTTACTTCTTACGTAACCTGGCACAGATTGACATCACTGTTCCTCCGAGGGACAAGGTATTCATTCTAGGAGATGGAAATGTGAAAGGAGCGTTTGTGACTGAGGCTGATGTGGGAACTTTGACCATCGAAGCAGCGAATGACCCTAATGCCTTGAACAAAACCGTGCACATAAGACTCCCTAAGAATTATTTGACCATAAATGAGATCATCTCTTTGTGGGAGAACAAAATTGGGAAGACTCTTGAAAAAACTTATGTTTCAGAGGAAAAGGTTCTTAAAGACATTAAGGAGGCTTCTTTTCCAAACAATTACCTGCTGGCATTGTACCACTCACAGCAGATAAAGGGAGATGCAGTGTATGAGATTGACACTGCCAAAGATCTTGAGGCTTCTGAAGCTTATCCTAACGTGGAATACACCACCGTCGATGAATATTTGAATCAGTTTGTCTGA

>Glyma.11g070500.2 sequence-type=CDS polypeptide=Glyma.11g070500.2.p locus=Glyma.11g070500 ID=Glyma.11g070500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTGGGAAAGATAGAATCCTGATTTTGGGACCCACTGGAGCCATTGGAAGGCACATAGTCTGGGCAAGTGTGAAGGCAGGGAACCCAACATTTGTGTTGGTGAGGAACACCCCTGGCTCTAACAACAGGGTCAATCTGGTCAAAGCTGCTAATCCTGAAACCAAGGAAGAGCTCATTGAGAGCTTCAAAAATTCAGGAGTAAATCTAATTCAGGGAGATATGAATGATCATGAGAGTCTGGTTAATGCAATCAAGCAAGTTGATGTCGTAATCTGTGCATTTGGTAGACTACTAATTGAAGACCAGTTGAAGATCATTGCAGCAATAAAAGAAGCTGGAAACGTCAAGAGATTTTTTCCATCTGAATTTGGATTGGATGTGGATCGTCACGATTCAGTTGACCCAGTTAGAGAAGTTTTCGAGGAAAAAGCAAGAATTCGAAGAATAATTGAAGCCGAAGGAATTCCATACACTTACCTATGTTGTCATGCCTTTACTGGTTACTTCTTACGTAACCTGGCACAGATTGACATCACTGTTCCTCCGAGGGACAAGGTATTCATTCTAGGAGATGGAAATGTGAAAGGAGCGTTTGTGACTGAGGCTGATGTGGGAACTTTGACCATCGAAGCAGCGAATGACCCTAATGCCTTGAACAAAACCGTGCACATAAGACTCCCTAAGAATTATTTGACCATAAATGAGATCATCTCTTTGTGGGAGAACAAAATTGGGAAGACTCTTGAAAAAACTTATGTTTCAGAGGAAAAGGTTCTTAAAGACATTAAGGGTCGGTAA

Predicted protein sequences of Glyma.11g070500

Limit To All Plant Sequences

>Glyma.11g070500.1.p sequence-type=predicted peptide transcript=Glyma.11g070500.1 locus=Glyma.11g070500 ID=Glyma.11g070500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAGKDRILILGPTGAIGRHIVWASVKAGNPTFVLVRNTPGSNNRVNLVKAANPETKEELIESFKNSGVNLIQGDMNDHESLVNAIKQVDVVICAFGRLLIEDQLKIIAAIKEAGNVKRFFPSEFGLDVDRHDSVDPVREVFEEKARIRRIIEAEGIPYTYLCCHAFTGYFLRNLAQIDITVPPRDKVFILGDGNVKGAFVTEADVGTLTIEAANDPNALNKTVHIRLPKNYLTINEIISLWENKIGKTLEKTYVSEEKVLKDIKEASFPNNYLLALYHSQQIKGDAVYEIDTAKDLEASEAYPNVEYTTVDEYLNQFV*

>Glyma.11g070500.2.p sequence-type=predicted peptide transcript=Glyma.11g070500.2 locus=Glyma.11g070500 ID=Glyma.11g070500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAGKDRILILGPTGAIGRHIVWASVKAGNPTFVLVRNTPGSNNRVNLVKAANPETKEELIESFKNSGVNLIQGDMNDHESLVNAIKQVDVVICAFGRLLIEDQLKIIAAIKEAGNVKRFFPSEFGLDVDRHDSVDPVREVFEEKARIRRIIEAEGIPYTYLCCHAFTGYFLRNLAQIDITVPPRDKVFILGDGNVKGAFVTEADVGTLTIEAANDPNALNKTVHIRLPKNYLTINEIISLWENKIGKTLEKTYVSEEKVLKDIKGR*

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