Report for Sequence Feature Glyma.11g050300
Feature Type: gene_model
Chromosome: Gm11
Start: 3765453
stop: 3771565
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.11g050300
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G23093.1 AT
Major facilitator superfamily protein
JGI N/A IEA
GO:0015689 GO-bp
molybdate ion transport
EnsemblGenomes N/A IEA
GO:0016020 GO-cc
membrane
EnsemblGenomes N/A IEA
GO:0016021 GO-cc
integral component of membrane
EnsemblGenomes N/A IEA
GO:0015098 GO-mf
molybdate ion transmembrane transporter activity
EnsemblGenomes N/A IEA
KOG4332
KOG
Predicted sugar transporter
JGI N/A IEA
PTHR24003 Panther
MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED
JGI N/A IEA
PTHR24003:SF253 Panther
JGI N/A IEA
PF05631 PFAM
Protein of unknown function (DUF791)
JGI N/A IEA
Expression Patterns of Glyma.11g050300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.11g050300
Paralog Evidence Comments
Glyma.01g191800 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.11g050300 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma11g05370 Wm82.a1.v1.1 IGC As supplied by JGI
Coding sequences of Glyma.11g050300
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.11g050300.1 sequence-type=CDS polypeptide=Glyma.11g050300.1.p locus=Glyma.11g050300 ID=Glyma.11g050300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAGTAGTCGTTGAGAGCTCCGTTTTTTGGGAGCCAAATCCATCCACATACATCTTCATCTTCGTTTGTTGCTGCTTCTCGATCTTCCTTTTCCCTCACGTCTCTAACCTCAACAGAACCTCCACAATCTTCGACCATGGAACCTCTCACTGGTTTCTCCGTTTCCAGCGGAACTTCCTCCTCCATTATTCTCTCGCCTCAGTAATGGAAGGTCTCTGGTCGGTGTTCGGGGAGTATGAATTAGCTTCCTATGGAATCGGAAGGGAAAATATGGTTAAGTCTCTCTGTTACGGATATACGACAGCTCTGTTTGCTGCTCCTTTCCTTGGCGTGCTCTCGGATTTGATAGGTCACAAGAAAGTTAGTTTAATCTTTTGCATCCTACACTTTATTGTTGGTGTATGGAAGAAGATTTCAGAGCCACCAAGCATGTTCATGACTAGTATATGTCTCTCTCTTGCCAATACAATATTTTCATTCAGTTTTGAGACTTGGATGGTCACTCAACATGAAAAGCAAGGGCACAGGCTTGATTCACTTAATGACACATATTGGTTAATGACTTTCTTTGAGTCTGCATGTTTTATTGCCAGCCAGATGTTTGCAAATTGGCTGATTGGTAATAATACAGAAAAAATTACTGCTCCTTCGTCTGCAGTTATCTTCTTTGCTGCCATATGCTTCACTTTTATCACCAGAGGATGGACAGAAAATCCAGGATCAGCATCTCTTAAGGAGTATAGTCGCTCCCTCTATGCATACATTTTAGGTGATAAAAGGATATGGCTGTTGGCATGGGCACAAACTTGCCTTCACTTCTCTATTGGAATTTTTTGGATCCTCTGGGCACCTACTGTGGTGGCTGATGGCCGAGAAGTGCATCTGGGATTGATATATCCATGCTTTCTGGGCTCTAGAATGCTAGGAAGCACTGCATTTCCGTGTCTCACTAGTGGGCCATCATCGCTTAGAACTGAGGACTGCCTTGTTTTTGCATACATTATACTGGCTCTTCTCCTGTCTATTGTGGCCTATGACTATCAGGAAGTTGGGGTTCTGGTGATACTATTTTGCTTGTTTCATGCTTGTGTCGGGTTTGTTTTGCCATCACTTGCTAGATTGAGGACCATGTATGTTCCCAATGAATTGCGTGGTGGGATGATGGGTTTCTCTCTTGCCCCTGCAAATGCAGCTATTCTGCTTTCTGTGGTGCAGGGTGGCTATTATCGGAATGTAGGAAATGCAGCATTGATGGCATTTGGTGTGTGTGGTTTATTGCTAGCAGCTGGTTGCATGCATGCCCTGAAGCAATGGGGGAAGCAACCTTATAACAATTGGCATAAACAGTGA
Predicted protein sequences of Glyma.11g050300
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.11g050300.1.p sequence-type=predicted peptide transcript=Glyma.11g050300.1 locus=Glyma.11g050300 ID=Glyma.11g050300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGVVVESSVFWEPNPSTYIFIFVCCCFSIFLFPHVSNLNRTSTIFDHGTSHWFLRFQRNFLLHYSLASVMEGLWSVFGEYELASYGIGRENMVKSLCYGYTTALFAAPFLGVLSDLIGHKKVSLIFCILHFIVGVWKKISEPPSMFMTSICLSLANTIFSFSFETWMVTQHEKQGHRLDSLNDTYWLMTFFESACFIASQMFANWLIGNNTEKITAPSSAVIFFAAICFTFITRGWTENPGSASLKEYSRSLYAYILGDKRIWLLAWAQTCLHFSIGIFWILWAPTVVADGREVHLGLIYPCFLGSRMLGSTAFPCLTSGPSSLRTEDCLVFAYIILALLLSIVAYDYQEVGVLVILFCLFHACVGFVLPSLARLRTMYVPNELRGGMMGFSLAPANAAILLSVVQGGYYRNVGNAALMAFGVCGLLLAAGCMHALKQWGKQPYNNWHKQ*