Glyma.11g047200

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Report for Sequence Feature Glyma.11g047200

Feature Type:	gene_model
Chromosome:	Gm11
Start:	3526576
stop:	3534650
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.11g047200

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G22910.1	AT	N-acetyl-l-glutamate synthase 1	JGI	N/A	IEA
AT4G37670.2	AT	N-acetyl-l-glutamate synthase 2	JGI	N/A	IEA
GO:0006526	GO-bp	arginine biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0004042	GO-mf	acetyl-CoA:L-glutamate N-acetyltransferase activity	EnsemblGenomes	N/A	IEA
GO:0008080	GO-mf	N-acetyltransferase activity	EnsemblGenomes	N/A	IEA
GO:0008080	GO-mf	N-acetyltransferase activity	JGI	N/A	IEA
KOG2436	KOG	Acetylglutamate kinase/acetylglutamate synthase	JGI	N/A	IEA
PF00583	PFAM	Acetyltransferase (GNAT) family	JGI	N/A	IEA
PF00696	PFAM	Amino acid kinase family	JGI	N/A	IEA
ARGSYN-PWY	SoyCyc9	L-arginine biosynthesis I (via L-ornithine)	Plant Metabolic Network		ISS
ARGSYNBSUB-PWY	SoyCyc9	L-arginine biosynthesis II (acetyl cycle)	Plant Metabolic Network		ISS
GLUTORN-PWY	SoyCyc9	L-ornithine biosynthesis I	Plant Metabolic Network		ISS
GN7V-41618	SoyCyc9-rxn	amino-acid N-acetyltransferase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.11g047200

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.11g047200 not represented in the dataset	Glyma.11g047200 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.11g047200

Paralog	Evidence	Comments
Glyma.01g194700	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.11g047200 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma11g05060	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.11g047200

Limit To All Plant Sequences

>Glyma.11g047200.2 sequence-type=transcript locus=Glyma.11g047200 ID=Glyma.11g047200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CATTTTGTTGAAGGAAGCAGAAGCACATGGCAGTGATATGTCCGCCAAGCCAGGGACAAACTTGGCTTCCCCATGGCCCCAATTCTAATTACCACTTCTTCTCAAGAGGAGGAGTTGGAAGGCGCAGTCGTTCTTATTGTACTTTCAGCTCACCAAAGACCAAAACGAATGCGTTTACGGTCAGAGGCTGCGGCCAGGACTCGGTGGAAGACCATCACTTTGTGAAGGCTCTGAGGGAATCCCAACCTTACATTTCCGTTCATAGGGGCAGACTATTCGTTCTGCTCATATCTGCTCAACTTGTTGCCGGTCCTTACTTCAATCCCATTCTCAAGGATATAGCTTTCCTTAATCACCTAGGAATCCGCTTTGTTCTTGTTCCGGGGACACATGTGCAGATAGACAAGCTTCTGAATGAGAGAGGGTGCCAGCCTATGTATGTTGGTAGATATAGGATAACTGATGATGAATCTCTGGAAGCTGCCATGGAAGCAGCTGGGGGCATAAGATTGATGATAGAAGCAAAACTTTCTCCTGGACCTTCCATATGCAACATTCGCCGTCATGGTGACAATAGTCGATGGCACGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAATGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTAACTCGCATGCGTGAGAGACTTGATGGTGGCTGTGTAGTTGTATTAACCAACTTGGGCTATTCCAGCTCTGGAGAAGTATTAAATTGCAACACCTATGAAGTTGCCACTGCTTGTGCCTTGGCTATAGGGGCAGACAAGCTAATATGCATAATAGATGGTCCAATACTTGATGAGAGTGGACACCTAATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGCTAATTCGTAAACGGGCTAAGCAAAGTGATGCAGCTGCTAACTATGTGAAAGCTGTTGACGAAGAAGGTTTCAACTCTCTTGAGTGTAACAATTTTAATGGAACAGTCAAATCACCACCTATTGGATGTTTTACAGAATGGCATAATGCAACCTTCCATAATGGTGTTGGTTTTGAGAATGGAAATGGCTTAGGGTCCGGTGAGCAAGGTTTTGCTATTGGAGGTCAAGAGCGGCTAAGTCGAATGAATGGCTACCTGTCAGAATTGGCCGCTGCAGCTTTCGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGCTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTACGAAGGCACTCGGACAGCAGAGGTAAAAGATATTTCTGGAATAAAACAACTTATTCATCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGAAGAGCTGTTAAAAACATTGGATTCATTCGTTGTTGTGGAAAGAGAAGGTCACATAATTGCTTGTGCTGCCATTTTTCCTCACTTTGAGGAGAAGTGTGGAGAGGTTGCTTGTATTGCAGTATCTCCTGATTGTCGTGGCCAAGGACAGGGTGACAAATTGCTTGATTATATGGAGAAGAAAGCATCATCTCTTGGATTTAATATGCTTTTCCTTCTTACAACACGTACTGCAGATTGGTTTGTAAGGCGTGGATTTTCAGAATGTTCAATTGATTATATTCCTGAAAAGAAAAGGAGAATGATCAATCTTTCCCGCAATTCTAAGTATTATATGAAGAAGCTTCTGCCAAATATTAGTGGAATTACTGTTGGTGTAAAATCTGCTTCAAGTTAGTACCATTTTATGTTGTTTCCACCAACCAGGAGTGAAGGGTGATTGGAAGCAATATATTAGGCACTTCTATATATAATTGGCTCGTAACAGTGTGGCCTCTGGAATTATTAGTATCTCGTTCAGGTCTTCCATGTGTAAGCATTAAGTTTCTAACTTTCTACTGTTAATATATTGTGAATTACTAAGCTCATGTTATTATCTTGATGAATTACTAAGCTCATGTTAATATTTGTTGATTAGATAGAGAATGTGATTCATAGTTCATACAATTTTGATTTCCTTCTCTCTTTTTTTGACGAAACAATTGTGATTTCCTATTTGTAGGATAATTTATGAAAACAACTCATGATATTTGATTTT

Coding sequences of Glyma.11g047200

Limit To All Plant Sequences

>Glyma.11g047200.1 sequence-type=CDS polypeptide=Glyma.11g047200.1.p locus=Glyma.11g047200 ID=Glyma.11g047200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCACGTTCCTTATGCCTATCCCTTCCAAATACTTCCGGAACCTTGTCTGATTTCAACAAACTATACTCTTCCTCTCATTCTCACCATTTACCAAAACCGAACCTGCAATTTAACTCTAGCTGGGGCCCAGAGGTGCGGCCCGTGACGGCGGCCCATTTGGGTAACCGAAAGAAGCTTAATGCGTTGAGCGAAGATGGAGAGAGCAGCTACCATGGGTCGATGGAGGATAAGCAATTCGTGCGTTCGTTTCGCGAGGCCTGGCCTTACTTGTGGGCCTATCGTGGTAGCACCTTTGTTGTCATTATTTCCGGTGAAATTGTTTCTGGCCCTTTCTTGGATGTCATTCTCAAGGATATAGCTTTCCTTAATCACCTAGGAATCCGCTTTGTTCTTGTTCCGGGGACACATGTGCAGATAGACAAGCTTCTGAATGAGAGAGGGTGCCAGCCTATGTATGTTGGTAGATATAGGATAACTGATGATGAATCTCTGGAAGCTGCCATGGAAGCAGCTGGGGGCATAAGATTGATGATAGAAGCAAAACTTTCTCCTGGACCTTCCATATGCAACATTCGCCGTCATGGTGACAATAGTCGATGGCACGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAATGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTAACTCGCATGCGTGAGAGACTTGATGGTGGCTGTGTAGTTGTATTAACCAACTTGGGCTATTCCAGCTCTGGAGAAGTATTAAATTGCAACACCTATGAAGTTGCCACTGCTTGTGCCTTGGCTATAGGGGCAGACAAGCTAATATGCATAATAGATGGTCCAATACTTGATGAGAGTGGACACCTAATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGCTAATTCGTAAACGGGCTAAGCAAAGTGATGCAGCTGCTAACTATGTGAAAGCTGTTGACGAAGAAGGTTTCAACTCTCTTGAGTGTAACAATTTTAATGGAACAGTCAAATCACCACCTATTGGATGTTTTACAGAATGGCATAATGCAACCTTCCATAATGGTGTTGGTTTTGAGAATGGAAATGGCTTAGGGTCCGGTGAGCAAGGTTTTGCTATTGGAGGTCAAGAGCGGCTAAGTCGAATGAATGGCTACCTGTCAGAATTGGCCGCTGCAGCTTTCGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGCTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTACGAAGGCACTCGGACAGCAGAGGTAAAAGATATTTCTGGAATAAAACAACTTATTCATCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGAAGAGCTGTTAAAAACATTGGATTCATTCGTTGTTGTGGAAAGAGAAGGTCACATAATTGCTTGTGCTGCCATTTTTCCTCACTTTGAGGAGAAGTGTGGAGAGGTTGCTTGTATTGCAGTATCTCCTGATTGTCGTGGCCAAGGACAGGGTGACAAATTGCTTGATTATATGGAGAAGAAAGCATCATCTCTTGGATTTAATATGCTTTTCCTTCTTACAACACGTACTGCAGATTGGTTTGTAAGGCGTGGATTTTCAGAATGTTCAATTGATTATATTCCTGAAAAGAAAAGGAGAATGATCAATCTTTCCCGCAATTCTAAGTATTATATGAAGAAGCTTCTGCCAAATATTAGTGGAATTACTGTTGGTGTAAAATCTGCTTCAAGTTAG

>Glyma.11g047200.2 sequence-type=CDS polypeptide=Glyma.11g047200.2.p locus=Glyma.11g047200 ID=Glyma.11g047200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAGTGATATGTCCGCCAAGCCAGGGACAAACTTGGCTTCCCCATGGCCCCAATTCTAATTACCACTTCTTCTCAAGAGGAGGAGTTGGAAGGCGCAGTCGTTCTTATTGTACTTTCAGCTCACCAAAGACCAAAACGAATGCGTTTACGGTCAGAGGCTGCGGCCAGGACTCGGTGGAAGACCATCACTTTGTGAAGGCTCTGAGGGAATCCCAACCTTACATTTCCGTTCATAGGGGCAGACTATTCGTTCTGCTCATATCTGCTCAACTTGTTGCCGGTCCTTACTTCAATCCCATTCTCAAGGATATAGCTTTCCTTAATCACCTAGGAATCCGCTTTGTTCTTGTTCCGGGGACACATGTGCAGATAGACAAGCTTCTGAATGAGAGAGGGTGCCAGCCTATGTATGTTGGTAGATATAGGATAACTGATGATGAATCTCTGGAAGCTGCCATGGAAGCAGCTGGGGGCATAAGATTGATGATAGAAGCAAAACTTTCTCCTGGACCTTCCATATGCAACATTCGCCGTCATGGTGACAATAGTCGATGGCACGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAATGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTAACTCGCATGCGTGAGAGACTTGATGGTGGCTGTGTAGTTGTATTAACCAACTTGGGCTATTCCAGCTCTGGAGAAGTATTAAATTGCAACACCTATGAAGTTGCCACTGCTTGTGCCTTGGCTATAGGGGCAGACAAGCTAATATGCATAATAGATGGTCCAATACTTGATGAGAGTGGACACCTAATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGCTAATTCGTAAACGGGCTAAGCAAAGTGATGCAGCTGCTAACTATGTGAAAGCTGTTGACGAAGAAGGTTTCAACTCTCTTGAGTGTAACAATTTTAATGGAACAGTCAAATCACCACCTATTGGATGTTTTACAGAATGGCATAATGCAACCTTCCATAATGGTGTTGGTTTTGAGAATGGAAATGGCTTAGGGTCCGGTGAGCAAGGTTTTGCTATTGGAGGTCAAGAGCGGCTAAGTCGAATGAATGGCTACCTGTCAGAATTGGCCGCTGCAGCTTTCGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGCTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTACGAAGGCACTCGGACAGCAGAGGTAAAAGATATTTCTGGAATAAAACAACTTATTCATCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGAAGAGCTGTTAAAAACATTGGATTCATTCGTTGTTGTGGAAAGAGAAGGTCACATAATTGCTTGTGCTGCCATTTTTCCTCACTTTGAGGAGAAGTGTGGAGAGGTTGCTTGTATTGCAGTATCTCCTGATTGTCGTGGCCAAGGACAGGGTGACAAATTGCTTGATTATATGGAGAAGAAAGCATCATCTCTTGGATTTAATATGCTTTTCCTTCTTACAACACGTACTGCAGATTGGTTTGTAAGGCGTGGATTTTCAGAATGTTCAATTGATTATATTCCTGAAAAGAAAAGGAGAATGATCAATCTTTCCCGCAATTCTAAGTATTATATGAAGAAGCTTCTGCCAAATATTAGTGGAATTACTGTTGGTGTAAAATCTGCTTCAAGTTAG

Predicted protein sequences of Glyma.11g047200

Limit To All Plant Sequences

>Glyma.11g047200.1.p sequence-type=predicted peptide transcript=Glyma.11g047200.1 locus=Glyma.11g047200 ID=Glyma.11g047200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MARSLCLSLPNTSGTLSDFNKLYSSSHSHHLPKPNLQFNSSWGPEVRPVTAAHLGNRKKLNALSEDGESSYHGSMEDKQFVRSFREAWPYLWAYRGSTFVVIISGEIVSGPFLDVILKDIAFLNHLGIRFVLVPGTHVQIDKLLNERGCQPMYVGRYRITDDESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVTRMRERLDGGCVVVLTNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGHLIRFLPLQEADMLIRKRAKQSDAAANYVKAVDEEGFNSLECNNFNGTVKSPPIGCFTEWHNATFHNGVGFENGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIHPLEASGILVKRTDEELLKTLDSFVVVEREGHIIACAAIFPHFEEKCGEVACIAVSPDCRGQGQGDKLLDYMEKKASSLGFNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRMINLSRNSKYYMKKLLPNISGITVGVKSASS*

>Glyma.11g047200.2.p sequence-type=predicted peptide transcript=Glyma.11g047200.2 locus=Glyma.11g047200 ID=Glyma.11g047200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAVICPPSQGQTWLPHGPNSNYHFFSRGGVGRRSRSYCTFSSPKTKTNAFTVRGCGQDSVEDHHFVKALRESQPYISVHRGRLFVLLISAQLVAGPYFNPILKDIAFLNHLGIRFVLVPGTHVQIDKLLNERGCQPMYVGRYRITDDESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVTRMRERLDGGCVVVLTNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGHLIRFLPLQEADMLIRKRAKQSDAAANYVKAVDEEGFNSLECNNFNGTVKSPPIGCFTEWHNATFHNGVGFENGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIHPLEASGILVKRTDEELLKTLDSFVVVEREGHIIACAAIFPHFEEKCGEVACIAVSPDCRGQGQGDKLLDYMEKKASSLGFNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRMINLSRNSKYYMKKLLPNISGITVGVKSASS*

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