SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.11g015900

Feature Type:gene_model
Chromosome:Gm11
Start:1107699
stop:1112621
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.11g015900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G12410.1AT JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
K06963KEGG Transfer RNA biogenesis JGI N/AIEA
PTHR13452PantherFam THUMP DOMAIN CONTAINING PROTEIN 1-RELATED JGI N/AIEA
PTHR13452:SF10PantherFam THUMP DOMAIN-CONTAINING PROTEIN 1 JGI N/AIEA
PF02926Pfam THUMP domain JGI N/AIEA

Gene model name correspondences to Glyma.11g015900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma11g01830 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.11g015900
>Glyma.11g015900.2 sequence-type=CDS polypeptide=Glyma.11g015900.2.p locus=Glyma.11g015900 id=Glyma.11g015900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGCCTGATGCTGCCGCCGCCAACGGCAAAAAGAGAAGACGCTATCTTCCTCATAACAAGGCAGTGAAGAAGAAGGGTTCGTACCCTCTGCGGCCAGGCGTGCAAGGTTTTTTCATCACTTGCGATGGCGGCAGAGAACACCAAGCCTCTCGTGAAGCTCTCAATATTCTCGATTCCTTTTATGAAGAGCTAGTTGATGGGGAACATTCAAGTGTAAAGGAGTTACCCAGCAAACCTTTAAATAAAAAAATCACGTTTGCAGATTCTGACTCTTCTAGTAGCGATGATGATGATGATGATGATGAGGAGGAGGAGGTGCAGGAGGGGGATGAGGAAAAGGGGGACAAAAAGCCAAAATTGGATACTTCTAATGACGACAACACCAGTCACGATGATGGAGTACCTGAAAAATCAGATCCTCATAAAGTTGATGAACCACACACTCAGGAAGTAGATGAAACTTGTGATAATAAAGGTGCGAATGACAATCTTAAGACTACTAAAGGGACAGCTGATGGTCTACCAGCTGTGAAACAGTGCTGCAAAACAAACGTGCCTGCATGTAATTTTAGTGACAAAGTGGAACAGAAGTCTATTGATAAGTTAATTGAAGAAGAATTCAAAGAATTGGGAGACAAGAATAAGAGGTGCTTTGTCAAGCTTGATTCTGGTTGTAATGGTGTAGTATTTGTTCAAATGCGGAAGAAAGATGGAGACCGAAGCCCCAAGGATATAGTTCATCGGATAGTGACATCAGCAGCATCAACAGGGAAACATATGTCAAGGTTTATTTTGAGAATTTTGCCAATTGAAATCGCATGTTATGCTTCAAAGGAGGAAATTTCAAGAGCAATCAAGCCTCTTGTGGAACAGTACTTTCCTGTGGAAACTCAAAATCCACACAAGTTTGCTGTACTGTATGAGGCACGGGCAAATACTGGTGTTGACAGGATGGAAATCATCGATGCTGTGGCAAAGTCAGTTCCTGGACCCCATAAAGTTGATCTAAAAAATCCTGATAAAACTATAGTAGTTGAAATTGCCAGGACTGTGTGCTTGATCGGGGTCATCGAGAAATACAAGGAACTTTCCAAGTATAATCTGAGGCAGTTAACATCTCGTAAAGACTGA
Predicted protein sequences of Glyma.11g015900
>Glyma.11g015900.2.p sequence-type=predicted peptide transcript=Glyma.11g015900.2 locus=Glyma.11g015900 id=Glyma.11g015900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAPDAAAANGKKRRRYLPHNKAVKKKGSYPLRPGVQGFFITCDGGREHQASREALNILDSFYEELVDGEHSSVKELPSKPLNKKITFADSDSSSSDDDDDDDEEEEVQEGDEEKGDKKPKLDTSNDDNTSHDDGVPEKSDPHKVDEPHTQEVDETCDNKGANDNLKTTKGTADGLPAVKQCCKTNVPACNFSDKVEQKSIDKLIEEEFKELGDKNKRCFVKLDSGCNGVVFVQMRKKDGDRSPKDIVHRIVTSAASTGKHMSRFILRILPIEIACYASKEEISRAIKPLVEQYFPVETQNPHKFAVLYEARANTGVDRMEIIDAVAKSVPGPHKVDLKNPDKTIVVEIARTVCLIGVIEKYKELSKYNLRQLTSRKD*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo